D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	835,887	T→G	N281K (AAT→AAG)	SAUSA300_RS04040 →	RNase adaptor protein RapZ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	835,887	0	T	G	100.0%	1721.3 / NA	609	N281K (AAT→AAG)	SAUSA300_RS04040	RNase adaptor protein RapZ
Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (534/75); total (534/75)

Only 100 of 609 total aligned reads displayed.

AGAAGGGAAATCTCAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAATGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGAAAAAATGAGACAAATAAAAGTTGTACTTATCGGTG  >  NC_007793/835794‑835983

tcaagGGAAATCTCAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTa                                                                                            >  1:2792620/3‑100 (MQ=255)

ctaggggAAATCTCAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTa                                                                                            >  1:5967660/5‑100 (MQ=255)

ctaagGGAAATCTCAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAgaa                                                                                            >  1:1849737/3‑98 (MQ=255)

  tagGGAAATCTCAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTAtt                                                                                          >  1:559301/2‑100 (MQ=255)

  tagGGAAATCTCAATTAGTAATTGCCATCGATTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTAtt                                                                                          >  1:6450277/2‑100 (MQ=255)

  cagGGAAATCTCAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGATCGACCAGGTAATTATCTAAAGGAAGGAtt                                                                                          >  1:4729089/2‑100 (MQ=255)

  aagGGAAATCTCAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTAtt                                                                                          >  1:2864511/1‑100 (MQ=255)

             cAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTGATTATCTAAAGGAAGTATTTGAATATAATg                                                                               >  1:500928/1‑100 (MQ=255)

             cAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATg                                                                               >  1:5200722/1‑100 (MQ=255)

             cAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATg                                                                               >  1:2764588/1‑100 (MQ=255)

             cAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATg                                                                               >  1:2431877/1‑100 (MQ=255)

             cAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATg                                                                               >  1:2930373/1‑100 (MQ=255)

             cAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATg                                                                               >  1:2957153/1‑100 (MQ=255)

             cAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATg                                                                               >  1:1766407/1‑100 (MQ=255)

             cAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATg                                                                               >  1:5925822/1‑100 (MQ=255)

             cAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATg                                                                               >  1:4825462/1‑100 (MQ=255)

             cAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATg                                                                               >  1:349197/1‑100 (MQ=255)

             cAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGGATTTGAATATAATg                                                                               >  1:6275811/1‑100 (MQ=255)

                    ttgttGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTAtgt                                                                        >  1:3104086/4‑100 (MQ=255)

                      aTTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGc                                                                      >  1:4071603/1‑100 (MQ=255)

                       ttGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGca                                                                     >  1:2346907/1‑100 (MQ=255)

                       ttGCCATCGGTTGTACGGGCGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGca                                                                     >  1:136632/1‑100 (MQ=255)

                        tGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGcat                                                                    >  1:1000568/1‑100 (MQ=255)

                        tGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGcat                                                                    >  1:3734774/1‑100 (MQ=255)

                        tGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGcat                                                                    >  1:5538212/1‑100 (MQ=255)

                        tGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGcat                                                                    >  1:5751449/1‑100 (MQ=255)

                        tGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGcat                                                                    >  1:2262726/1‑100 (MQ=255)

                        tGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGcat                                                                    >  1:1997171/1‑100 (MQ=255)

                        tGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGcat                                                                    >  1:1685472/1‑100 (MQ=255)

                        tGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGcat                                                                    >  1:4430652/1‑100 (MQ=255)

                        tGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATATGcat                                                                    >  1:2037473/1‑100 (MQ=255)

                         gCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGcatc                                                                   >  1:4240949/1‑100 (MQ=255)

                         gCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGcatc                                                                   >  1:667044/1‑100 (MQ=255)

                         gCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGcatc                                                                   >  1:4572465/1‑100 (MQ=255)

                         gCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGcatc                                                                   >  1:3545594/1‑100 (MQ=255)

                          ccATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGACGTATTTGAATATAATGTTTATGTGcatca                                                                  >  1:5692698/1‑100 (MQ=255)

                               tgatGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAggg                                                             >  1:6215422/4‑100 (MQ=255)

                                gctGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGa                                                            >  1:2704531/3‑100 (MQ=255)

                                 ttGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGAc                                                           >  1:5855041/1‑100 (MQ=255)

                                 gggTACGGGTGGTCAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGAc                                                           >  1:5273592/3‑100 (MQ=255)

                                 aggTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGAc                                                           >  1:1733169/3‑100 (MQ=255)

                                  tGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACg                                                          >  1:4841587/1‑100 (MQ=255)

                                  ataaCGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACg                                                          >  1:5451441/4‑100 (MQ=255)

                                   gTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGc                                                         >  1:856542/1‑100 (MQ=255)

                                   gTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGc                                                         >  1:3026033/1‑100 (MQ=255)

                                   gTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGc                                                         >  1:3850812/1‑100 (MQ=255)

                                   gTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGc                                                         >  1:5407563/1‑100 (MQ=255)

                                   gTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGc                                                         >  1:258905/1‑100 (MQ=255)

                                   gTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGc                                                         >  1:6028860/1‑100 (MQ=255)

                                   gTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGc                                                         >  1:822501/1‑100 (MQ=255)

                                   gTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGc                                                         >  1:4460398/1‑100 (MQ=255)

                                   ctctgggTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGc                                                         >  1:4327721/5‑100 (MQ=255)

                                        ggTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACata                                                    >  1:755888/1‑100 (MQ=255)

                                          tGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATAtt                                                  >  1:5125006/1‑100 (MQ=255)

                                           ggACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATCTAATGTTTATGTGCATCATAGGGACGCACATATTg                                                 >  1:4753293/1‑100 (MQ=255)

                                           ggACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTg                                                 >  1:3354929/1‑100 (MQ=255)

                                            gACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGa                                                >  1:4127477/1‑100 (MQ=255)

                                                   ccGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGc                                         <  1:4162141/99‑1 (MQ=255)

                                                   ccGATCTGGGGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTggg                                         <  1:3268908/99‑2 (MQ=255)

                                                    cGATCTGTGGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGAGGCg                                        <  1:1268352/100‑1 (MQ=255)

                                                    cGATCTGTAGCGTTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGca                                        <  1:2141344/100‑2 (MQ=255)

                                                    cGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGca                                        <  1:141842/100‑2 (MQ=255)

                                                    cGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGca                                        <  1:4935169/100‑2 (MQ=255)

                                                    cGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTAGCg                                        <  1:6482803/100‑1 (MQ=255)

                                                    cGATCTGGGGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCg                                        <  1:930020/100‑1 (MQ=255)

                                                    cGATCTGGAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGca                                        <  1:2388481/100‑2 (MQ=255)

                                                     gATCTGGAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCgc                                       <  1:3403709/100‑2 (MQ=255)

                                                      tctgttAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCgag                                      <  1:1902036/95‑1 (MQ=255)

                                                      ctCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGCATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCgag                                      >  1:6527293/2‑100 (MQ=255)

                                                        cTGTAGCATTAGCAGAACGACGAGGTAATCATCTAAAGGAAGAATTTGAATATAATGTTTATGTCCATCATAGGGACGCACATATTGAAAGAGGCgagat                                    >  1:5660959/1‑99 (MQ=255)

                                                          gTAGCGTTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCgagatcg                                  >  1:3196880/1‑97 (MQ=255)

                                                          gTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCGCATATTGAAAGTGGCGAGaaaa                                  >  1:1114069/1‑100 (MQ=255)

                                                          gTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAATTGGCgagatcg                                  >  1:6094679/1‑97 (MQ=255)

                                                          gTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAATTGGCgagatcg                                  >  1:3461797/1‑97 (MQ=255)

                                                          gTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCggagatc                                  >  1:3764541/1‑94 (MQ=255)

                                                          gTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCgagatcg                                  >  1:4373415/1‑97 (MQ=255)

                                                          gTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCgagatcg                                  >  1:2188643/1‑97 (MQ=255)

                                                          gTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGaaaa                                  >  1:4493163/1‑100 (MQ=255)

                                                          gTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGaaaa                                  >  1:1617059/1‑100 (MQ=255)

                                                          gTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGACgagatcg                                  >  1:4013558/1‑97 (MQ=255)

                                                          gTAGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGGGGCgagatcg                                  >  1:4306908/1‑97 (MQ=255)

                                                            aGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCaagatcgga                                >  1:5087624/1‑95 (MQ=255)

                                                            aGCATTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAACTGGCgagatcgga                                >  1:5796668/1‑95 (MQ=255)

                                                              cgttAGCAGAACGGCTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGAAAAAATg                              <  1:395229/98‑1 (MQ=255)

                                                               actggCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGAAAAAATga                             >  1:1574532/5‑100 (MQ=255)

                                                               aTTAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGAAAAAATga                             >  1:2489615/1‑100 (MQ=255)

                                                                 tAGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGAAAAAATgaga                           >  1:6599434/1‑100 (MQ=255)

                                                                  aGCAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATTCGCATCATAGGGACGCACATATTGAAAGCGGCGAGAAAAAATGAGAc                          >  1:3639514/1‑100 (MQ=255)

                                                                    cAGAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGAAAAAATGAGACaa                        >  1:6400847/1‑100 (MQ=255)

                                                                      gAACGACTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGAAAAAATGAGACAAAt                      >  1:5377427/1‑100 (MQ=255)

                                                                           aCTAGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGAAAAAATGAGACAAATAAAAg                 >  1:4652615/1‑100 (MQ=255)

                                                                              aGGTAATTATCTAAAGGACGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGAAAAAATGAGACAAATAAAAGTTg              >  1:2290454/1‑100 (MQ=255)

                                                                              aGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAGAGTGGCGAGAAAAAATGAGACAAATAAAAGTTg              >  1:119171/1‑100 (MQ=255)

                                                                              aGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGAAAAAATGAGACAAATAAAAGTTg              >  1:6144321/1‑100 (MQ=255)

                                                                              aGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGAAAAAATGAGACAAATAAAAGTTg              >  1:718722/1‑100 (MQ=255)

                                                                              aGGTAATTATCTAAAGGAAGTATTTGAATATAATGTTTATGAGCATCATAGGGACGCACATATTGAAAGCGGCGAGAAAAAATGAGACAAATAAAAGTTg              >  1:1958734/1‑100 (MQ=255)

                                                                                  aaTTATCTAAAGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGAAAAAATGAGACAAATAAAAGTTGTACt          >  1:6323504/1‑100 (MQ=255)

                                                                                          aaaGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGAAAAAATGAGACAAATAAAAGTTGTACTTATCggtg  >  1:3602875/1‑100 (MQ=255)

                                                                                          aaaGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGAAAAAATGAGACAAATAAAAGTTGTACTTATCggtg  >  1:1531277/1‑100 (MQ=255)

                                                                                          aaaGGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGAAAAAATGAGACAAATAAAAGTTGTACTTATCggtg  >  1:3314769/1‑100 (MQ=255)

AGAAGGGAAATCTCAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACATCGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAATGAAGTATTTGAATATAATGTTTATGTGCATCATAGGGACGCACATATTGAAAGTGGCGAGAAAAAATGAGACAAATAAAAGTTGTACTTATCGGTG  >  NC_007793/835794‑835983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`