Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 62,522 G→A P23S (CCA→TCA)  SAUSA300_RS00270 ← transposase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00779362,5220GA100.0% 14.7 / NA 7P23S (CCA→TCA) SAUSA300_RS00270transposase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (1/6);  total (1/6)

TATAACTTTCCCCATTTCGATACCATCGCCACCAATTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGGAAATCCTGCTGCTTTCATTTCAACTGCTTTATACTTTGTTTCTACTGAATAAGAAGCTCTTTTCATAGAAAAAAACACCTCCGTA  >  NC_007793/62432‑62607
                                                                                          |                                                                                     
ccgatcTTTCCCCATTTCGATACCATCGCCACCAAGTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGAAAATCctgc                                                                              <  1:2233825/95‑1 (MQ=255)
     cTTTCCCTATTTCGATACCATCGCCACCAAGTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGAAAATCCTGCTACtt                                                                         <  1:368995/100‑1 (MQ=255)
     cTTTCCCTATTTCGATACCATCGCCACCAAGTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGAAAATCCTGCTACtt                                                                         <  1:4056677/100‑1 (MQ=255)
                    tACCATCGCCACCAAGTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGAAAATCCTGCTACTTTCATTTCAACTGCta                                                          <  1:5603318/100‑2 (MQ=255)
                           gCCACCAAGTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGAAAATCCTGCTACTTTCATTTCAACTGCTTTATACtt                                                   <  1:2358190/100‑1 (MQ=255)
                                                        cTAATATTTAATTCTTTCATAATTTCTTTTGTTGAAAATCCTGCTACTTTCATTTCAACTGCTTTATACTTTGTTTCTACTGAATAAGAAACTCTTTTCa                      >  1:2787583/1‑100 (MQ=255)
                                                                            aaTTTCTTTTGTTGAAAATCCTGCTACTTTCATTTCGACTGCTTTATACTTTGTTTCTACTGAATAAGAAACTCTTTTCATAGAAAAAAACACCTCCGtc  <  1:722948/100‑2 (MQ=255)
                                                                                          |                                                                                     
TATAACTTTCCCCATTTCGATACCATCGCCACCAATTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGGAAATCCTGCTGCTTTCATTTCAACTGCTTTATACTTTGTTTCTACTGAATAAGAAGCTCTTTTCATAGAAAAAAACACCTCCGTA  >  NC_007793/62432‑62607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑