| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 617,974 | A→G | S1206A (TCA→GCG) | SAUSA300_RS02920 → | serine‑aspartate repeat‑containing protein D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 617,974 | 0 | A | G | 93.4% | 102.6 / 2.1 | 77 | S1206S (TCA→TCG) | SAUSA300_RS02920 | serine‑aspartate repeat‑containing protein D |
| Reads supporting (aligned to +/- strand): ref base A (5/0); new base G (71/0); total (77/0) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.75e-01 | |||||||||||
Only 100 of 313 total aligned reads displayed.
TCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCG > NC_007793/617876‑618071 | ccAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGatagcgattcagattcagatagcgattcagattcag > 1:4727539/2‑100 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:1032054/1‑100 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:954901/1‑100 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:790622/1‑100 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:5373475/1‑100 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:5214893/1‑100 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:5085113/1‑100 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:5058777/1‑100 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:4246522/1‑100 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:3365762/1‑100 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:2539620/1‑100 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:1067156/1‑100 (MQ=11) ggACGCAGATAGCGATTCAGATTCAGATAACGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggac > 1:1505552/2‑100 (MQ=11) cgACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggac > 1:6110771/2‑100 (MQ=11) aGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggac > 1:2055858/1‑100 (MQ=11) acgcagatagcgattcagattcagatagcgattcagattCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacag > 1:70895/4‑100 (MQ=11) cggacagcgattcagacgcagatagcgattcagattcagacAGCGAATCAGACGCAGATCGCGATTCAGACGCAGATAGCGACTCTGATgcggccagcga > 1:5836269/6‑100 (MQ=2) agatagcgattcagattcagatagcgattcagattcAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgac > 1:136103/1‑100 (MQ=11) gatagcgattcagattcagatagcgattcagattcaGACAGCGAATCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgact > 1:6202102/1‑100 (MQ=11) aTAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagggaccc < 1:2400555/100‑3 (MQ=11) tagcgattcagattcagatagcgattcagattcagaCAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactca > 1:2815143/1‑100 (MQ=11) tAGCGATTCAGATGCGGACAGCGACTCAGATTCAGACAGCGACTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactca > 1:75864/1‑100 (MQ=11) cagcgattcagattcagatagcgattcagattcagacAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactca > 1:6029599/2‑100 (MQ=11) agcgattcagattcagatagcgattcagattcagacAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcag > 1:5607126/1‑100 (MQ=11) agcgattcagattcagatagcgattcagattcagacAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcag > 1:2561995/1‑100 (MQ=11) gcgattcagattcagatagcgattcagattcagacaGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcaga > 1:5567027/1‑100 (MQ=11) caggcagattcagatagcgattcagattcagacagcgactCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacg > 1:4203095/5‑99 (MQ=11) attcagatgcggacagcgactcagattcagacagcgacTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgc < 1:2352132/98‑3 (MQ=11) gacagattcagatagcgattcagattcagacagcgactCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcggacgca > 1:4440565/3‑100 (MQ=11) ctcagatgcggccagcgactcagattcagacagcgaCTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcgtactgcgactcagacgca > 1:6460968/1‑100 (MQ=2) agcagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgca > 1:5447609/3‑100 (MQ=11) tcagatgcggacagcgactcagattcagacagcgacTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcag > 1:2095352/1‑100 (MQ=11) tcagatgcggacaacgactcagattcagacagcgacTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagactcag > 1:1998711/1‑100 (MQ=11) ctagatgcggacagcgactcagattcagacagcgactcAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcag > 1:454410/3‑100 (MQ=11) ccagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcag > 1:530748/2‑100 (MQ=11) ttgatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcaga > 1:6351246/9‑100 (MQ=1) ctgatgcggacagcgactcagattcagacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga > 1:4652579/9‑100 (MQ=11) ccgacgcagatagcgactctgatgcggacagcgactcagaCGCAGATAGCGATTCAGATGCGGACAGCGACTCAGATtcagacagcgactcagacgcaga > 1:4098390/7‑100 (MQ=2) cagattcagatagcgattcagattcagacagcgactCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcggacgcaga > 1:3886762/1‑100 (MQ=11) cagattcagatagcgattcagattcagacagcgactCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagatcggaa > 1:2660674/1‑94 (MQ=11) cagattcagatagcgattcagattcagacagcgactCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga > 1:2463819/1‑100 (MQ=11) cagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga > 1:4173186/1‑100 (MQ=11) cagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga > 1:4913622/1‑100 (MQ=11) cagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga > 1:4818315/1‑100 (MQ=11) cagacgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcaga > 1:4593572/7‑100 (MQ=1) cagacgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcaga > 1:4797037/7‑100 (MQ=1) tgatgcggacagcgactcagattcagacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagat > 1:2284320/8‑99 (MQ=11) agattcagatggcgattcagattcagacagcgactcAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagat < 1:2738203/100‑2 (MQ=11) agatgcggacagcgactcagattcagacagcgactcAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactccgacgcagat > 1:6073531/1‑99 (MQ=11) agatgcggacagcgactcagattcagacagcgactcAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcacacgcagat > 1:6409065/1‑99 (MQ=11) agacgcagatagcgattcagattcagacagcgacttagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagac > 1:6326369/6‑100 (MQ=11) agacgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagat > 1:3244296/6‑99 (MQ=1) agacgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagac > 1:5734331/6‑100 (MQ=11) agacgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagactcagac > 1:1857939/6‑100 (MQ=11) gatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcatacagcgactcagacgcagatc > 1:4664792/7‑98 (MQ=1) gatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcagata > 1:1203336/7‑98 (MQ=1) gatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcagata > 1:3540667/7‑98 (MQ=1) ccgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagacag > 1:5972726/4‑100 (MQ=11) attcagatagcgattcagattcagacagcgactccgACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatag > 1:1546070/1‑100 (MQ=11) atgcagatagcgattcagatgcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagataa < 1:1755614/97‑4 (MQ=11) ctcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagctaga > 1:3852161/2‑95 (MQ=11) cgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGGCGCAGATAGCGACTCTGATgcggacagcgactcagattcagacagc > 1:1925911/3‑100 (MQ=11) agcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagacagc > 1:224088/3‑100 (MQ=11) tcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagag > 1:2173889/1‑98 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGCCTCTGATgcggacagcgactcagacacagatcggaa > 1:2701448/1‑94 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcatacgcagatcggaa > 1:3201536/1‑94 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaggagatcg > 1:3942137/1‑93 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagaga > 1:3822015/1‑100 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagaga > 1:3733211/1‑100 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagaga > 1:5945955/1‑100 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagaga > 1:3716697/1‑100 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagaga > 1:2124949/1‑100 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgccgacagcgactcagattcagacagcga > 1:3760086/1‑100 (MQ=11) cagtagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagat > 1:6564087/5‑99 (MQ=11) cagtagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagat > 1:1459826/5‑99 (MQ=11) agatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagat > 1:5645426/1‑99 (MQ=11) agatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagaaagagat > 1:6225673/1‑99 (MQ=11) ctagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagatca > 1:1831047/3‑97 (MQ=11) tagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagatcat < 1:3615339/99‑5 (MQ=11) ctgatgcggacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATGCGGAcagcgactcagattcagacagcgactcagacgcaga > 1:6197889/9‑100 (MQ=11) attcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAg > 1:4411475/1‑100 (MQ=11) ttcagacagcgactcagaCGCAGATAGCGAATCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtcgg > 1:3401476/1‑97 (MQ=11) tcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGACTCTGATgcggacagcgactcagacgcagacagcgactcaaacggatatagcg > 1:1687927/1‑90 (MQ=1) tcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCCGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGCTAgcg > 1:4050584/1‑98 (MQ=11) ccagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACTCAGATaccg > 1:1786268/2‑97 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATCGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:6013095/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGCCTCAGATTCAGACAGCGATTCAGACGCAGATAgcgg > 1:856205/1‑97 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCGGACGCAGATAGCGa > 1:4924463/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtcggaa > 1:2912493/1‑95 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:3675258/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:1001205/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:775348/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:3477838/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:4004200/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:4356750/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:5019882/1‑100 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGTCAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:6502618/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:1386390/1‑99 (MQ=11) gacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGCCGCAGATAGCGatt > 1:4994238/1‑98 (MQ=11) aGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACTCAAACGCCGATAGCGACTCTGCTGCGGATAACGACTCAGATGCAGACAGCGAttacg > 1:3130173/1‑97 (MQ=2) | TCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCG > NC_007793/617876‑618071 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |