| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 617,968 | A→T | S1204S (TCA→TCT) | SAUSA300_RS02920 → | serine‑aspartate repeat‑containing protein D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 617,968 | 0 | A | T | 87.7% | 415.5 / 64.0 | 310 | S1204S (TCA→TCT) | SAUSA300_RS02920 | serine‑aspartate repeat‑containing protein D |
| Reads supporting (aligned to +/- strand): ref base A (36/2); new base T (264/8); total (300/10) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.53e-01 | |||||||||||
Only 100 of 340 total aligned reads displayed.
CAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGAT > NC_007793/617865‑618067 | tGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAt > 1:2736802/1‑100 (MQ=11) cttCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGACTCAGacgc > 1:3129927/2‑97 (MQ=11) actCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCagatagcgattcagattcagatagcgattcagattc > 1:4032001/3‑100 (MQ=11) actCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCagatagcgattcagattcagatagcgattcagattc > 1:266368/3‑100 (MQ=11) tCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcgg > 1:3889859/1‑96 (MQ=11) ccAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATCCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcgg > 1:2310599/2‑96 (MQ=11) ccAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGatagcgattcagattcagatagcgattcagattcag > 1:4727539/2‑100 (MQ=11) cAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcgga > 1:5898041/1‑95 (MQ=11) cAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcgga > 1:5554178/1‑95 (MQ=11) cAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcgga > 1:5472735/1‑95 (MQ=11) cAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcgga > 1:2440317/1‑95 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:1032054/1‑100 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:954901/1‑100 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:5214893/1‑100 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:2539620/1‑100 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:1067156/1‑100 (MQ=11) cAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGGTtccga > 1:3878326/1‑100 (MQ=11) cgACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggac > 1:6110771/2‑100 (MQ=11) aGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggac > 1:2055858/1‑100 (MQ=11) acagatagcgattcagattcagatagcgattcagattCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcg > 1:4652333/2‑100 (MQ=11) cagatagcgattcagattcagatagcgattcagattCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcga > 1:5099670/1‑100 (MQ=11) agatagcgattcagattcagatagcgattcagattcAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgac > 1:136103/1‑100 (MQ=11) agatagcgattcagattcagatagcgattcagattcAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgac > 1:4414208/1‑100 (MQ=11) agatagcgattcagattcagatagcgattcagattcAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgac > 1:2897396/1‑100 (MQ=11) aGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgac > 1:3324900/1‑100 (MQ=11) tAGCGATTCAGATGCGGACAGCGACTCAGATTCAGACAGCGACTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactca > 1:75864/1‑100 (MQ=11) agcgattcagattcagatagcgattcagattcagacAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcag > 1:4783615/1‑100 (MQ=11) gattcagatgcggacagcgactcagattcagacagcgacTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacg > 1:6417749/4‑99 (MQ=1) attcagatgcggacagcgactcagattcagacagcgacTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgc > 1:6536044/3‑98 (MQ=11) tcagatgcggacagcgactcagattcagacagcgacTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcag > 1:2095352/1‑100 (MQ=11) tcagatgcggacaacgactcagattcagacagcgacTCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagactcag > 1:1998711/1‑100 (MQ=11) ccagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcag > 1:530748/2‑100 (MQ=11) ttgatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcaga > 1:6351246/9‑100 (MQ=1) tagatgcggacagcgactcagattcagacagcgactcAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga > 1:5065382/2‑100 (MQ=11) gtccctcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcaga > 1:4995412/9‑100 (MQ=1) ctgatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcaga > 1:1558912/9‑100 (MQ=1) cagattcagatagcgattcagattcagacagcgactCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgtata > 1:1820499/1‑95 (MQ=11) cagattcagatagcgattcagattcagacagcgactCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga > 1:2463819/1‑100 (MQ=11) cagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga > 1:4913622/1‑100 (MQ=11) cagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga > 1:5606681/1‑100 (MQ=11) cagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga > 1:6218569/1‑100 (MQ=11) cagatgcggacagcgactcagattcagacagcgactCAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaga > 1:4064416/1‑100 (MQ=11) tgatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcagat > 1:620133/8‑99 (MQ=1) tgatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcagat > 1:4560807/8‑99 (MQ=1) cgacgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagac > 1:2794166/6‑100 (MQ=11) cgacgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagac > 1:4654748/6‑100 (MQ=11) agattcagatagcgattcagattcagacagcgactcAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactccgacgcagaa > 1:789854/1‑99 (MQ=11) agatgcggacagcgactcagattcagacagcgactcAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactccgacgcagat > 1:6073531/1‑99 (MQ=11) agatgcggacagcgactcagattcagacagcgactcAGACGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagat > 1:222158/1‑99 (MQ=11) agacgcagatagcgattcagattcagacagcgacttagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagac > 1:6326369/6‑100 (MQ=11) agacgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagat > 1:3244296/6‑99 (MQ=1) agacgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagac > 1:4158116/6‑100 (MQ=11) gatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcagata > 1:1466657/7‑98 (MQ=1) gatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcagata > 1:3540667/7‑98 (MQ=1) gatgcggacagcgactcagattcagacagcgattcagaCGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagacagcgactcagacgcagata > 1:4443971/7‑98 (MQ=1) cttcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatag > 1:382451/2‑100 (MQ=11) ccgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagacag > 1:5972726/4‑100 (MQ=11) cgcagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGGCGCAGATAGCGACTCTGATgcggacagcgactcagattcagacagc > 1:1925911/3‑100 (MQ=11) cccagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagatttagacaga > 1:43697/3‑99 (MQ=11) gcagatagcggttcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagacagcg > 1:1406670/2‑100 (MQ=11) cggacagcgactcagattcaggcagcgacccagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagcga > 1:2964335/3‑100 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGTAGATAGCGACTCTGATgcggacagcgactcagacgcagatcggaa > 1:1781945/1‑94 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGCCTCTGATgcggacagcgactcagacacagatcggaa > 1:2701448/1‑94 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcatacgcagatcggaa > 1:3201536/1‑94 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagattcagacagcga > 1:6003270/1‑100 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcaggagatcg > 1:3942137/1‑93 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagaga > 1:3716697/1‑100 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagaga > 1:5784063/1‑100 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagaga > 1:5939238/1‑100 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagaga > 1:6016649/1‑100 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagaga > 1:3733211/1‑100 (MQ=11) cagatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagaga > 1:2124949/1‑100 (MQ=11) cagtagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagat > 1:6564087/5‑99 (MQ=11) agatagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagat > 1:5645426/1‑99 (MQ=11) cagcgattcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagatcat > 1:6474460/1‑96 (MQ=11) ccccagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgtctcagattcagacagcgattcagacgc > 1:2264120/4‑98 (MQ=11) ctcagattcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggacagcgactcagacgcagatagagatcataatgac > 1:5038346/1‑90 (MQ=11) ctgatgcggacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCTGATGCGGAcagcgactcagattcagacagcgactcagacgcaga > 1:6197889/9‑100 (MQ=11) ctctgcggacagcgactcagaCGCAGATAGCGACTCAGACGCAGATAGCGACTCAGATGCGGACAGCGACTCTGATTCAGACAGCGATTCAGACGCAGAt > 1:185537/8‑100 (MQ=11) ttcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGACGCGGACAGCGACTCAGACTCAGACAGCGATTCAGACGCAGATAgc > 1:419951/1‑99 (MQ=11) ttcagacagcgactcagaCGCAGATAGCGAATCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtcgg > 1:3401476/1‑97 (MQ=11) ctcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAgc > 1:2360375/2‑99 (MQ=11) tcagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACACAGATTCAGACAGCGATTCAGACGCAGATAgcg > 1:4808026/1‑98 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGCCTCAGATTCAGACAGCGATTCAGACGCAGATAgcgg > 1:856205/1‑97 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCGGACGCAGATAGCGa > 1:4924463/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGTAGATAGCGa > 1:2584932/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:1001205/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:775348/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:681901/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:5702202/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:1215674/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:3675258/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:4282678/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:4234703/1‑100 (MQ=11) cagacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGa > 1:3766845/1‑100 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:5387824/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:1698085/1‑99 (MQ=11) agacagcgactcagaCGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGat > 1:1525843/1‑99 (MQ=11) ggcctcagaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACACAGATAGTGACtccgaatcagat > 1:3475074/4‑100 (MQ=11) ccAGATAGCGATTCAGATTCAGACAGCGCCTCAGACGCAGATAGCGATTCAGGTGCGGACAGCGATTCAGACGCAGATAGCGATTCTGATGTGGACAgat > 1:3579915/2‑98 (MQ=0) | CAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGAT > NC_007793/617865‑618067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |