| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 618,008 | T→G | S1218A (TCA→GCA) | SAUSA300_RS02920 → | serine‑aspartate repeat‑containing protein D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 618,008 | 0 | T | G | 94.3% | 89.8 / ‑0.2 | 72 | S1218A (TCA→GCA) | SAUSA300_RS02920 | serine‑aspartate repeat‑containing protein D |
| Reads supporting (aligned to +/- strand): ref base T (4/0); new base G (66/0); total (72/0) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.52e-01 | |||||||||||
Only 100 of 193 total aligned reads displayed.
TCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGA‑TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGAT > NC_007793/617912‑618103 | tcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGacagcgactcagatgcagacagcgattcagacgcag > 1:3887829/1‑100 (MQ=11) cagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGACTCTGATGCGGAcagcgactcagattcagaccgcgattcacacacaga > 1:2129936/1‑100 (MQ=11) ctctgcggacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCAGATGCGGACAGCGACTCTGATTCAGACAGCGATTCAGACGCAGAt > 1:185537/8‑100 (MQ=11) gattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGGTTCAGACGCAGATa > 1:4919627/1‑100 (MQ=11) attcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAg > 1:4411475/1‑100 (MQ=11) cttagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAgc > 1:2829628/4‑99 (MQ=11) tcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCCGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGCTAgcg > 1:4050584/1‑98 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATCGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:6013095/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtcggaa > 1:2324268/1‑95 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtcggaa > 1:4654024/1‑95 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:364770/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:2749259/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:3675258/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:3477838/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:5019882/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:5504543/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:4528105/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:5702202/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:6201262/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:4356750/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:3766845/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:4004200/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:6617147/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:681901/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:1001205/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:775348/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:4214952/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:1215674/1‑100 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGTTGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:4292999/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGTCAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:6502618/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:1164912/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:4199004/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:1525843/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:1698085/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:6165106/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:5387824/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGAc > 1:2460327/1‑100 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAAACGCAGATAGCGat > 1:4943445/1‑99 (MQ=11) gacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGCCGCAGATAGCGatt > 1:4994238/1‑98 (MQ=11) tcagaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGA‑TTCAGATAGcc > 1:1911337/1‑99 (MQ=40) ccAGATAGCGATTCAGATTCAGACAGCGCCTCAGACGCAGATAGCGATTCAGGTGCGGACAGCGATTCAGA‑CGCAGATAGCGATTCTGATGTGGACAgat > 1:3579915/2‑98 (MQ=0) aGATGCGGACAGCGACTCAGATTCAGACAGCGACTCAGACGCAGATAGCGACTCAGA‑CGCAGATAGCGACTCTGATGCGGACAGCGATTCAGACGCAGAt > 1:2059761/1‑100 (MQ=11) gatgcggacagcgactcagacgcagacagcgactcagacgcaGATAGCGACTCTGA‑TGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATa > 1:745440/7‑100 (MQ=11) ctcagattcagacagcgactcagacgcagaTAGCGACTCAGA‑CGCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGATtctgatgcg > 1:3731227/1‑97 (MQ=11) cctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGattcagattcag > 1:124014/10‑100 (MQ=11) ttgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcaga > 1:6222744/9‑100 (MQ=11) gcgaggcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcaga > 1:3230065/9‑100 (MQ=11) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:5304036/9‑100 (MQ=2) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:4451901/9‑100 (MQ=2) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:3848184/9‑100 (MQ=2) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:3143221/9‑100 (MQ=2) cctgggcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:382393/9‑100 (MQ=2) tgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATtccgattcagac > 1:5102163/8‑99 (MQ=11) ctgtgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACACCGATTCAGACGCAGATAGCGATtcagattcagat > 1:410638/8‑100 (MQ=11) agatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACagcgactcagacgcagatagcgactcagacgcagat > 1:3520794/8‑100 (MQ=11) gctgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:414679/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATGGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:6224015/7‑98 (MQ=2) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCCGATAGCGAttcagattcagaca > 1:2239772/7‑98 (MQ=2) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGCttcagattcagaca > 1:4885022/7‑98 (MQ=2) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:2175714/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:6466110/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:6339632/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:2368281/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAACGACTCAGACGCAGATAGCGACTCAGACGCAGATa > 1:3738819/7‑100 (MQ=2) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATa > 1:5948036/7‑100 (MQ=11) gatgcagacagcgactcagacgcagaTAGCGATTCAGA‑TGCGGACAGCGATTCTGATGCGGACAGCGATTCAGACGCAGAAAGCGATtctgatgcagaca > 1:3086470/5‑98 (MQ=2) gtgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGcgactcagacgcagatagcgactcagacgcagatag > 1:1795222/6‑100 (MQ=11) ctgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGcgactcagacgcagatagcgactcagacgcagatag > 1:4910679/6‑100 (MQ=11) atgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAg > 1:506086/6‑100 (MQ=11) tgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGc > 1:985409/5‑100 (MQ=11) tgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCgactcagacgcagatagcgactcagacgcagatagc > 1:2185964/5‑100 (MQ=11) tgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCgactcagacgcagatagcgactcagacgcagatagc > 1:2980657/5‑100 (MQ=11) tgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACTCAGACGCAGCTAGc > 1:6286481/5‑100 (MQ=11) cacggatagcgactctgatgcggaCAGCGACTCAGA‑CGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCAGACAGc > 1:336843/8‑100 (MQ=2) gcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCg > 1:5619826/4‑100 (MQ=11) gcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCAATTCAGACGCAGATAGCGATTCAGATTCAGACAGCg > 1:4113938/4‑100 (MQ=11) acggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGactcagacgcagatagcgactcagacgcagatagcg > 1:4243821/4‑100 (MQ=11) cggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGa > 1:904622/3‑100 (MQ=11) cggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGActcagacgcagatagcgactcagacgcagatagcga > 1:3716803/3‑100 (MQ=11) cggacagcgattcagacgcagaTAGCGATTCAGA‑TGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCgt < 1:6381064/98‑2 (MQ=11) cagatagcgactcagattcagaTAGTGATTCAGACTTCAGATAGCGACTCAGATTCGGACAGCGATTCAGGCTCAGATAGTGACTCAGATTCAGATAGCg > 1:3159701/1‑100 (MQ=11) cagacagcgactcagactcagaTAGTGACTCCGA‑TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGTTAGCAACTCAGATTCAGATACCGa > 1:3274129/1‑100 (MQ=17) taacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACTCAAACGCAGATAGCGac > 1:4817571/3‑99 (MQ=11) ggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGac > 1:178558/2‑99 (MQ=11) ggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGac > 1:6036896/2‑99 (MQ=11) ggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGac > 1:632321/2‑99 (MQ=11) agacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACTCAGACGCCGATAGCgcc > 1:5823165/1‑98 (MQ=11) gccagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGActcagacgcagatagcgactcagacgcagatagcgact > 1:2443794/3‑98 (MQ=11) gacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATacagacagatcgg > 1:2665582/1‑95 (MQ=2) gacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGact > 1:5041515/1‑98 (MQ=11) gacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGacc < 1:4769031/100‑3 (MQ=11) cccagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGAtt > 1:4364540/3‑100 (MQ=11) ctagcgactctgatgcggaCAGCGACTCAGA‑CGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCAGACAGCGACTc > 1:2219100/3‑100 (MQ=2) acagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATacagacagatcgga > 1:75982/1‑94 (MQ=2) cagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAACGACTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGAATca > 1:3452218/1‑99 (MQ=2) agcgactcagacgcagaTAGCGACTCTGA‑TGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTcag > 1:1395631/1‑98 (MQ=11) ccccagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTcatacgc > 1:1283802/4‑94 (MQ=2) attcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTCGGAcgc < 1:2704333/98‑3 (MQ=2) tcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTcaggcgcag > 1:2569269/1‑92 (MQ=2) cagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTATGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGATTcacgcagatc > 1:3086367/1‑91 (MQ=2) | TCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGA‑TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGAT > NC_007793/617912‑618103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |