| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 621,836 | T→G | S981A (TCG→GCG) | SAUSA300_RS02925 → | MSCRAMM family adhesin SdrE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 621,836 | 0 | T | G | 92.3% | 473.8 / 94.2 | 714 | S981A (TCG→GCG) | SAUSA300_RS02925 | MSCRAMM family adhesin SdrE |
| Reads supporting (aligned to +/- strand): ref base T (53/2); new base G (650/8); total (704/10) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.51e-01 | |||||||||||
Only 100 of 716 total aligned reads displayed.
TCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGACAGTGATTCAGATTCAGACAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACA > NC_007793/621746‑621932 | gcagacagcgactcagacgcagatagcgattcagatgCGGACAGCGATTCAGACGCAGACAGCGATTCAGACGCAGATAGCGACTCCGATGCGGACcgcg > 1:1958130/2‑100 (MQ=11) ttatcccagcgattcagacgcagatagCGATTCTGATGCGCACAGCGATTCAGACGCAGATAGCGATTCAGATGCGGACAGCGATTCAGACGCAGATAGc > 1:1004773/7‑100 (MQ=2) ctcagacagcgactcagacgcagatagCGATTCAGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGAAGCAGATAGc > 1:6634854/1‑100 (MQ=2) atagcgactcagacgcagatcgCGACTCTGATGCGGACAGCGACTCAGACGCAGATCGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATtc > 1:5824753/3‑100 (MQ=2) cgcgactcagacgcagatagCGATTCAGATGCGGACAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATtcag > 1:3809096/2‑100 (MQ=11) tgtggcagacgcagatagCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATtctgat > 1:3644317/6‑100 (MQ=2) tgactcagacgcagatagCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATtctgat > 1:1993531/2‑100 (MQ=2) cagatgcggacagcgattcagacgcagacagcgattcagacgcaGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGACtcagattcaga > 1:3098806/9‑100 (MQ=2) cagacgcagatagCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATtctgatgcaga > 1:2595148/1‑100 (MQ=2) cagacgcagatagCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATtctgatgcaga > 1:2079915/1‑100 (MQ=2) agacgcagatagCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATtctgatgcagac > 1:4291587/1‑99 (MQ=2) gacgcagatagCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATGCGGACAGCGATTCAGACGCAGATAGCGATtctgatgcggaca > 1:4040136/1‑93 (MQ=0) gacgcagatagCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATtctgatgcagaca > 1:6537472/1‑98 (MQ=2) tagcgattcagatgcgGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGACtca > 1:5074594/5‑100 (MQ=1) aagcgactcagattcagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGGTTCAGATAGCGATtct > 1:5554264/8‑99 (MQ=1) agcgattcagatgcgGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATtctg > 1:3839523/4‑98 (MQ=1) agcgattcagatgcgGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATtctg > 1:6412924/4‑98 (MQ=1) cagattcagatgcaGACAGCGACTCAGACGCAGATAGCGATTCAGATGCGGACAGCGATTCAGACGCAGACAGCGATTCAGACGCAGATAGCGATtctga > 1:2298134/3‑100 (MQ=11) tattcagattcagACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGCTAGCGATtctgatg > 1:4858439/2‑98 (MQ=11) gattcagatgcgGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATtctgatg > 1:6236350/1‑98 (MQ=11) ctcagattcagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATtctgatgcg > 1:5176113/2‑96 (MQ=11) ccagattcagaCAGCGACTCAGACGCAGATAGCGATTCAGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATtcagacgcag > 1:896986/2‑100 (MQ=11) ctgatgcggaCAGCGATTCAGACGCGGATAGCGATTCAGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATtcagacgcaga > 1:1772038/9‑100 (MQ=2) ctgatgcggaCAGCGACTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCAGACAGCGACtcagacgcaga > 1:2250189/9‑100 (MQ=2) ctgatgcggaCAGCGACTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCAGACAGCGACtcagacgcaga > 1:246719/9‑100 (MQ=2) cagattcagtCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATACAGACGCAGATAGCGATTCCGATTCAGATAGCGATtctgttgcgga > 1:3522333/1‑91 (MQ=2) cagattcagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATtctgatgcgga > 1:1174340/1‑94 (MQ=11) cagattcagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATtctgatgcgga > 1:2684762/1‑94 (MQ=11) cagattcagaCAGCGACTCAGACGCAGATAGCGATTCAGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATtcagacgcaga > 1:3398899/1‑100 (MQ=11) cagacgcagaTAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATtcagacgcaga > 1:5960208/7‑100 (MQ=0) cagacgcagaTAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATtcagacgcaga > 1:822816/7‑100 (MQ=0) cagacgcagaTAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATtcagacgcaga > 1:4341591/7‑100 (MQ=0) agattcagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATtctgatgcggac > 1:733087/1‑93 (MQ=11) agacgcagaTAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGTGATTCTGATGCGGACAGCGATtcagacgcagat > 1:930333/6‑99 (MQ=0) agacgcagaTAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATtcagacgcagat > 1:3371473/6‑99 (MQ=0) agacgcagaTAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATtcagacgcagat > 1:3454406/6‑99 (MQ=0) gattcagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATtctgatgcggaca > 1:5884139/1‑92 (MQ=11) gatgcggaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATGCGGACAGCGATtcagacgcagata > 1:294536/7‑98 (MQ=2) gatgcggaCAGCGATTCAGACGCAGATAGCGATTCAGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATtcagacgcagata > 1:5143488/7‑98 (MQ=2) cacgcagaTAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGACtcagacgcagatc > 1:6135782/5‑98 (MQ=1) cggcggaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAg > 1:1416421/6‑100 (MQ=2) tgcggaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGc > 1:3573460/5‑100 (MQ=2) tcagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCg > 1:1533908/1‑100 (MQ=11) tcagaCAGCGATTCAGACACAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCg > 1:1899575/1‑100 (MQ=11) gcggaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCCGATAGCGATTCTGATGCGGACAGCg > 1:3794447/4‑100 (MQ=2) gcggaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCg > 1:1270589/4‑100 (MQ=2) cagaCAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGCTAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGa > 1:3972225/1‑100 (MQ=2) cagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCCGATAGCGATTCAGATTCAGCTAGCGATTCTGATGCGGACAGCGa > 1:1704504/1‑100 (MQ=2) cagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAgatc > 1:2027906/1‑97 (MQ=2) cagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCgt > 1:6301957/1‑99 (MQ=11) cagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGa > 1:3273676/1‑100 (MQ=11) cagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGa > 1:4903580/1‑100 (MQ=11) cagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGa > 1:4808293/1‑100 (MQ=11) cagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGa > 1:4966323/1‑100 (MQ=11) cagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGa > 1:27948/1‑100 (MQ=11) cagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGa > 1:546093/1‑100 (MQ=11) cagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGa > 1:2430916/1‑100 (MQ=11) cagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGa > 1:5639408/1‑100 (MQ=11) cagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGa > 1:6027450/1‑100 (MQ=11) cagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGa > 1:6072099/1‑100 (MQ=11) cagaCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGa > 1:1379063/1‑100 (MQ=11) cagaCAGCGACTCAGACGCAGATAGCGATTCAGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCAGACAGCGATTCAGACGCAGATAGCGa > 1:3066348/1‑100 (MQ=11) atgcAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGat > 1:1250653/4‑99 (MQ=2) agaTAGCGATTCAGATTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGATTCAGATTCTGATAACGACTCTGATGCGGACAGCGAc > 1:5031291/1‑100 (MQ=2) tgcAGCGATTCAGACGCAGATAGCGATTCAGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGTCAGCGatt > 1:2876723/3‑98 (MQ=2) caCAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGatt > 1:5376805/2‑98 (MQ=2) ccAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGAAtc > 1:5514970/2‑100 (MQ=2) ccAGCGACTCAGACGCAGATAGCGATTCAGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATtcagacgcagatgtcgattc > 1:2760218/2‑91 (MQ=2) ataGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGGGATtc < 1:3143623/98‑1 (MQ=2) cAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTTAGATAGCGATTCTGATGCGGACAGCGATtca > 1:4530179/1‑100 (MQ=2) aGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGCTtcag > 1:4462548/1‑100 (MQ=2) cgctggcagatAGCGACTCTGATGCGGACAGCGCCTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACtcagattcaga > 1:3729352/7‑100 (MQ=2) cagacgcagatAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATCCAGATTCAGATAGCGATTATGATGCGGACAGCGATtcagacgcaga > 1:568846/7‑100 (MQ=2) gaccccagatAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATtcagacgcagat > 1:121921/6‑100 (MQ=0) cgacgcagatAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCCGATTCAGATAGCGATTCTGATGCGGGCAGCGATtcagacgcagat > 1:6922/6‑100 (MQ=2) agattcagatAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACtcagatgcagac < 1:4223672/100‑2 (MQ=11) cgcagatAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGc > 1:6194397/3‑100 (MQ=2) tgtgatAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCg > 1:4662597/4‑100 (MQ=2) tcagatAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCg > 1:1120930/1‑100 (MQ=11) cagatAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGa > 1:301003/1‑100 (MQ=11) ccatAGCGATTCTGATGCGGACAGCGATTCAGACGCAGGTAGCGATTCAGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGAt > 1:5214882/3‑100 (MQ=2) agatAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGACTCAGACGCAGATAGCGAt > 1:4385546/1‑100 (MQ=11) agatAGCGATTCAGATGCGGACAGCGATTCAGACGCAGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAt > 1:574837/1‑100 (MQ=2) aGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTctg > 1:5421324/1‑98 (MQ=2) aGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTcag < 1:4182668/100‑3 (MQ=11) gatctgATGCGGACAGCGACTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGGCAGCGATTCGGAcgc < 1:5301699/95‑3 (MQ=0) catgggATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGACTCAGACAGCGATTCTGatgc > 1:2529571/6‑97 (MQ=2) tCAGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCAGACAGCGAGTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGatgcgg > 1:2152904/1‑95 (MQ=2) cctgATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGatgcgg > 1:181684/4‑95 (MQ=2) ctgATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGatgcgga > 1:6480265/3‑94 (MQ=2) cAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCGGACGCAGa > 1:318936/1‑100 (MQ=11) cAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGa > 1:1467790/1‑100 (MQ=11) cAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGa > 1:3881615/1‑100 (MQ=11) cAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGa > 1:1087507/1‑100 (MQ=11) tgATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGatgcggac > 1:4700714/2‑93 (MQ=2) gATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGata > 1:4098062/1‑98 (MQ=11) gATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGatgcggaca > 1:6382565/1‑92 (MQ=0) gATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGatgcggaca > 1:1628174/1‑92 (MQ=2) gATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGatgcggaca > 1:1327125/1‑92 (MQ=2) gATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGatgcggaca > 1:4129588/1‑92 (MQ=2) | TCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGACAGTGATTCAGATTCAGACAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGACAGCGACTCAGATTCAGATAGCGATTCGGACTCAGACA > NC_007793/621746‑621932 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |