| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 785,958 | C→A | intergenic (+220/‑20) | SAUSA300_RS03800 → / → SAUSA300_RS03805 | ABC transporter permease/histidinol‑phosphate aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 785,958 | 0 | C | A | 100.0% | 29.4 / NA | 13 | intergenic (+220/‑20) | SAUSA300_RS03800/SAUSA300_RS03805 | ABC transporter permease/histidinol‑phosphate aminotransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (12/1); total (12/1) | |||||||||||
AATGTAAGCTATTATGATGTGAAAATAGTAGCATTGCATTTTAGAAACATAGAGCGATATAATGAATATAAGTTTTTTGAAATTTCAGTTAATTCTAAGGAGGTTGTTTTTATTATGAAAGAACAACTTAATCAACTATCAGCATATCAGCCTGGTTTATCTCCAAGGG > NC_007793/785864‑786032 | aaTGTAAGCTATTATGATGTGAAAATAGTAGCATTGCATTTTAGAAACATAGAGCGATATAATGAATATAAGTTTTTTGAAATTTCAGTTAATTATAagg < 1:3456467/100‑1 (MQ=255) aaGCTATTATGATGTGAAAATAGTAGCATTGCATTTTAGAAACATAGAGCGATATAATGAATATAAGTTTTTTGAAATTTCAGTTAATTATAaggagatc > 1:843165/1‑97 (MQ=255) tAGAAACATAGAGCGATATAATGAATATAAGTTTTTTGAAATTTCAGTTAATTATAAGGAGGTTGTTTTTATTATGAAAGAACAACTTAATCAACTATCa > 1:4678912/1‑100 (MQ=255) tAGAAACATAGAGCGATATAATGAATATAAGTTTTTTGAAATTTCAGTTAATTATAAGGAGGTTGTTTTTATTATGAAAGAACAACTTAATCAACTATCa > 1:5995682/1‑100 (MQ=255) agtggcctAGAGCGATATAATGAATATAAGTTTTTTGAAATTTCAGTTAATTATAAGGAGGTTGTTTTTATTATGAAAGAACAACTTAATCAACTATCAg > 1:6243114/8‑100 (MQ=255) aGAAACATAGAGCGATATAATGAATATAAGTTTTTTGAAATTTCAGTTAATTATAAGGAGGTTGTTTTTATTATGAAAGAACAACTTAATCAACTATCAg > 1:2059151/1‑100 (MQ=255) aGAAACATAGAGCGATATAATGAATATAAGTTTTTTGAAATTTCAGTTAATTATAAGGAGGTTGTTTTTATTATGAAAGAACAACTTAATCAACTATCAg > 1:2557539/1‑100 (MQ=255) ctAGAGCGATATAATGAATATAAGTTTTTTGAAATTTCAGTTAATTATAAGGAGGTTGTTTTTATTATGAAAGAACAACTTAATCAACTATCAGCATATc > 1:4666419/2‑100 (MQ=255) ccgCGATATAATGAATATAAGTTTTTTGAAATTTCAGTTAATTATAAGGAGGTTGTTTTTATTATGAAAGAACAACTTAATCAACTATCAGCATATCAGc > 1:1327017/3‑100 (MQ=255) ataATGAATATAAGTTTTTTGAAATTTCAGTTAATTATAAGGAGGTTGTTTTTATTATGAAAGAACAACTTAATCAACTATCAGCATATCAGCCTGGttt > 1:2139662/1‑100 (MQ=255) aaTGAATATAAGTTTTTTGAAATTTCAGTTAATTATAAGGAGGTTGTTTTTATTATGAAAGAACAACTTAATCAACTATCAGCATGTCAGCCTGGTTTAt > 1:4870728/1‑100 (MQ=255) aaTGAATATAAGTTTTTTGAAATTTCAGGTAATTATAAGGAGGTTGTTTTTATTATGAAAGAACAACTTAATCAACTATCAGCATATCAGCCTGGTTTAt > 1:5435374/1‑100 (MQ=255) aaGTTTTTTGAAATTTCAGTTAATTATAAGGAGGTTGTTTTTATTATGAAAGAACAACTTAATCAACTATCAGCATATCAGCCTGGTTTATCTCCAAggg > 1:6006955/1‑100 (MQ=255) | AATGTAAGCTATTATGATGTGAAAATAGTAGCATTGCATTTTAGAAACATAGAGCGATATAATGAATATAAGTTTTTTGAAATTTCAGTTAATTCTAAGGAGGTTGTTTTTATTATGAAAGAACAACTTAATCAACTATCAGCATATCAGCCTGGTTTATCTCCAAGGG > NC_007793/785864‑786032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |