| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 769,854 | T→C | L56L (CTA→CTG) | SAUSA300_RS03725 ← | membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 769,854 | 0 | T | C | 100.0% | 43.3 / NA | 17 | L56L (CTA→CTG) | SAUSA300_RS03725 | membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (1/16); total (1/16) | |||||||||||
TAGCAATAAATTTTTGGTCTGTAATGTATACAGGTTTTAATTTTTTATCAATGTAAAACTGTAGTATCGTCCAAATGATAAACATCGTTATAGTACATAGAGTAATAAAGTTATATTTATCAATTATGAATGTATTTATAAAGGCGTTTATCGTAATAGATAACAACATTGCACTTAATGATAAATGTTGCA > NC_007793/769757‑769948 | tAGCAATAAATTTTTGGTCTGTAATGTATACAGGTTTTAATTTTTTATCAATGTAAAACTGTAGTATCGTCCAAATGATAAACATCGTTATAGTACACag < 1:5306317/100‑1 (MQ=255)caGCAATAAATTTTTGGTCTGTAATGTATACAGGTTTTAATTTTTTATCAATGTAAAACTGTAGTATCGTCCAAATGATAAACATCGTTATAGTACACag < 1:1996841/99‑1 (MQ=255) cAATAAATTTTTGGTCTGTAATGTATACAGGTTTTAATTTTTTATCAATGTAAAACTGTAGTATCGTCCAAATGATAAACATCGTTATAGTACACAGAGt < 1:1721439/100‑1 (MQ=255) aaTAAATTTTTGGTCTGTAATGTATACAGGTTTTAATTTTTTATCAATGTAAAACTGTAGTATCGTCCAAATGATAAACATCGTTATAGTACACAAAGta < 1:3602709/100‑1 (MQ=255) aaTTTTTGGTCTGTAATGTATACAGGTTTTAATTTTTTATCAATGTAAAACTGTAGTATCGTCCAAATGATAAACATCGTTATAGTACACAGAGtaatac < 1:3350171/100‑2 (MQ=255) aaTGTATACAGGTTTTAATTTTTTATCAATGTAAAACTGTAGTATCGTCCAAATGATAAACATCGTTATAGTACACAGAGTAATAAAGTTATATTTATCa < 1:2903909/100‑1 (MQ=255) tAATTTTTTATCAATGTAAATCTGTAGTATCGTCCAAATGATAAACATCGTTATAGTACACAGAGTAATAAAGTTATATTTATCAATTATGAATGTAttt < 1:5276442/100‑1 (MQ=255) tCAATGTAAAACTGTAGTATCGTCCAAATGATAAACATCGTTATAGTACACAGAGTAATAAAGTTATATTTATCAATTATGAATGTATTTATAAAGGCgg < 1:5933970/100‑2 (MQ=255) tCAATGTAAAACTGTAGTATCGTCCAAATGATAAACATCGTTATAGTACACAGAGTAATAAAGTTATATTTATCAATTATGAATGTATTTATAAAGGCgg < 1:2336605/100‑2 (MQ=255) ctcttccgatcTGTAGTATCGTCCAAATGATAAACATCGTTATAGTACACAGAGTAATAAAGTTATATTTATCAATTATGAATGTATTTATAAAGGCGtt < 1:1910709/90‑1 (MQ=255) cAATGTAAAACTGTAGTATCGTCCAAATGATAAACATCGTTATAGTACACAGAGTAATAAAGTTATATTTATCAATTATGAATGTATTTATAAAGGCGtt < 1:3638611/100‑1 (MQ=255) agaTGATAAACATCGTTATAGTACACAGAGTAATAAAGTTATATTTATCAATTATGAATGTATTTATAAAGGCGTTTATCGTAATAGATAACAACATTGc < 1:2790242/98‑1 (MQ=255) agaTGATAAACATCGTTATAGTACACAGAGTAATAAAGTTATAGTTATCAATTATGAATGTATTTATAAAGGCGTTTATCGTAATAGATAACAACATTGc < 1:4469982/98‑1 (MQ=255) aaTGATAAACATCGTTATAGTACACAGAGTAATAAAGTTATATTTATCAATTATGAATGTATTTATAAAGGCGTTTATCGTAATAGATAACAACATTGct < 1:3045446/100‑2 (MQ=255) aTGATAAACATCGTTATAGTACACAGAGTAATAAAGTTATATTTATCAATTATGAATGTATTTATAAAGGCGTTTATCGTAATAGATAACAACATTGCag < 1:6512220/100‑2 (MQ=255) gATAAACATCGTTATAGTACACAGAGTAATAAAGTTATATTTATCAATTATGAATGTATTTATAAAGGCGTTTATCGTAATAGATAACAACATTGCACtt < 1:2024978/100‑1 (MQ=255) gTACACAGAGTAATAAAGTTATATTTATCAATTATGAATGTATTTATAAAGGCGTTTATCGTAATAGATAACAACATTGCACTTAATGATAAATGTTGCa > 1:4689589/1‑100 (MQ=255) | TAGCAATAAATTTTTGGTCTGTAATGTATACAGGTTTTAATTTTTTATCAATGTAAAACTGTAGTATCGTCCAAATGATAAACATCGTTATAGTACATAGAGTAATAAAGTTATATTTATCAATTATGAATGTATTTATAAAGGCGTTTATCGTAATAGATAACAACATTGCACTTAATGATAAATGTTGCA > NC_007793/769757‑769948 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |