D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	639,348	A→G	intergenic (+15/‑118)	SAUSA300_RS03020 → / → SAUSA300_RS03025	hypothetical protein/membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	639,348	0	A	G	100.0%	706.4 / NA	247	intergenic (+15/‑118)	SAUSA300_RS03020/SAUSA300_RS03025	hypothetical protein/membrane protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (245/2); total (245/2)

Only 100 of 247 total aligned reads displayed.

CATATTCACAACCTTCAAACCAACAACAAAGATTAGCGACAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAACATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGAGTGTTCGGATTTAAACATTTATTAATACTGA  >  NC_007793/639251‑639444

      cacaACCTTCAAACCAACAACAAAGATTAGCGACAGTTGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTa                                                                                          >  1:6594803/1‑100 (MQ=255)

                 ccccAACAACAAAGATTAGCGACAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCtt                                                                               >  1:6377925/3‑100 (MQ=255)

                    tgacaacaaAGATTAGCGACAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGtt                                                                            >  1:408012/3‑100 (MQ=255)

                    gaacaacaaAGATTAGCGACAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGtt                                                                            >  1:2718475/2‑100 (MQ=255)

                     aacaacaaAGATTAGCGACAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTa                                                                           >  1:3222343/1‑100 (MQ=255)

                              ccttAGCGACAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAg                                                                  >  1:4719510/3‑100 (MQ=255)

                                 tAGCGACAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGtt                                                               >  1:3014432/1‑100 (MQ=255)

                                 tAGCGACAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGtt                                                               >  1:6411412/1‑100 (MQ=255)

                                 tAGCGACAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGtt                                                               >  1:3684259/1‑100 (MQ=255)

                                  aGCGACAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTta                                                              >  1:1598629/1‑100 (MQ=255)

                                  aGCGACAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTta                                                              <  1:4847573/100‑1 (MQ=255)

                                   gCGACAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTtaa                                                             >  1:5835144/1‑100 (MQ=255)

                                    tgACAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTtaat                                                            >  1:4363736/2‑100 (MQ=255)

                                    cGACAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTtaat                                                            >  1:536178/1‑100 (MQ=255)

                                     gACAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTtagat                                                           >  1:2600262/1‑97 (MQ=255)

                                      ggtgatgatGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTtaataa                                                          >  1:191875/4‑100 (MQ=255)

                                      gcAGATGATGACATTGGCAATGGCGAATCCATATTTGATTTTTAAAAAGCAACAATGCAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTtaataa                                                          >  1:3211095/2‑100 (MQ=255)

                                       cAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTaataat                                                         >  1:5324624/1‑100 (MQ=255)

                                        aGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATc                                                        >  1:806383/1‑100 (MQ=255)

                                        aGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATc                                                        >  1:4989475/1‑100 (MQ=255)

                                         gatgatGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCa                                                       >  1:5408765/1‑100 (MQ=255)

                                          gtgatgaCATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCaa                                                      >  1:5255250/2‑100 (MQ=255)

                                           ctctgaCATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAg                                                     >  1:3388016/4‑100 (MQ=255)

                                            gatgtCATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATTAAGCATAATTTCTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGa                                                    >  1:4407587/1‑100 (MQ=255)

                                            gatgaCATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGa                                                    >  1:4092419/1‑100 (MQ=255)

                                            gatgaCATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGa                                                    >  1:6056447/1‑100 (MQ=255)

                                            gatgaCATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGa                                                    >  1:2779232/1‑100 (MQ=255)

                                            gatgaCATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGa                                                    >  1:3941373/1‑100 (MQ=255)

                                            gatgaCATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGa                                                    >  1:2408403/1‑100 (MQ=255)

                                             atgaCATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGAc                                                   >  1:3439979/1‑100 (MQ=255)

                                             atgaCATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAATATGTAGGTTAATAATCAAGAc                                                   >  1:2026294/1‑100 (MQ=255)

                                              tgaCATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACg                                                  >  1:5364844/1‑100 (MQ=255)

                                              tgaCATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACg                                                  >  1:4524346/1‑100 (MQ=255)

                                               gaCATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCACCAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGc                                                 >  1:3308554/1‑100 (MQ=255)

                                               gaCATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGc                                                 >  1:3165945/1‑100 (MQ=255)

                                                aCATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCa                                                >  1:6190133/1‑100 (MQ=255)

                                                 cATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCat                                               >  1:5571888/1‑100 (MQ=255)

                                                 cATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCat                                               >  1:1371800/1‑100 (MQ=255)

                                                 cATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCat                                               >  1:2483603/1‑100 (MQ=255)

                                                 cATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCat                                               >  1:6316166/1‑100 (MQ=255)

                                                 cATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGATAATAATCAAGATGCat                                               >  1:5061161/1‑100 (MQ=255)

                                                 cATTGGCAATGGTGAATCCACATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCat                                               >  1:2360602/1‑100 (MQ=255)

                                                 agttGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCat                                               >  1:91169/3‑100 (MQ=255)

                                                 agttGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCat                                               >  1:4608951/3‑100 (MQ=255)

                                                 aaTTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCat                                               >  1:2861927/2‑100 (MQ=255)

                                                  tttGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGCAGGTTAATAATCAAGACGCata                                              >  1:6497717/2‑100 (MQ=255)

                                                  gttGGCAATGGTGAATCCATATTTGATTTTTAAAACGTAACTATGAAGCATAATTACTTAATAGCTTGTTAAGTGTGTAGGTTCATAATCAAGCCGCata                                              >  1:522325/2‑100 (MQ=255)

                                                  aTTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCata                                              >  1:5762658/1‑100 (MQ=255)

                                                  aTTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCata                                              >  1:1162353/1‑100 (MQ=255)

                                                   ttGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCatat                                             >  1:1154157/1‑100 (MQ=255)

                                                   ttGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCatat                                             >  1:1013184/1‑100 (MQ=255)

                                                   ttGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCatat                                             >  1:2252486/1‑100 (MQ=255)

                                                   ctGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCatat                                             >  1:5947770/2‑100 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAGTCAAGACGCAtata                                            >  1:4787565/1‑100 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGcgagat                                            >  1:209261/1‑95 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCAtata                                            >  1:96590/1‑100 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCAtata                                            >  1:4000733/1‑100 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCAtata                                            >  1:6194395/1‑100 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCAtata                                            >  1:1737552/1‑100 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCAtata                                            >  1:6120355/1‑100 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCAtata                                            >  1:183298/1‑100 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCAtata                                            >  1:6003683/1‑100 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCAtata                                            >  1:1894633/1‑100 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCAtata                                            >  1:2007080/1‑100 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCAtata                                            >  1:5115395/1‑100 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCAtata                                            >  1:2729895/1‑100 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCAtata                                            >  1:4125262/1‑100 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCAtata                                            >  1:4179415/1‑100 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCAtata                                            >  1:4208763/1‑100 (MQ=255)

                                                    tGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCAtata                                            >  1:3140219/1‑100 (MQ=255)

                                                    tGGCAATGGAGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCACGACGCAtata                                            >  1:1443737/1‑100 (MQ=255)

                                                     ggCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATAc                                           >  1:4191998/1‑100 (MQ=255)

                                                     ggCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATAc                                           >  1:2892864/1‑100 (MQ=255)

                                                      gCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACt                                          >  1:5543027/1‑100 (MQ=255)

                                                        agtGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACttt                                        >  1:3913249/3‑100 (MQ=255)

                                                         gtGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACtttt                                       >  1:4561786/2‑100 (MQ=255)

                                                         aTGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACtttt                                       >  1:5606216/1‑100 (MQ=255)

                                                          tGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTa                                      >  1:1252488/1‑100 (MQ=255)

                                                          aggTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGATAATAATCAAGACGCATATACTTTTa                                      >  1:5630892/2‑100 (MQ=255)

                                                           ggTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTAt                                     >  1:1505223/1‑100 (MQ=255)

                                                           ggTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTAt                                     >  1:3551992/1‑100 (MQ=255)

                                                             tGAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTc                                   >  1:2503559/1‑100 (MQ=255)

                                                              gAATCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCg                                  >  1:3087349/1‑100 (MQ=255)

                                                               ttagcATATCTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGa                                 >  1:5737316/5‑100 (MQ=255)

                                                               aaTCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGa                                 >  1:1500699/1‑100 (MQ=255)

                                                               aaTCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGa                                 >  1:1645827/1‑100 (MQ=255)

                                                               aaTCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGATAAGTATGAAGGCTAATAATCAAGACGCATATACTTTTATTCGa                                 >  1:5477800/1‑100 (MQ=255)

                                                                 tCCATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGAgt                               >  1:611016/1‑100 (MQ=255)

                                                                  ccATATTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGAgtg                              >  1:2137483/1‑100 (MQ=255)

                                                                    atatTTGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGAGTGtt                            >  1:4939284/1‑100 (MQ=255)

                                                                      ccctGATTTTTAAAAAGCAACAATGAAGCATAATTACTTAATAGCTTGTTCAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGAGTGTTCg                          >  1:2913193/4‑100 (MQ=255)

                                                                               cgagggaGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGAGTGTTCGGATTTAAAc                 >  1:1313275/7‑100 (MQ=255)

                                                                                    aaGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGAGTGTTCGGATTTAAACATtta            >  1:5177659/1‑100 (MQ=255)

                                                                                     agccgcaaTGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGAGTGTTCGGATTTAAACATttat           >  1:3794587/6‑100 (MQ=255)

                                                                                     aGCAACAATGAAGCATAATTACTTACTAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGAGTGTTCGGATTTAAACATttat           >  1:2562356/1‑100 (MQ=255)

                                                                                     aGCAACAATGAAGCATAATTACTTAATAGCTTGTTCAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGCGTGTTCGGATTTAAACATttat           >  1:5874020/1‑100 (MQ=255)

                                                                                     aGCAACAATGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGAGTGTTCGGATTTAAACATttat           >  1:5303313/1‑100 (MQ=255)

                                                                                       caacaaTGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGAGTGTTCGGATTTAAACATttatta         >  1:2816062/1‑100 (MQ=255)

                                                                                         acaaTGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGAGTGTTCGGATTTAAACATTTATTAAt       >  1:2310148/1‑100 (MQ=255)

                                                                                            aTGAAGCATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGAGTGTTCGGATTTAAACATTTATTAATACt    >  1:1964305/1‑100 (MQ=255)

CATATTCACAACCTTCAAACCAACAACAAAGATTAGCGACAGATGATGACATTGGCAATGGTGAATCCATATTTGATTTTTAAAAAGCAACAATGAAACATAATTACTTAATAGCTTGTTAAGTATGTAGGTTAATAATCAAGACGCATATACTTTTATTCGAGTGTTCGGATTTAAACATTTATTAATACTGA  >  NC_007793/639251‑639444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`