Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 617,989 C→T D1211D (GAC→GAT)  SAUSA300_RS02920 → serine‑aspartate repeat‑containing protein D

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_007793617,9890CT90.5% 97.5 / 2.5 74D1211D (GAC→GAT) SAUSA300_RS02920serine‑aspartate repeat‑containing protein D
Reads supporting (aligned to +/- strand):  ref base C (7/0);  new base T (67/0);  total (74/0)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.03e-01

Only 100 of 259 total aligned reads displayed.

GACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACT‑CAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGA  >  NC_007793/617891‑618084
                                                                                                  |                                                                                                
gattcagatgcggaccgcgactcagattcagacagcgacTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacg                                                                                                 >  1:3296446/4‑99 (MQ=1)
  ttcagatgcggacagcgactcagattcagacagcgacTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgca                                                                                               >  1:3691225/2‑100 (MQ=11)
  gacagattcagatagcgattcagattcagacagcgactCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcggacgca                                                                                               >  1:4440565/3‑100 (MQ=11)
  ctcagatgcggccagcgactcagattcagacagcgaCTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcgtactgcgactcagacgca                                                                                               >  1:6460968/1‑100 (MQ=2)
  agcagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgca                                                                                               >  1:5447609/3‑100 (MQ=11)
   tcagatgcggacagcgactcagattcagacagcgacTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcag                                                                                              >  1:2121998/1‑100 (MQ=11)
   tcagatgcggacagcgactcagattcagacagcgacTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcag                                                                                              >  1:2095352/1‑100 (MQ=11)
   ctagatgcggacagcgactcagattcagacagcgactcAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcag                                                                                              >  1:454410/3‑100 (MQ=11)
   ccagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcag                                                                                              >  1:530748/2‑100 (MQ=11)
   ccagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcac                                                                                              >  1:5587461/2‑99 (MQ=11)
    ttgatgcggacagcgactcagattcagacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga                                                                                             >  1:2030282/9‑100 (MQ=11)
    gtccctcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcaga                                                                                             >  1:4995412/9‑100 (MQ=1)
    ctgatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcaga                                                                                             >  1:4803347/9‑100 (MQ=1)
    ctgatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcaga                                                                                             >  1:1558912/9‑100 (MQ=1)
    ccgacgcagatagcgactctgatgcggacagcgactcagaCGCAGATAGCGATTCAGATGCGGACAGCGACTCAGATtcagacagcgactcagacgcaga                                                                                             >  1:4098390/7‑100 (MQ=2)
    cagattcagatagcgattcagattcagacagcgactCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcggctcagacgcaga                                                                                             >  1:13794/1‑100 (MQ=11)
    cagattcagatagcgattcagattcagacagcgactCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga                                                                                             >  1:2463819/1‑100 (MQ=11)
    cagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga                                                                                             >  1:6218569/1‑100 (MQ=11)
    cagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga                                                                                             >  1:6334954/1‑100 (MQ=11)
    cagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga                                                                                             >  1:4818315/1‑100 (MQ=11)
    cagacgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcaga                                                                                             >  1:4593572/7‑100 (MQ=1)
     tgatgcggacagcgactcagattcagacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagat                                                                                            >  1:2284320/8‑99 (MQ=11)
     tgatgcggacagcgactcagattcagacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagat                                                                                            >  1:727185/8‑99 (MQ=11)
     agattcagatagcgattcagattcagacagcgactcAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcggacgcagat                                                                                            >  1:6238006/1‑99 (MQ=11)
     agatgcggacagcgactcagattcagacagcgactcAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcacacgcagat                                                                                            >  1:6409065/1‑99 (MQ=11)
     agacgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagac                                                                                            >  1:785697/6‑100 (MQ=11)
     agacgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagac                                                                                            >  1:4158116/6‑100 (MQ=11)
      gatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcatacagcgactcagacgcagatc                                                                                           >  1:4664792/7‑98 (MQ=1)
      gatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcagata                                                                                           >  1:6070656/7‑98 (MQ=1)
      gatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcagata                                                                                           >  1:1203336/7‑98 (MQ=1)
      gatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcagata                                                                                           >  1:1466657/7‑98 (MQ=1)
      gatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcagata                                                                                           >  1:236397/7‑98 (MQ=1)
      gatgcggacagcgactcagattcagacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagaca                                                                                           >  1:3524336/7‑100 (MQ=11)
       ttgcggacagcgactcagattcagacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgccgacagcgactcagacgcagatag                                                                                          >  1:253744/6‑100 (MQ=11)
       ccgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagacag                                                                                          >  1:5972726/4‑100 (MQ=11)
       atgcagatagcgattcagatgcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagataa                                                                                          <  1:1755614/97‑4 (MQ=11)
       acgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagacag                                                                                          >  1:2962282/4‑100 (MQ=11)
        cgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagacagc                                                                                         >  1:519222/3‑100 (MQ=11)
        agcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagacagc                                                                                         >  1:224088/3‑100 (MQ=11)
         tcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagag                                                                                        >  1:2173889/1‑98 (MQ=11)
         tcagatagcgattcagattcagacagcgactcagaCGAAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagag                                                                                        >  1:3382895/1‑98 (MQ=11)
         gcagatagcggttcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagacagcg                                                                                        >  1:1406670/2‑100 (MQ=11)
         gcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGTCGCAGATAGCGACTCTGATgcggacagcgactcagattcagacagca                                                                                        <  1:6093572/99‑2 (MQ=11)
         ccagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagacagcg                                                                                        >  1:3795030/2‑100 (MQ=11)
          cggacagcgactcagatgcagacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgctgacagcgactcagacgcagttagcga                                                                                       >  1:8565/3‑100 (MQ=11)
          cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagacagcga                                                                                       >  1:6003270/1‑100 (MQ=11)
          cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaggagatcg                                                                                       >  1:3942137/1‑93 (MQ=11)
          cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagaga                                                                                       >  1:3733211/1‑100 (MQ=11)
          cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagaga                                                                                       >  1:5945955/1‑100 (MQ=11)
          cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgccgacagcgactcagattcagacagcga                                                                                       >  1:3760086/1‑100 (MQ=11)
           tgatagcgattcagattcagacagcgactcggaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagat                                                                                      >  1:4755002/5‑99 (MQ=2)
           cagtagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagat                                                                                      >  1:6564087/5‑99 (MQ=11)
           agatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagat                                                                                      >  1:5645426/1‑99 (MQ=11)
             ctagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagatca                                                                                    >  1:1831047/3‑97 (MQ=11)
             atagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCCACTCTGATgcggacagcgactcggattcagacagcgattc                                                                                    >  1:802404/3‑100 (MQ=11)
              tagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagacagcgattca                                                                                   >  1:5094320/2‑100 (MQ=11)
              cagcgactcagattcagacagcggctcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagcgattct                                                                                   >  1:1927634/1‑99 (MQ=11)
                  gattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcgggcagcgactcagattcagacagcgattcagacg                                                                               >  1:5806828/4‑99 (MQ=11)
                  ccctcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagatcataatg                                                                               >  1:1003710/3‑92 (MQ=11)
                     tcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGacagcgactcagatgcagacagcgattcagacgcag                                                                            >  1:3887829/1‑100 (MQ=11)
                       ctctgcggacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCAGATGCGGACAGCGACTCTGATTCAGACAGCGATTCAGACGCAGAt                                                                          >  1:185537/8‑100 (MQ=11)
                       agattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGCTGCGGACAGCGACTCAGATTCTGACAGCGCTTCAGACGCAGAt                                                                          >  1:1220750/1‑100 (MQ=11)
                        gattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGGTTCAGACGCAGATa                                                                         >  1:4919627/1‑100 (MQ=11)
                         attcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAg                                                                        >  1:4411475/1‑100 (MQ=11)
                         attcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAg                                                                        >  1:267822/1‑100 (MQ=11)
                          ttcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGACGCGGACAGCGACTCAGACTCAGACAGCGATTCAGACGCAGATAgc                                                                       >  1:419951/1‑99 (MQ=11)
                          cttagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAgc                                                                       >  1:2829628/4‑99 (MQ=11)
                          cccagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAgc                                                                       >  1:3723962/3‑99 (MQ=11)
                           tcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCCGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGCTAgcg                                                                      >  1:4050584/1‑98 (MQ=11)
                           ccagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACTCAGATaccg                                                                      >  1:1786268/2‑97 (MQ=11)
                            cagatagcgattcagactcagatagcgattcagactCAGACAGCGATTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGAC‑CAGAtcggaag                                                                    >  1:764268/1‑94 (MQ=14)
                            cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGTAGATAGCGa                                                                     >  1:2584932/1‑100 (MQ=11)
                            cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtcggaa                                                                     >  1:2324268/1‑95 (MQ=11)
                            cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtcggaa                                                                     >  1:4654024/1‑95 (MQ=11)
                            cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                                     >  1:1001205/1‑100 (MQ=11)
                            cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                                     >  1:321491/1‑100 (MQ=11)
                            cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                                     >  1:2733664/1‑100 (MQ=11)
                            cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                                     >  1:6201262/1‑100 (MQ=11)
                            cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                                     >  1:6356067/1‑100 (MQ=11)
                            cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                                     >  1:5702202/1‑100 (MQ=11)
                            cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                                     >  1:4214952/1‑100 (MQ=11)
                            cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                                     >  1:4004200/1‑100 (MQ=11)
                            cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                                     >  1:364770/1‑100 (MQ=11)
                            cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                                     >  1:5019882/1‑100 (MQ=11)
                             agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGTTGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat                                                                    >  1:4292999/1‑99 (MQ=11)
                             agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGTCAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat                                                                    >  1:6502618/1‑99 (MQ=11)
                             agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat                                                                    >  1:3853641/1‑99 (MQ=11)
                             agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat                                                                    >  1:1698085/1‑99 (MQ=11)
                             agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat                                                                    >  1:5387824/1‑99 (MQ=11)
                             agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat                                                                    >  1:6165106/1‑99 (MQ=11)
                             agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAAACGCAGATAGCGat                                                                    >  1:4943445/1‑99 (MQ=11)
                                         ggcctcagaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACACAGATAGTGACtccgaatcagat                                                        >  1:3475074/4‑100 (MQ=11)
                                             tcagaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGcc                                                    >  1:1911337/1‑99 (MQ=40)
                                                               ccAGATAGCGATTCAGATTCAGACAGCGCCTCAGACGCAGATAGCGATTCAGGTGCGGACAGCGATTCAGACGCAGATAGCGATT‑CTGATGTGGACAgat                                 >  1:3579915/2‑98 (MQ=0)
                                                                cAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTGCAGAtcggaagagca                                 >  1:1542661/1‑90 (MQ=14)
                                                                     aGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACTCAAACGCCGATAGCGACTCTGCTGCGGATAACGACT‑CAGATGCAGACAGCGAttacg                           >  1:3130173/1‑97 (MQ=2)
                                                                                 tcggacagcgactcagattcagacagcgactcagacgcaGATAGCGACTCAGATGCAGATAGCGACT‑CTGATGCGGACAGCGACTCAGACGCAGATAGCg               >  1:3829705/4‑100 (MQ=11)
                                                                                          gactcagacgcagatagcgactcagacgcagatagcGACTCTGATGCGGACAGCGACT‑CAGATTCCGACAGCGATTCAGACGCAGATAGCGACtctgatt      >  1:6015302/1‑100 (MQ=14)
                                                                                          gactcagacgcagatagcgactcagacgcagatagcGACTCTGATGCGGACAGCGACT‑CAGATTCAGACAGCGATTCAGACGCAGGTAGCGATtcagatt      >  1:4913576/1‑100 (MQ=11)
                                                                                              cagactcagacagcgactcagactcagaTAGTGACTCAGATTCAGATAGCGACT‑CAGATTCGGACAGCGATTCAGACTCAGATAGCGACtcagattcaga  >  1:2792668/1‑100 (MQ=255)
                                                                                                  |                                                                                                
GACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACT‑CAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGA  >  NC_007793/617891‑618084

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑