| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 618,001 | C→T | D1215D (GAC→GAT) | SAUSA300_RS02920 → | serine‑aspartate repeat‑containing protein D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 618,001 | 0 | C | T | 91.9% | 98.0 / 0.6 | 74 | D1215D (GAC→GAT) | SAUSA300_RS02920 | serine‑aspartate repeat‑containing protein D |
| Reads supporting (aligned to +/- strand): ref base C (6/0); new base T (68/0); total (74/0) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.88e-01 | |||||||||||
Only 100 of 197 total aligned reads displayed.
CAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGA‑TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGG > NC_007793/617905‑618095 | tagcgattcagattcagacagcgactcaggCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagacagcgattca > 1:5532150/2‑100 (MQ=11) agcgattcagattcagacagcgactcggaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgcctcagattctgacagcgattcag > 1:1700526/1‑100 (MQ=11) cagattcagatgcggacagcgactcagaCGCAGATAGCGATTCAGATGCGGACAGCGACTCAGATtcagacagcgactcagacgcagacagcgactcaga > 1:2547556/6‑100 (MQ=1) gattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcgggcagcgactcagattcagacagcgattcagacg > 1:5806828/4‑99 (MQ=11) tcagatgcggacagcgactcagaCGCAGATAGCGATTCAGATGCGGATAGCGACTCTGATgcggacagcgaatcagacgcagatagcgattctgatgcgg > 1:845366/1‑95 (MQ=2) ctgatgcggacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATGCGGAcagcgactcagattcagacagcgactcagacgcaga > 1:6197889/9‑100 (MQ=11) ctctgcggacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCAGATGCGGACAGCGACTCTGATTCAGACAGCGATTCAGACGCAGAt > 1:185537/8‑100 (MQ=11) gattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGGTTCAGACGCAGATa > 1:4919627/1‑100 (MQ=11) attcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAg > 1:267822/1‑100 (MQ=11) attcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAg > 1:4411475/1‑100 (MQ=11) ttcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGACGCGGACAGCGACTCAGACTCAGACAGCGATTCAGACGCAGATAgc > 1:419951/1‑99 (MQ=11) ttcagacagcgactcagaCGCAGATAGCGAATCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtcgg > 1:3401476/1‑97 (MQ=11) cttagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAgc > 1:2829628/4‑99 (MQ=11) ctcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAgc > 1:2360375/2‑99 (MQ=11) cccagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAgc > 1:3723962/3‑99 (MQ=11) tcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGACTCTGATgcggacagcgactcagacgcagacagcgactcaaacggatatagcg > 1:1687927/1‑90 (MQ=1) tcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAgcg > 1:5371349/1‑98 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCGGACGCAGATAGCGa > 1:4924463/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGTAGATAGCGa > 1:2584932/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtcggaa > 1:4654024/1‑95 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:775348/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:3560387/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:1215674/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:3926393/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:2749259/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:1001205/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:2449689/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:5702202/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:6356067/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:4528105/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:4234703/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:4282678/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:2109332/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGAAGATAGCGa > 1:6145504/1‑100 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:3853641/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:1164912/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:1525843/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:1386390/1‑99 (MQ=11) gacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGACTCAGACAGCGATTCAGACGCAGATAGCGatt > 1:6335794/1‑98 (MQ=11) ggcctcagaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACACAGATAGTGACtccga‑atcagat > 1:3475074/4‑100 (MQ=11) tcagaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGA‑TTCAGATAGcc > 1:1911337/1‑99 (MQ=40) gatgcggacagcgactcagacgcagacagcgactcagacgcaGATAGCGACTCTGA‑TGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATa > 1:745440/7‑100 (MQ=11) tcggacagcgactcagattcagacagcgactcagacgcaGATAGCGACTCAGA‑TGCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCg > 1:3829705/4‑100 (MQ=11) tcagacagcgactcagactcagacagcgactcagacTCAGATAGTGACTCAGA‑TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCg > 1:401408/1‑100 (MQ=255) gcggacagcgactcagacgcagatagcgactcagacgcaGATAGCGACTCTGA‑TGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCg > 1:5955169/4‑100 (MQ=11) ctctagcgactctgatgcggacagcgactcagacgcagaTAGCGACTCAGA‑CGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGat > 1:5097565/5‑99 (MQ=2) gactcagacgcagatagcgactcagacgcagatagcGACTCTGA‑TGCGGACAGCGACTCAGATTCCGACAGCGATTCAGACGCAGATAGCGACtctgatt > 1:6015302/1‑100 (MQ=14) cctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGattcagattcag > 1:124014/10‑100 (MQ=11) ttgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcaga > 1:6222744/9‑100 (MQ=11) gcgaggcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcaga > 1:3230065/9‑100 (MQ=11) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:3143221/9‑100 (MQ=2) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:367286/9‑100 (MQ=2) ctgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACtcagacgcaga > 1:4451901/9‑100 (MQ=2) acgaagcagatagcgactctgatgcggaCAGTGACTCAGA‑CGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAAtctgaagcaga > 1:6652682/7‑100 (MQ=2) tgatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagac > 1:4122623/8‑99 (MQ=11) ccctgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACagcgactcagacgcagatagcgactcagacgcagat > 1:5421114/8‑100 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCCGATAGCGAttcagattcagaca > 1:2239772/7‑98 (MQ=2) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGCttcagattcagaca > 1:4885022/7‑98 (MQ=2) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:3683718/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:5030851/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGACtcagattcagaca > 1:510762/7‑98 (MQ=11) gatgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAACGACTCAGACGCAGATAGCGACTCAGACGCAGATa > 1:3738819/7‑100 (MQ=2) gatgcggacagcgaatcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGAttcagattcagaca > 1:4339702/7‑98 (MQ=11) gatgcagacagcgactcagacgcagaTAGCGATTCAGA‑TGCGGACAGCGATTCTGATGCGGACAGCGATTCAGACGCAGAAAGCGATtctgatgcagaca > 1:3086470/5‑98 (MQ=2) gtgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGcgactcagacgcagatagcgactcagacgcagatag > 1:1795222/6‑100 (MQ=11) ctgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGcgactcagacgcagatagcgactcagacgcagatag > 1:2142470/6‑100 (MQ=11) ctgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGcgactcagacgcagatagcgactcagacgcagatag > 1:4910679/6‑100 (MQ=11) atgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAg > 1:2369391/6‑100 (MQ=11) atgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAg > 1:506086/6‑100 (MQ=11) tgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGc > 1:985409/5‑100 (MQ=11) tgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGc > 1:4969799/5‑100 (MQ=11) tgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCgactcagacgcagatagcgactcagacgcagatagc > 1:2185964/5‑100 (MQ=11) tgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCgactcagacgcagatagcgactcagacgcagatagc > 1:2980657/5‑100 (MQ=11) tgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACCCTGATGCGGACAGCgactcagacgcagatagcgactcagacgcagatagc > 1:3784894/5‑100 (MQ=11) cgcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCGGATAGCGATTCAGATTCAGACAGc > 1:4183365/5‑100 (MQ=11) gcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCg > 1:6530453/4‑100 (MQ=11) gcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCg > 1:5619826/4‑100 (MQ=11) gcggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGACTCAGATTCAGACAGCg > 1:6234034/4‑100 (MQ=11) cggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGa > 1:904622/3‑100 (MQ=11) cagatagcgactcagattcagaTAGTGATTCAGACTTCAGATAGCGACTCAGATTCGGACAGCGATTCAGGCTCAGATAGTGACTCAGATTCAGATAGCg > 1:3159701/1‑100 (MQ=11) cagacagcgactcagactcagaTAGTGACTCCGA‑TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGTTAGCAACTCAGATTCAGATACCGa > 1:3274129/1‑100 (MQ=17) taacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACTCAAACGCAGATAGCGac > 1:4817571/3‑99 (MQ=11) ggacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGac > 1:178558/2‑99 (MQ=11) ccacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCCGACAGCGATTCAGACGCAGATAGCGATTCCGATTCGGTTAACGac > 1:4060829/3‑99 (MQ=2) agatagcgactcagacgcagaTAGCGACTCTGA‑TGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGAt > 1:3313709/1‑100 (MQ=11) agacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCGGACAGCGAt > 1:4109666/1‑100 (MQ=2) agacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGac > 1:2039525/1‑99 (MQ=11) gacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGcactc < 1:6291527/100‑5 (MQ=11) gacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGact > 1:5017869/1‑98 (MQ=11) gacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGacc < 1:4769031/100‑3 (MQ=11) gacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGActcagacgcagatagcgactcagacgcagatagcgact > 1:3628143/1‑98 (MQ=11) cccagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGAtt > 1:4364540/3‑100 (MQ=11) cacagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGACTCTGATGCGGACAGCGActcagacgcagatagcgactcagacgcagatagcgacg > 1:6453800/2‑98 (MQ=11) aacggcgactcagacgcagaTAGCGACTCTGA‑TGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGAtt > 1:2301942/5‑100 (MQ=11) ctagcgactctgatgcggaCAGCGACTCAGA‑CGCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGCAGACAGCGACTc > 1:2219100/3‑100 (MQ=2) ccagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATGCGGACAGCGATTc > 1:1402954/2‑100 (MQ=11) atagcgactctgatgcggaCAGCGACTCAGA‑CGCAGATAGCGATTCTGATGCGGACAGCGATTCAGGCGCAGATAGCGATTCTGATGCAGACAGCGACTc > 1:6499145/3‑100 (MQ=2) acagcgattcagacgcagaTAGCGATTCAGA‑TTCAGATAGCGATTCTGATGCGGACAGCGATTCAGACGCAGATAGCGATTCAGATacagacagatcgga > 1:75982/1‑94 (MQ=2) ggcgactcagacgcagaTAGCGACTCTGA‑TGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTcag > 1:3507318/2‑98 (MQ=11) agcgactcagacgcagaTAGCGACTCTGA‑TGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGGTAGCGATTcag > 1:5854696/1‑98 (MQ=11) | CAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGA‑TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGG > NC_007793/617905‑618095 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |