| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 618,016 | T→C | S1220S (AGT→AGC) | SAUSA300_RS02920 → | serine‑aspartate repeat‑containing protein D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 618,016 | 0 | T | C | 93.7% | 203.1 / 7.0 | 175 | S1220S (AGT→AGC) | SAUSA300_RS02920 | serine‑aspartate repeat‑containing protein D |
| Reads supporting (aligned to +/- strand): ref base T (11/0); new base C (159/5); total (170/5) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 178 total aligned reads displayed.
CAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGA‑TTCAGATAGCGACT‑CAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGAT > NC_007793/617919‑618115 | cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATCGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:6013095/1‑100 (MQ=11)cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGGCAGCGATTCAGACGCAGATAGCGa > 1:3243580/1‑100 (MQ=11)cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCGGACGCAGATAGCGa > 1:4924463/1‑100 (MQ=11)cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:2109332/1‑100 (MQ=11)cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:3766845/1‑100 (MQ=11)cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:2449689/1‑100 (MQ=11)cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:4004200/1‑100 (MQ=11)cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:6201262/1‑100 (MQ=11)cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:5019882/1‑100 (MQ=11)cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:5702202/1‑100 (MQ=11)cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:1001205/1‑100 (MQ=11)cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:3560387/1‑100 (MQ=11)cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:4234703/1‑100 (MQ=11)cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:3477838/1‑100 (MQ=11)cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:4356750/1‑100 (MQ=11)cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGAAGATAGCGa > 1:6145504/1‑100 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGTTGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:4292999/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:4199004/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:3853641/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:1386390/1‑99 (MQ=11) gacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGCCGCAGATAGCGatt > 1:4994238/1‑98 (MQ=11) tcagaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGA‑TTCAGATAGcc > 1:1911337/1‑99 (MQ=40) cAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGA‑TTCAGATAGCGACTGCAGAtcggaagagca > 1:1542661/1‑90 (MQ=14) gatgcggacagcgactcagacgcagacagcgactcagacgcaGATAGCGACTCTGA‑TGCGGACAGCGACT‑CAGATTCAGACAGCGATTCAGACGCAGATa > 1:745440/7‑100 (MQ=11) tcggacagcgactcagattcagacagcgactcagacgcaGATAGCGACTCAGA‑TGCAGATAGCGACT‑CTGATGCGGACAGCGACTCAGACGCAGATAGCg > 1:3829705/4‑100 (MQ=11) ctctagcgactctgatgcggacagcgactcagacgcagaTAGCGACTCAGA‑CGCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGat > 1:5097565/5‑99 (MQ=2) gactcagacgcagatagcgactcagacgcagatagcGACTCTGA‑TGCGGACAGCGACT‑CAGATTCCGACAGCGATTCAGACGCAGATAGCGACtctgatt > 1:6015302/1‑100 (MQ=14) cctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGattcagattcag > 1:124014/10‑100 (MQ=11) ttgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcaga > 1:6222744/9‑100 (MQ=11) gcgaggcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcaga > 1:3230065/9‑100 (MQ=11) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:367286/9‑100 (MQ=2) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:3143221/9‑100 (MQ=2) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:4451901/9‑100 (MQ=2) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:4408402/9‑100 (MQ=2) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:5304036/9‑100 (MQ=2) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:4664836/9‑100 (MQ=2) cctgggcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:382393/9‑100 (MQ=2) cagactcagacagcgactcagactcagaTAGTGACTCAGA‑TTCAGATAGCGACT‑CAGATTCGGACAGCGATTCAGACTCAGATAGCGACtcagattcaga > 1:2792668/1‑100 (MQ=255) acgaagcagatagcgactctgatgcggaCAGTGACTCAGA‑CGCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGAAtctgaagcaga > 1:6652682/7‑100 (MQ=2) tgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATtccgattcagac > 1:5102163/8‑99 (MQ=11) ccctgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACagcgactcagacgcagatagcgactcagacgcagat > 1:5421114/8‑100 (MQ=11) agatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACagcgactcagacgcagatagcgactcagacgcagat > 1:3520794/8‑100 (MQ=11) gctgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:414679/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCCGATAGCGAttcagattcagaca > 1:2239772/7‑98 (MQ=2) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGCttcagattcagaca > 1:4885022/7‑98 (MQ=2) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:6339632/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:1176726/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:2368281/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:3683718/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAACGACTCAGACGCAGATAGCGACTCAGACGCAGATa > 1:3738819/7‑100 (MQ=2) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TGCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATa > 1:5948036/7‑100 (MQ=11) gatgcagacagcgactcagacgcagaTAGCGATTCAGA‑TGCGGACAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGAAAGCGATtctgatgcagaca > 1:3086470/5‑98 (MQ=2) gtgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGcgactcagacgcagatagcgactcagacgcagatag > 1:1795222/6‑100 (MQ=11) ctgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGcgactcagacgcagatagcgactcagacgcagatag > 1:2142470/6‑100 (MQ=11) ctgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGcgactcagacgcagatagcgactcagacgcagatag > 1:4910679/6‑100 (MQ=11) atgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAg > 1:2369391/6‑100 (MQ=11) tgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGc > 1:4969799/5‑100 (MQ=11) tgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGc > 1:985409/5‑100 (MQ=11) tgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCgactcagacgcagatagcgactcagacgcagatagc > 1:2980657/5‑100 (MQ=11) tgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCgactcagacgcagatagcgactcagacgcagatagc > 1:2185964/5‑100 (MQ=11) tgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCGACTCAGACGCAGATAGCGACTCAGACGCAGCTAGc > 1:6286481/5‑100 (MQ=11) gcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCg > 1:6530453/4‑100 (MQ=11) gcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGACTCAGATTCAGACAGCg > 1:6234034/4‑100 (MQ=11) gcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCAATTCAGACGCAGATAGCGATTCAGATTCAGACAGCg > 1:4113938/4‑100 (MQ=11) acggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCGactcagacgcagatagcgactcagacgcagatagcg > 1:4243821/4‑100 (MQ=11) gggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGAGGACAGCGATTCAGACGAAGATAGCGATTCAGATTCAGACAGCGa > 1:5580588/3‑100 (MQ=2) cggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGa > 1:904622/3‑100 (MQ=11) cggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCGActcagacgcagatagcgactcagacgcagatagcga > 1:3716803/3‑100 (MQ=11) cggacagcgattcagacgcagaTAGCGATTCAGA‑TGCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCgt < 1:6381064/98‑2 (MQ=11) cagatagcgactcagattcagaTAGTGATTCAGACTTCAGATAGCGACT‑CAGATTCGGACAGCGATTCAGGCTCAGATAGTGACTCAGATTCAGATAGCg > 1:3159701/1‑100 (MQ=11) cagacagcgactcagactcagaTAGTGACTCAGA‑TTCAGATAGCGACT‑CAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGa > 1:174704/1‑100 (MQ=255) aggccagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCGActcagacgcagatagcgactcagacgcagatagcga > 1:1814697/5‑100 (MQ=11) taacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCGACTCAGACGCAGATAGCGACTCAAACGCAGATAGCGac > 1:4817571/3‑99 (MQ=11) ggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGac > 1:562518/2‑99 (MQ=11) ggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGac > 1:632321/2‑99 (MQ=11) ccacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCCGACAGCGATTCAGACGCAGATAGCGATTCCGATTCGGTTAACGac > 1:4060829/3‑99 (MQ=2) agatagcgactcagacgcagaTAGCGACTCTGA‑TGCGGACAGCGACT‑CAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGAt > 1:3313709/1‑100 (MQ=11) agacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGAt > 1:4109666/1‑100 (MQ=2) agacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGac > 1:2039525/1‑99 (MQ=11) agacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCGACTCAGACGCAGATAGCGACTCAGACGCCGATAGCgcc > 1:5823165/1‑98 (MQ=11) agacagcgactcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCGActcagacgcagatagcgactcagacgcagatagcgac > 1:4481661/1‑99 (MQ=11) gacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATacagacagatcgg > 1:2665582/1‑95 (MQ=2) gacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGact > 1:5041515/1‑98 (MQ=11) gacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCGActcagacgcagatagcgactcagacgcagatagcgact > 1:3628143/1‑98 (MQ=11) cacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACT‑CTGATGCGGACAGCGActcagacgcagatagcgactcagacgcagatagcgacg > 1:6453800/2‑98 (MQ=11) ctagcgactctgatgcggaCAGCGACTCAGA‑CGCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCAGACAGCGACTc > 1:2219100/3‑100 (MQ=2) ccagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATGCGGACAGCGATTc > 1:1402954/2‑100 (MQ=11) atagcgactctgatgcggaCAGCGACTCAGA‑CGCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGGCGCAGATAGCGATTCTGATGCAGACAGCGACTc > 1:6499145/3‑100 (MQ=2) acagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATacagacagatcgga > 1:75982/1‑94 (MQ=2) cagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAACGACT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGAATca > 1:3452218/1‑99 (MQ=2) ccccagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTcatacgc > 1:1283802/4‑94 (MQ=2) attcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCGGAcgc < 1:2704333/98‑3 (MQ=2) tcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTcaggcgcag > 1:2569269/1‑92 (MQ=2) cagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑ATGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTcacgcagatc > 1:3086367/1‑91 (MQ=2) tgacgcagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCGGACGCAGAt > 1:71438/2‑100 (MQ=2) cagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCTGACGCAGATAGCGa > 1:1108026/1‑100 (MQ=2) cagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATGCGGACAGCGATTCGGACGCAGAtcggaa > 1:4824215/1‑95 (MQ=2) cagaTAGCGATTCAGA‑TTCAGATAGCGATT‑CTGATGCGGACAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGATTCGAACGCAGAtcggaa > 1:3747470/1‑95 (MQ=2) ctaTAGCGATTCAGA‑CGCAGATAGCGATT‑CAGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCGGACACAGAtcggaag > 1:2746081/3‑94 (MQ=2) tGACTCAGA‑CGCAGATAGCGATT‑CAGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATtcagat > 1:4609483/1‑100 (MQ=2) | CAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGA‑TTCAGATAGCGACT‑CAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGAT > NC_007793/617919‑618115 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |