| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 617,882 | T→G | S1176A (TCA→GCA) | SAUSA300_RS02920 → | serine‑aspartate repeat‑containing protein D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 617,882 | 0 | T | G | 80.0% | 78.6 / 45.9 | 100 | S1176A (TCA→GCA) | SAUSA300_RS02920 | serine‑aspartate repeat‑containing protein D |
| Reads supporting (aligned to +/- strand): ref base T (18/2); new base G (78/2); total (96/4) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.11e-06 | |||||||||||
Only 100 of 106 total aligned reads displayed.
AGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGAC‑TCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACA > NC_007793/617786‑617978 | tcagacagaGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGAGACTCAGATAACGATTCAGAC‑TCAg > 1:4942070/9‑100 (MQ=14) cagaTAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGAGACTCAGATAGTGATTCAGAC‑TCAGATagcgactcagattcagacagcgactcaga > 1:4453665/1‑100 (MQ=14) cagaCAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGAC‑TCAGATagcgactcagattcagacagcgactcaga > 1:2519958/1‑100 (MQ=255) cagaCAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGAC‑TCAGATagcgactcagattcagacagcgactcaga > 1:5317757/1‑100 (MQ=255) gatagcgactcagattcagacagcgactcagattcagacCGAGACTCAGATCGTGATTCAGAC‑TCAGATagcgactctgattcagacagcgactcaaact > 1:5024576/4‑96 (MQ=11) cttcagattcagaTAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGAC‑TCAGATAGcgactcagattcagacagcgactcagattcagacag > 1:5572769/2‑100 (MQ=255) cagattcagacAGCGACTCAGATTCAGACAGAGACTCAGATAGTGATTCAGAC‑TCAGATAGCGActcagattcagacagcgactcagactcagacagcga > 1:1068877/1‑100 (MQ=255) tttcagatAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGAC‑TCAGATAGCGACTCagagtcagacagcgactccgatacagacagagactc > 1:4497200/2‑100 (MQ=18) tccagacAGCGACTCAGATTCAGACAGAGACTCAGATAGTGATTCAGAC‑TCAGATAGCGACTCAgattcagacagcgactcagactcagacagcgactca > 1:5367754/3‑100 (MQ=14) cagatAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGAC‑TCAGATAGCGACTCAGAttcagacagcgactcagattcagacagagactcaga > 1:1054883/1‑100 (MQ=255) cagacAGCGACTCAGATTCAGACAGAGACTCAGATAGTGATTCAGAC‑TCAGATAGCGACTCAGAttcagacagcgactcagactcagacagcgactcaga > 1:912072/1‑100 (MQ=255) agacAGCGACTCAGATTCAGACAGAGACTCAGATAGTGATTCAGAC‑TCAGATAGCGACTCAGATtcagacagcgactcagactcagacagcgactcagac > 1:4570267/1‑100 (MQ=255) cagattcagaCAGAGACTCAGATAGTGATTCAGAC‑TCAGATAGCGCCTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAATGa > 1:6540173/1‑100 (MQ=255) attcagaCAGAGACTCAGATAGTGATTCAGAC‑TCAGATAGCGACTCAGATCCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTgcctc < 1:519173/100‑5 (MQ=255) gcgactcagaCGCAGATAGCGATTCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCTGa > 1:1025631/8‑100 (MQ=11) tgactcagaCGCAGATAGCGATTCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCTGat > 1:3554528/7‑99 (MQ=11) ggactcagaCGCAGATAGCGATTCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGaa > 1:5210804/7‑99 (MQ=11) cacagaGACTCAGATAGTGATTCAGAC‑TCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAG‑‑‑‑‑‑AGACTCAGATAGTGATTCAGACTCAGATa > 1:1118769/2‑100 (MQ=11) ctcagaCGCAGATAGCGATTCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGACTCAGACGCAGATAACGATTCTGatgcg > 1:3856616/4‑96 (MQ=11) tcagaCGCAGATAGCGATTCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATCCAGACAGCGATTCAGACGCAGATAGCGATTCTGatgcgg > 1:1669619/3‑95 (MQ=2) cagacgcagatagcgactcagac‑gcagatagcgactcTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGAttcagattcaga > 1:1251213/2‑100 (MQ=11) cagacgcagatagcgactcagac‑gcagatagcgactcTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGAttcagattcaga > 1:5346201/2‑100 (MQ=11) cagacgcagatagcgactcagac‑gcagatagcgactcTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGAttcagattcaga > 1:3841355/2‑100 (MQ=11) cagacgcagatagcgactcagac‑gcagatagcgactcTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGAttcagattcaga > 1:6111229/2‑100 (MQ=11) cagacgcagatagcgactcagac‑gcagatagcgactcCGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGAttcagattcaga > 1:3862020/2‑100 (MQ=11) cagaCGCAGATAGCGATTCAGAC‑GCAGATAGCGACTCTGATGCGGCCAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGAttcagattcaga > 1:3413160/2‑100 (MQ=11) cagaCGCAGATAGCGATTCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGAttcagattcaga > 1:3410782/2‑100 (MQ=11) tgaCGCAGATAGCGACTCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATtcagattcagat > 1:2642244/2‑100 (MQ=11) agaCGCAGATAGCGATTCAGAC‑GCAGATAGCGACTCTGGTGCGGACCGCGACTCAGATTCAGACAGCGTTTCAGACCCAGATCGCGATTCTGAcgcggac > 1:4377944/1‑94 (MQ=2) ctgtaGATAGCGACTCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAg > 1:447724/5‑100 (MQ=11) acgcAGATAGCGACTCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAg > 1:2626044/4‑100 (MQ=11) aCTCAGATAGTGATTCAGAC‑TCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAG‑‑‑‑‑‑AGACTCAGATAGTGATTCAGACTCAGATAGCGACTc < 1:3996226/100‑1 (MQ=11) ggcAGATAGCGACTCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGc > 1:1059459/3‑100 (MQ=11) cgcAGATAGCGACTCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGCTTCAGACGCAGATAGCGATTCCGATTCAGATAGc > 1:3265614/3‑100 (MQ=2) cgcAGATAGCGACTCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGc > 1:4352981/3‑100 (MQ=11) cTCAGATAGTGATTCAAACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTTATACAGatcggaagag > 1:4289340/1‑91 (MQ=1) cAGATAGTGATTCAGAC‑TCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAG‑‑‑‑‑‑AGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGa > 1:5930020/1‑100 (MQ=1) cAGATAGTGATTCAGAC‑TCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAG‑‑‑‑‑‑AGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGa > 1:4395133/1‑100 (MQ=1) acagcgATTCAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGGCTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTc > 1:2320458/6‑100 (MQ=11) acagcgATTCAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTc > 1:2098928/6‑100 (MQ=11) acagcgATTCAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTc > 1:4085531/6‑100 (MQ=11) acagcgATTCAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTc > 1:6045013/6‑100 (MQ=11) cggcgATTCAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTct > 1:329608/5‑99 (MQ=11) cagcgATTCAGAC‑GCAGATAGCGATTCAGCTTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTct > 1:4367310/5‑99 (MQ=11) ttgggggcAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAg < 1:5539819/93‑1 (MQ=11) agcgATTCAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTctg > 1:2593528/4‑98 (MQ=11) agcgATTCAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTctg > 1:2738141/4‑98 (MQ=11) tacaTTCAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGa > 1:1298552/4‑100 (MQ=11) ccgactCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCCGATAGCGATTCAGa > 1:6597731/6‑100 (MQ=11) ttactCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGAt > 1:5187928/5‑100 (MQ=11) tGATTCAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAt > 1:2736802/1‑100 (MQ=11) tGACTCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGAt > 1:5919489/1‑100 (MQ=11) gactCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGcagatagcgattcagattcagatagcgattcagatt > 1:787194/4‑100 (MQ=11) gctCAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgc > 1:341938/3‑98 (MQ=11) cttCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGACAGCGACTCAGacgc > 1:3129927/2‑97 (MQ=11) actCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCagatagcgattcagattcagatagcgattcagattc > 1:266368/3‑100 (MQ=11) actCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCagatagcgattcagattcagatagcgattcagattc < 1:6198703/98‑1 (MQ=11) acccAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCagatagcgattcagattcagatagcgattcagattc > 1:5743415/4‑100 (MQ=11) ttgtgAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcg > 1:3300524/5‑97 (MQ=11) tCAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcgg > 1:3889859/1‑96 (MQ=11) tCAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcgg > 1:6541576/1‑96 (MQ=11) tCAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGatagcgattcagattcagatagcgattcagattcag > 1:901823/1‑100 (MQ=11) tCAGAC‑GCAGATAGCGACTCAGATTCAGATAGCGACTCTGATGCGGACAGCGACTCAGACGCAGATAGCGCCTCAGACGCAGATAGCGACTCTGAtgcgg > 1:3029427/1‑96 (MQ=11) ccAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATCCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcgg > 1:2310599/2‑96 (MQ=11) ccAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGatagcgattcagattcagatagcgattcagattcag > 1:4727539/2‑100 (MQ=11) gcgAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcgga > 1:2706056/3‑95 (MQ=11) ccgAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcgga > 1:3114309/3‑95 (MQ=11) cAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcgga > 1:2440317/1‑95 (MQ=11) cAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcgga > 1:4271579/1‑95 (MQ=11) cAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcgga > 1:5898041/1‑95 (MQ=11) cAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcgga > 1:5554178/1‑95 (MQ=11) cAGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGAtgcgga > 1:5472735/1‑95 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGTGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:5847305/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCCGATAGCGATTCGGAATCAGATAGCGAATCAGATtcaga > 1:2641672/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:6536836/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:790622/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:954901/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:5214893/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:1032054/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:1032709/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:1051979/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:1067156/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:1949877/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:2539620/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:3365762/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:3725211/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:394926/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:4246522/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:5039958/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:5058777/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGAtagcgattcagattcagatagcgattcagattcaga > 1:5373475/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGGTtccga > 1:3878326/1‑100 (MQ=11) cAGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGACTCTGAtgcgga > 1:5991921/1‑95 (MQ=11) ggAC‑GCAGATAGCGATTCAGATTCAGATAACGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggac > 1:1505552/2‑100 (MQ=11) cgAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggac > 1:6110771/2‑100 (MQ=11) aGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggac > 1:3572147/1‑100 (MQ=11) aGAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggac > 1:2055858/1‑100 (MQ=11) aGAC‑GCAGATAGCGACTCTGATGCGGACAGCGACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGATTCAGATtcagac > 1:2128892/1‑100 (MQ=11) gAC‑GCAGATAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGCGACTCAGACGCAGATAGCGATTCAGACGCAGATAGCGACTCTGATgcggaca > 1:5968781/1‑100 (MQ=11) gAC‑GCAGATAGCGACTCTGATGCGGACAGCAACTCAGATTCAGACAGCGATTCAGACGCAGATAGCGATTCAGATTCAGATAGCGCTTCAGATtcagaca > 1:6157858/1‑100 (MQ=11) | AGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGAC‑TCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACA > NC_007793/617786‑617978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |