Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 796,278 C→G intergenic (+39/‑79) SAUSA300_RS03845 → / → SAUSA300_RS03850 ribonucleotide‑diphosphate reductase/ribonucleotide‑diphosphate reductase subunit beta

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_007793796,2780CG99.9% 4423.4 / NA 1573intergenic (+39/‑79)SAUSA300_RS03845/SAUSA300_RS03850ribonucleotide‑diphosphate reductase/ribonucleotide‑diphosphate reductase subunit beta
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (1539/31);  minor base T (2/0);  total (1542/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01

Only 100 of 1593 total aligned reads displayed.

TTACTATACTAGAAATAAATTATTAAGTGTAGAAGAATGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGCTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGATAGCTGTTAATTGGAA  >  NC_007793/796182‑796376
                                                                                                |                                                                                                  
ttACTATACTAGAAATAAATTATTAAGTGTAGAAGAATGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGgtct                                                                                                 >  1:1439947/1‑100 (MQ=255)
     atactaGAAATAAATTATTAAGTGTAGAAGAATGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAAtt                                                                                            >  1:3017058/1‑100 (MQ=255)
     atactaGAAATAAATTATTAAGTGTAGAAGAATGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAAtt                                                                                            >  1:5065353/1‑100 (MQ=255)
      gcctaGAAATAAATTATTAAGTGTAGAAGAATGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTa                                                                                           >  1:2860703/3‑100 (MQ=255)
       actaGAAATAAATTATTAAGTGTAGAAGAATGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAGTTAg                                                                                          >  1:4215795/1‑100 (MQ=255)
       actaGAAATAAATTATTAAGTGTAGAAGAATGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAg                                                                                          >  1:3932675/1‑100 (MQ=255)
       actaGAAATAAATTATTAAGTGTAGAAGAATGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAg                                                                                          >  1:6130463/1‑100 (MQ=255)
          aGAAATAAATTATTAAGTGTAGAAGAATGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAg                                                                                       >  1:2612172/1‑100 (MQ=255)
          aGAAATAAATTATTAAGTGTAGAAGAATGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAg                                                                                       >  1:4525494/1‑100 (MQ=255)
                         ggtgtAGAAGAATGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTa                                                                        >  1:5954260/2‑100 (MQ=255)
                         cctgtAGAAGAATGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTa                                                                        >  1:5639731/3‑100 (MQ=255)
                          gtgtAGAAGAATGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTAt                                                                       >  1:150060/1‑100 (MQ=255)
                                   caTGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGCCTGAATTAGCAGATGATTAGACTGCTATGTCTGTAtt                                                              >  1:3368864/2‑100 (MQ=255)
                                   aaTGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTAtt                                                              >  1:1387559/1‑100 (MQ=255)
                                   aaTGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTAtt                                                              >  1:1682331/1‑100 (MQ=255)
                                    aTGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGCCTGAATTAGCAGATGATTAGACTGCTATGTCTGTAttt                                                             >  1:6392415/1‑100 (MQ=255)
                                     tGTACAAGTTGATCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTg                                                            >  1:4935623/1‑100 (MQ=255)
                                      gTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGt                                                           >  1:3858888/1‑100 (MQ=255)
                                      gTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGt                                                           >  1:6327557/1‑100 (MQ=255)
                                      gTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGt                                                           >  1:5417000/1‑100 (MQ=255)
                                        aCAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCa                                                         >  1:623721/1‑100 (MQ=255)
                                           aGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAatt                                                      >  1:1943132/1‑100 (MQ=255)
                                               gttCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTg                                                  >  1:266093/1‑100 (MQ=255)
                                                    atctaCCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTCTTTGTCAATTATTGAGTaa                                             >  1:2797149/1‑100 (MQ=255)
                                                    atctaACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTaa                                             >  1:2892556/1‑100 (MQ=255)
                                                    atctaACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTaa                                             >  1:5841300/1‑100 (MQ=255)
                                                    atctaACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTaa                                             >  1:2322772/1‑100 (MQ=255)
                                                    atctaACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTaa                                             >  1:245939/1‑100 (MQ=255)
                                                    atctaACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTaa                                             >  1:4421926/1‑100 (MQ=255)
                                                    atctaACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTaa                                             >  1:1792636/1‑100 (MQ=255)
                                                    atctaACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTaa                                             >  1:741957/1‑100 (MQ=255)
                                                    atctaACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTaa                                             >  1:5692164/1‑100 (MQ=255)
                                                    atctaACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTaa                                             >  1:5323077/1‑100 (MQ=255)
                                                    atctaACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTaa                                             >  1:547758/1‑100 (MQ=255)
                                                    atctaACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATCGAGTaa                                             >  1:783448/1‑100 (MQ=255)
                                                    atctaACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATCTGTCAATTATTGAGTaa                                             >  1:6629851/1‑100 (MQ=255)
                                                      ctaACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTTAGTAACa                                           >  1:4592416/1‑100 (MQ=255)
                                                      ctaACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACa                                           >  1:4714280/1‑100 (MQ=255)
                                                       caaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAt                                          >  1:3093600/2‑100 (MQ=255)
                                                        aaCAATTATATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:5726022/1‑100 (MQ=255)
                                                        aaCAATTACATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGGTTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:588186/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGGATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:3498731/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGCGTAACAtt                                         >  1:1014210/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACaga                                         >  1:3565954/1‑98 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACaga                                         >  1:4814070/1‑98 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:6578760/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:5548715/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:1134748/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:1205200/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:5271115/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:5227692/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:827201/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:512005/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:131003/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:502614/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:1614691/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:691128/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:4886702/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:4758694/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:6078058/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:464695/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:2134017/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:2197234/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:4481513/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:6519040/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:4267535/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:4140424/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:2945030/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:3201954/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:344338/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:3905957/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:618929/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtc                                         >  1:2397019/1‑99 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtc                                         >  1:253574/1‑99 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAta                                         >  1:931548/1‑99 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGCCTGTATTTGTCAATTATTGAGAAACAtt                                         >  1:1257059/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGGACTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACAtt                                         >  1:4065312/1‑100 (MQ=255)
                                                        aaCAATTAAATGTTGAAAATGACAAACAGCCAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTAGTCAATTATTGTGTAACAtt                                         >  1:5177073/1‑100 (MQ=255)
                                                             ttAAATGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACagg                                    <  1:2011174/100‑1 (MQ=255)
                                                               tgaTGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCTGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACaggag                                  >  1:2253712/3‑100 (MQ=255)
                                                               aaaTGTTGAAAATGACAAACAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACaggaa                                  <  1:6014620/100‑2 (MQ=255)
                                                                            ggccgccAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCa                     >  1:4008169/7‑100 (MQ=255)
                                                                                aaCAGCTAATCATCTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGAt                 <  1:1061466/100‑1 (MQ=255)
                                                                                          cttcTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGATAGCTGTTatt       >  1:1740386/3‑98 (MQ=255)
                                                                                            tcTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAATATTACAGGAGGAAATTATATTCATGATAGCTGTTagatc     >  1:156988/1‑96 (MQ=255)
                                                                                            tcTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGATAGCTGtagatcg     >  1:5779012/1‑94 (MQ=255)
                                                                                            tcTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGATAGCTGTTAATTg     >  1:877390/1‑100 (MQ=255)
                                                                                            tcTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGATAACTgagatcgg     >  1:3144034/1‑93 (MQ=255)
                                                                                             cTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTATAGGAGGAAATTATATTCATGATAGCTGTTAATTgg    >  1:3678131/1‑100 (MQ=255)
                                                                                             cTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGCTAGCTGTTagatcg    >  1:4994481/1‑95 (MQ=255)
                                                                                             cTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGATAGcaattagatcg    >  1:551108/1‑90 (MQ=255)
                                                                                             cTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGATAGCTggaagatcg    >  1:3304862/1‑92 (MQ=255)
                                                                                             cTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGATAGCTgcagatcgg    >  1:3780238/1‑92 (MQ=255)
                                                                                             cTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGATAGCTGtagatcgg    >  1:3604417/1‑93 (MQ=255)
                                                                                             cTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGATAGCTGTTagatcg    >  1:6445572/1‑95 (MQ=255)
                                                                                             cTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGATAGCTGTTaagatc    >  1:373861/1‑96 (MQ=255)
                                                                                             cTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGATAGCTGTTAATTgg    >  1:2065453/1‑100 (MQ=255)
                                                                                             cTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGATAGCTGTTAATTgg    >  1:4369063/1‑100 (MQ=255)
                                                                                             cTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGATAGCTGTTAATTgg    >  1:1881752/1‑100 (MQ=255)
                                                                                             cTGGTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGATAGCTGTTAATTgg    >  1:2729141/1‑100 (MQ=255)
                                                                                                |                                                                                                  
TTACTATACTAGAAATAAATTATTAAGTGTAGAAGAATGTACAAGTTGTTCTATCTAACAATTAAATGTTGAAAATGACAAACAGCTAATCATCTGCTCTGAATTAGCAGATGATTAGACTGCTATGTCTGTATTTGTCAATTATTGAGTAACATTACAGGAGGAAATTATATTCATGATAGCTGTTAATTGGAA  >  NC_007793/796182‑796376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑