| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 62,533 | G→A | A19V (GCA→GTA) | SAUSA300_RS00270 ← | transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 62,533 | 0 | G | A | 100.0% | 10.6 / NA | 6 | A19V (GCA→GTA) | SAUSA300_RS00270 | transposase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (1/5); total (1/5) | |||||||||||
CTTTCCCCATTTCGATACCATCGCCACCAATTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGGAAATCCTGCTGCTTTCATTTCAACTGCTTTATACTTTGTTTCTACTGAATAAGAAGCTCTTTTCATAGAAAAAAACACCTCCGTA > NC_007793/62437‑62607 | cTTTCCCTATTTCGATACCATCGCCACCAAGTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGAAAATCCTGCTACtt < 1:368995/100‑1 (MQ=255)cTTTCCCTATTTCGATACCATCGCCACCAAGTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGAAAATCCTGCTACtt < 1:4056677/100‑1 (MQ=255) tACCATCGCCACCAAGTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGAAAATCCTGCTACTTTCATTTCAACTGCta < 1:5603318/100‑2 (MQ=255) gCCACCAAGTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGAAAATCCTGCTACTTTCATTTCAACTGCTTTATACtt < 1:2358190/100‑1 (MQ=255) cTAATATTTAATTCTTTCATAATTTCTTTTGTTGAAAATCCTGCTACTTTCATTTCAACTGCTTTATACTTTGTTTCTACTGAATAAGAAACTCTTTTCa > 1:2787583/1‑100 (MQ=255) aaTTTCTTTTGTTGAAAATCCTGCTACTTTCATTTCGACTGCTTTATACTTTGTTTCTACTGAATAAGAAACTCTTTTCATAGAAAAAAACACCTCCGtc < 1:722948/100‑2 (MQ=255) | CTTTCCCCATTTCGATACCATCGCCACCAATTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGGAAATCCTGCTGCTTTCATTTCAACTGCTTTATACTTTGTTTCTACTGAATAAGAAGCTCTTTTCATAGAAAAAAACACCTCCGTA > NC_007793/62437‑62607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |