| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 618,062 | T→G | S1236A (TCA→GCA) | SAUSA300_RS02920 → | serine‑aspartate repeat‑containing protein D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 618,062 | 0 | T | G | 88.8% | 79.8 / 20.9 | 116 | S1236A (TCA→GCA) | SAUSA300_RS02920 | serine‑aspartate repeat‑containing protein D |
| Reads supporting (aligned to +/- strand): ref base T (12/1); new base G (98/5); total (110/6) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.99e-03 | |||||||||||
Only 100 of 134 total aligned reads displayed.
AGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGA‑TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCA > NC_007793/617968‑618148 | aGATGCGGACAGCGACTCAGATTCAGACAGCGACTCAGACGCAGATAGCGACTCAGA‑CGCAGATAGCGACTCTGATGCGGACAGCGATTCAGACGCAGAt > 1:2059761/1‑100 (MQ=11) gatgcggacagcgactcagacgcagacagcgactcagacgcaGATAGCGACTCTGA‑TGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATa > 1:745440/7‑100 (MQ=11) tcggacagcgactcagattcagacagcgactcagacgcaGATAGCGACTCAGA‑TGCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCg > 1:3829705/4‑100 (MQ=11) tcagacagcgactcagactcagacagcgactcagacTCAGATAGTGACTCAGA‑TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCg > 1:401408/1‑100 (MQ=255) gactcagacgcagatagcgactcagacgcagatagcGACTCTGA‑TGCGGACAGCGACTCAGATTCCGACAGCGATTCAGACGCAGATAGCGACtctgatt > 1:6015302/1‑100 (MQ=14) gactcagacgcagatagcgactcagacgcagatagcGACTCTGA‑TGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGGTAGCGATtcagatt > 1:4913576/1‑100 (MQ=11) ctcagattcagacagcgactcagacgcagaTAGCGACTCAGA‑CGCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGATtctgatgcg > 1:3731227/1‑97 (MQ=11) cctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGattcagattcag > 1:124014/10‑100 (MQ=11) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:4408402/9‑100 (MQ=2) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:4664836/9‑100 (MQ=2) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:5304036/9‑100 (MQ=2) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:4451901/9‑100 (MQ=2) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:3848184/9‑100 (MQ=2) cctgggcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:382393/9‑100 (MQ=2) cagactcagacagcgactcagactcagaTAGTGACTCAGA‑TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACtcagattcaga > 1:2792668/1‑100 (MQ=255) agcttgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATtctgattcgga > 1:3149353/9‑100 (MQ=2) acgaagcagatagcgactctgatgcggaCAGTGACTCAGA‑CGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAAtctgaagcaga > 1:6652682/7‑100 (MQ=2) tgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagac > 1:4122623/8‑99 (MQ=11) tgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATtccgattcagac > 1:5102163/8‑99 (MQ=11) agatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACagcgactcagacgcagatagcgactcagacgcagat > 1:3520794/8‑100 (MQ=11) gattcagacagcgactcagacgcagaTAGCGACTCAGA‑CGCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGATtctgatgcggaca < 1:2223079/97‑8 (MQ=0) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATGGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:6224015/7‑98 (MQ=2) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGCttcagattcagaca > 1:4853405/7‑98 (MQ=2) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGCttcagattcagaca > 1:4885022/7‑98 (MQ=2) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:3683718/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:1176726/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:5030851/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:6466110/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:6339632/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:2368281/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:1884029/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:2207760/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:2175714/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGACtcagattcagaca > 1:510762/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATa > 1:5948036/7‑100 (MQ=11) gatgcagacagcgactcagacgcagaTAGCGATTCAGA‑TGCGGACAGCGATTCTGATGCGGACAGCGATTCAGACGCAGAAAGCGATtctgatgcagaca > 1:3086470/5‑98 (MQ=2) gtgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGcgactcagacgcagatagcgactcagacgcagatag > 1:1795222/6‑100 (MQ=11) ctgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGcgactcagacgcagatagcgactcagacgcagatag > 1:4910679/6‑100 (MQ=11) ctgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGcgactcagacgcagatagcgactcagacgcagatag > 1:2142470/6‑100 (MQ=11) atgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAg > 1:506086/6‑100 (MQ=11) atgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGcgactcagacgcagatagcgactcagacgcagatag > 1:3028127/6‑100 (MQ=11) tgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGc > 1:4969799/5‑100 (MQ=11) tgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACTCAGACGCAGCTAGc > 1:6286481/5‑100 (MQ=11) cgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCGGATAGCGATTCAGATTCAGACAGc > 1:4183365/5‑100 (MQ=11) cacggatagcgactctgatgcggaCAGCGACTCAGA‑CGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCAGACAGc > 1:336843/8‑100 (MQ=2) gcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCg > 1:5619826/4‑100 (MQ=11) gcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGACTCAGATTCAGACAGCg > 1:6234034/4‑100 (MQ=11) gcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCAATTCAGACGCAGATAGCGATTCAGATTCAGACAGCg > 1:4113938/4‑100 (MQ=11) acggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGactcagacgcagatagcgactcagacgcagatagcg > 1:4243821/4‑100 (MQ=11) gggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGAGGACAGCGATTCAGACGAAGATAGCGATTCAGATTCAGACAGCGa > 1:5580588/3‑100 (MQ=2) cggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGa > 1:904622/3‑100 (MQ=11) cggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGActcagacgcagatagcgactcagacgcagatagcga > 1:3716803/3‑100 (MQ=11) cggacagcgattcagacgcagaTAGCGATTCAGA‑TGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCgt < 1:6381064/98‑2 (MQ=11) cagatagcgactcagattcagaTAGTGATTCAGACTTCAGATAGCGACTCAGATTCGGACAGCGATTCAGGCTCAGATAGTGACTCAGATTCAGATAGCg > 1:3159701/1‑100 (MQ=11) cagacagcgactcagactcagaTAGTGACTCCGA‑TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGTTAGCAACTCAGATTCAGATACCGa > 1:3274129/1‑100 (MQ=17) cagacagcgactcagactcagaTAGTGACTCAGA‑TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGa > 1:174704/1‑100 (MQ=255) ggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGac > 1:632321/2‑99 (MQ=11) ggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGac > 1:178558/2‑99 (MQ=11) ggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGac > 1:6036896/2‑99 (MQ=11) ggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGac > 1:562518/2‑99 (MQ=11) ccacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCCGACAGCGATTCAGACGCAGATAGCGATTCCGATTCGGTTAACGac > 1:4060829/3‑99 (MQ=2) agatagcgactcagacgcagaTAGCGACTCTGA‑TGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGAt > 1:3313709/1‑100 (MQ=11) agacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGAt > 1:4109666/1‑100 (MQ=2) agacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACTCAGACGCCGATAGCgcc > 1:5823165/1‑98 (MQ=11) agacagcgactcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGActcagacgcagatagcgactcagacgcagatagcgac > 1:4481661/1‑99 (MQ=11) gccagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGActcagacgcagatagcgactcagacgcagatagcgact > 1:2443794/3‑98 (MQ=11) gacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATacagacagatcgg > 1:2665582/1‑95 (MQ=2) gacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGact > 1:5041515/1‑98 (MQ=11) gacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGacc < 1:4769031/100‑3 (MQ=11) gacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGActcagacgcagatagcgactcagacgcagatagcgact > 1:3628143/1‑98 (MQ=11) cccagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGAtt > 1:4364540/3‑100 (MQ=11) aacggcgactcagacgcagaTAGCGACTCTGA‑TGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGAtt > 1:2301942/5‑100 (MQ=11) ctagcgactctgatgcggaCAGCGACTCAGA‑CGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCAGACAGCGACTc > 1:2219100/3‑100 (MQ=2) atagcgactctgatgcggaCAGCGACTCAGA‑CGCAGATAGCGATTCTGATGCGGACAGCGATTCAGGCGCAGATAGCGATTCTGATGCAGACAGCGACTc > 1:6499145/3‑100 (MQ=2) acagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATacagacagatcgga > 1:75982/1‑94 (MQ=2) ggcgactcagacgcagaTAGCGACTCTGA‑TGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTcag > 1:3507318/2‑98 (MQ=11) agcgactcagacgcagaTAGCGACTCTGA‑TGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGGTAGCGATTcag > 1:5854696/1‑98 (MQ=11) agcgactcagacgcagaTAGCGACTCTGA‑TGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTcag > 1:1395631/1‑98 (MQ=11) ccccagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTcatacgc > 1:1283802/4‑94 (MQ=2) ggcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGACTCGGAcaca > 1:3761248/3‑100 (MQ=11) tcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTcaggcgcag > 1:2569269/1‑92 (MQ=2) cagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTATGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTcacgcagatc > 1:3086367/1‑91 (MQ=2) tgacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCGGACGCAGAt > 1:71438/2‑100 (MQ=2) agacgcagaTAGCGATTTAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACTCAGATGCAGATAGCGACTCCGatgcggac > 1:6206581/1‑93 (MQ=2) ccagaCAGCGATTCAGA‑CGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTTAGCTTCAGATAGCGATTCTGATGCGGATAGCg > 1:2944327/2‑100 (MQ=2) cagaTAGTGACTCAGA‑TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGa > 1:3742993/1‑100 (MQ=255) cagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCTGACGCAGATAGCGa > 1:1108026/1‑100 (MQ=2) cagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATGCGGACAGCGATTCGGACGCAGAtcggaa > 1:4824215/1‑95 (MQ=2) cagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGATTCGAACGCAGAtcggaa > 1:3747470/1‑95 (MQ=2) ctaTAGCGATTCAGA‑CGCAGATAGCGATTCAGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCGGACACAGAtcggaag > 1:2746081/3‑94 (MQ=2) ctAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGCTTCAGACAGCGACTCGGACGCAGATAGCGATtc > 1:1923951/2‑100 (MQ=11) tGACTCAGA‑CGCAGATAGCGATTCAGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATtcagat > 1:4609483/1‑100 (MQ=2) aCTCAGA‑TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtcagattc < 1:3144197/100‑1 (MQ=35) agacgcagatAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGAGAGCGATTCTGATGCAGATAGCGATtcagacgcagat > 1:6468681/6‑100 (MQ=2) acccagatAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGACTCCGACGCAGATAGCGTTTCAGACGCAGATAg > 1:2027464/4‑100 (MQ=2) cAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGa > 1:2263148/1‑100 (MQ=255) tgcGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCTGATACGGATAGc > 1:4317927/3‑100 (MQ=2) cGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGa > 1:1335400/1‑100 (MQ=255) cAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCGGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCa > 1:4687981/1‑100 (MQ=255) cAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGTGACTCa > 1:4418869/1‑100 (MQ=255) | AGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGA‑TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCA > NC_007793/617968‑618148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |