Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 617,972 T→G S1206A (TCA→GCG)  SAUSA300_RS02920 → serine‑aspartate repeat‑containing protein D

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_007793617,9720TG93.5% 107.9 / 3.5 77S1206A (TCA→GCA) SAUSA300_RS02920serine‑aspartate repeat‑containing protein D
Reads supporting (aligned to +/- strand):  ref base T (5/0);  new base G (72/0);  total (77/0)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.84e-01

Only 100 of 318 total aligned reads displayed.

ATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCG  >  NC_007793/617874‑618071
                                                                                                  |                                                                                                   
actCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCagatagcgattcagattcagatagcgattcagattc                                                                                                    <  1:6198703/98‑1 (MQ=11)
actCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCagatagcgattcagattcagatagcgattcagattc                                                                                                    >  1:266368/3‑100 (MQ=11)
acccAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCagatagcgattcagattcagatagcgattcagattc                                                                                                    >  1:5743415/4‑100 (MQ=11)
   cAGACGCAGATAGCGACTCTGATGTGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga                                                                                                 >  1:5847305/1‑100 (MQ=11)
   cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga                                                                                                 >  1:1032054/1‑100 (MQ=11)
   cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga                                                                                                 >  1:954901/1‑100 (MQ=11)
   cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga                                                                                                 >  1:790622/1‑100 (MQ=11)
   cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga                                                                                                 >  1:5039958/1‑100 (MQ=11)
   cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga                                                                                                 >  1:394926/1‑100 (MQ=11)
   cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga                                                                                                 >  1:1067156/1‑100 (MQ=11)
   cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGGTtccga                                                                                                 >  1:3878326/1‑100 (MQ=11)
    aGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggac                                                                                                >  1:2055858/1‑100 (MQ=11)
    aGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagac                                                                                                >  1:2128892/1‑100 (MQ=11)
     gACGCAGATAGCGACTCTGATGCGGACAGCAACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGCTTCAGATtcagaca                                                                                               >  1:6157858/1‑100 (MQ=11)
      acgcagatagcgattcagattcagatagcgattcagattCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacag                                                                                              >  1:70895/4‑100 (MQ=11)
       cgcagatagcgattcagattcagatagcgattcagattCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagc                                                                                             >  1:5074028/3‑100 (MQ=11)
         cagatagcgattcagattcagatagcgattcagattCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcga                                                                                           >  1:5099670/1‑100 (MQ=11)
          agatagcgattcagattcagatagcgattcagattcAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgac                                                                                          >  1:136103/1‑100 (MQ=11)
           gatagcgattcagattcagatagcgattcagattcaGACAGCGAATCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgact                                                                                         >  1:6202102/1‑100 (MQ=11)
             ccacgattcagatgcggacagcgactcagattcagacagCGACTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactca                                                                                       >  1:4275097/4‑100 (MQ=11)
              agcgattcagattcagatagcgattcagattcagacAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcag                                                                                      >  1:5635355/1‑100 (MQ=11)
                 gattcagatgcggaccgcgactcagattcagacagcgacTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacg                                                                                   >  1:3296446/4‑99 (MQ=1)
                 gattcagatgcggacagcgactcagattcagacagcgacTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacg                                                                                   >  1:6417749/4‑99 (MQ=1)
                  attcagatgcggacagcgactcagattcagacagcgacTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgc                                                                                  >  1:6536044/3‑98 (MQ=11)
                   ttcagatgcggacagcgactcagattcagacagcgacTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgca                                                                                 >  1:3691225/2‑100 (MQ=11)
                   ttcagatgcggacagcgactcagattcagacagcgacTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgca                                                                                 >  1:3413003/2‑100 (MQ=11)
                   cccagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgca                                                                                 >  1:1835496/3‑100 (MQ=11)
                     ttgatgcggacagcgactcagattcagacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga                                                                               >  1:19109/9‑100 (MQ=11)
                     gtccctcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcaga                                                                               >  1:4995412/9‑100 (MQ=1)
                     ctgatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcaga                                                                               >  1:4803347/9‑100 (MQ=1)
                     cagattcagatagcgattcagattcagacagcgactCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga                                                                               >  1:3371363/1‑100 (MQ=11)
                     cagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga                                                                               >  1:4880725/1‑100 (MQ=11)
                     cagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga                                                                               >  1:5606681/1‑100 (MQ=11)
                     cagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga                                                                               >  1:271277/1‑100 (MQ=11)
                     cagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga                                                                               >  1:3625557/1‑100 (MQ=11)
                     acgatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcaga                                                                               >  1:2479868/9‑100 (MQ=1)
                      tgatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcagat                                                                              >  1:4560807/8‑99 (MQ=1)
                      agatgcggacagcgattcagattcagacagcgactcAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagat                                                                              >  1:6014836/1‑99 (MQ=11)
                      agatgcggacagcgactcagattcagacagcgactcAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagat                                                                              >  1:222158/1‑99 (MQ=11)
                      agacgcagatagcgattcagattcagacagcgacttagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagac                                                                              >  1:6326369/6‑100 (MQ=11)
                      agacgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagac                                                                              <  1:2301266/95‑1 (MQ=11)
                      agacgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagac                                                                              >  1:785697/6‑100 (MQ=11)
                      agacgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagac                                                                              >  1:5359604/6‑100 (MQ=11)
                       tccccggacagcgactcagattcagacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagata                                                                             >  1:5690476/7‑98 (MQ=11)
                       gatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcagata                                                                             >  1:1466657/7‑98 (MQ=1)
                       gatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcagata                                                                             >  1:6070656/7‑98 (MQ=1)
                       gatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcagata                                                                             >  1:4443971/7‑98 (MQ=1)
                       gatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcagata                                                                             >  1:1203336/7‑98 (MQ=1)
                       gatgcggacagcgactcagattcagacagcgatccagaCGCAGATAGCGATTCAGAGTCAGATAGCGATTCAGATtcagacagcgactcagacgcagata                                                                             >  1:4627200/7‑98 (MQ=11)
                       gatgcggacagcgactcagattcagacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagaca                                                                             >  1:3524336/7‑100 (MQ=11)
                        tttcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatag                                                                            >  1:5242110/2‑100 (MQ=11)
                        cttcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatag                                                                            >  1:382451/2‑100 (MQ=11)
                        attcagatagcgattcagattcagacagcgactccgACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatag                                                                            >  1:1546070/1‑100 (MQ=11)
                        atgcagatagcgattcagatgcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagataa                                                                            <  1:1755614/97‑4 (MQ=11)
                         cccggacagcgactcagattcagacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGAGTCTGATgcggacagcgactcagacgcagataac                                                                           >  1:4120303/5‑96 (MQ=11)
                          gcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGTCGCAGATAGCGACTCTGATgcggacagcgactcagattcagacagca                                                                          <  1:6093572/99‑2 (MQ=11)
                           cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcggacgcagatagaga                                                                         >  1:4668028/1‑100 (MQ=11)
                           cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcatacgcagatcggaa                                                                         >  1:3201536/1‑94 (MQ=11)
                           cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagaga                                                                         >  1:5977526/1‑100 (MQ=11)
                           cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagaga                                                                         >  1:2023036/1‑100 (MQ=11)
                           cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacccagatagcga                                                                         >  1:3895029/1‑100 (MQ=11)
                            tgatagcgattcagattcagacagcgactcggaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagat                                                                        >  1:4755002/5‑99 (MQ=2)
                            taccagcgactcagattcagacggcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagattcagat                                                                        >  1:3737228/4‑93 (MQ=11)
                            cagtagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagat                                                                        >  1:6564087/5‑99 (MQ=11)
                            agatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagaaagagat                                                                        >  1:6225673/1‑99 (MQ=11)
                               tagcgattcagattcagacagcgactcaggCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagacagcgattca                                                                     >  1:5532150/2‑100 (MQ=11)
                               cagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagatcat                                                                     >  1:6474460/1‑96 (MQ=11)
                               cagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagatcat                                                                     >  1:5957025/1‑96 (MQ=11)
                               cagcgactcagattcagacagcggctcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagcgattct                                                                     >  1:1927634/1‑99 (MQ=11)
                                 cagattcagatgcggacagcgactcagaCGCAGATAGCGATTCAGATGCGGACAGCGACTCAGATtcagacagcgactcagacgcagacagcgactcaga                                                                   >  1:2547556/6‑100 (MQ=1)
                                    ccccagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgtctcagattcagacagcgattcagacgc                                                                >  1:2264120/4‑98 (MQ=11)
                                         gattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGGTTCAGACGCAGATa                                                           >  1:4919627/1‑100 (MQ=11)
                                          attcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAg                                                          >  1:4411475/1‑100 (MQ=11)
                                           cttagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAgc                                                         >  1:2829628/4‑99 (MQ=11)
                                           ctcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAgc                                                         >  1:2360375/2‑99 (MQ=11)
                                           cccagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAgc                                                         >  1:3723962/3‑99 (MQ=11)
                                            tcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGACTCTGATgcggacagcgactcagacgcagacagcgactcaaacggatatagcg                                                        >  1:1687927/1‑90 (MQ=1)
                                            tcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCCGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGCTAgcg                                                        >  1:4050584/1‑98 (MQ=11)
                                            ccagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACTCAGATaccg                                                        >  1:1786268/2‑97 (MQ=11)
                                             cagatagcgattcagactcagatagcgattcagactCAGACAGCGATTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGAC‑CAGAtcggaag                                                      >  1:764268/1‑94 (MQ=14)
                                             cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGCCTCAGATTCAGACAGCGATTCAGACGCAGATAgcgg                                                       >  1:856205/1‑97 (MQ=11)
                                             cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGTAGATAGCGa                                                       >  1:2584932/1‑100 (MQ=11)
                                             cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtcggaa                                                       >  1:2912493/1‑95 (MQ=11)
                                             cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtcggaa                                                       >  1:4654024/1‑95 (MQ=11)
                                             cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                       >  1:6356067/1‑100 (MQ=11)
                                             cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                       >  1:1001205/1‑100 (MQ=11)
                                             cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                       >  1:4356750/1‑100 (MQ=11)
                                             cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                       >  1:4214952/1‑100 (MQ=11)
                                             cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                       >  1:3766845/1‑100 (MQ=11)
                                             cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                       >  1:3560387/1‑100 (MQ=11)
                                             cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                       >  1:2749259/1‑100 (MQ=11)
                                             cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa                                                       >  1:2109332/1‑100 (MQ=11)
                                              agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat                                                      >  1:1386390/1‑99 (MQ=11)
                                              agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat                                                      >  1:5387824/1‑99 (MQ=11)
                                              agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat                                                      >  1:4199004/1‑99 (MQ=11)
                                              agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat                                                      >  1:1525843/1‑99 (MQ=11)
                                              agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGAc                                                      >  1:2460327/1‑100 (MQ=11)
                                              agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAAACGCAGATAGCGat                                                      >  1:4943445/1‑99 (MQ=11)
                                                                                      aGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGACTCAAACGCCGATAGCGACTCTGCTGCGGATAACGACTCAGATGCAGACAGCGAttacg              >  1:3130173/1‑97 (MQ=2)
                                                                                                  tcagacagcgactcagactcagacagcgactcagacTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCg  >  1:401408/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
ATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCG  >  NC_007793/617874‑618071

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑