Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 62,467 T→G N41T (AAT→ACT)  SAUSA300_RS00270 ← transposase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00779362,4670TG100.0% 15.5 / NA 8N41T (AAT→ACT) SAUSA300_RS00270transposase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (0/8);  total (0/8)

ATAACCGTAGGTATATTGTTTACCAACATGTTGTGAAAATCTATAACTTTCCCCATTTCGATACCATCGCCACCAATTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGGAAATCCTGCTGCTTTCATTTCAACTGCTTTATACTT  >  NC_007793/62391‑62558
                                                                            |                                                                                           
tttgccGTAGGTATATTGTTTACCAACTTGTTGTGAAAATCTATAACTTTCCCTATTTCGATACCATCGCCACCAAGTTTTCACTTGTGTTCTATTTCTa                                                                      <  1:1103939/96‑1 (MQ=37)
      gTAGGTATATTGTTTACCAACTTGTTGTGAAAATCTATAACTTTCCCTATTTCGATACCATCGCCACCAAGTTTTCACTTGTGTTCTATTTCTAATAttt                                                                <  1:2900976/100‑1 (MQ=38)
                             gttgtGAAAATCTATAACTTTCCCTATTTCGATACCATCGCCACCAAGTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTttgt                                         <  1:4121267/100‑1 (MQ=255)
                                         ccgatcTTTCCCCATTTCGATACCATCGCCACCAAGTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGAAAATCctgc                             <  1:2233825/95‑1 (MQ=255)
                                              cTTTCCCTATTTCGATACCATCGCCACCAAGTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGAAAATCCTGCTACtt                        <  1:368995/100‑1 (MQ=255)
                                              cTTTCCCTATTTCGATACCATCGCCACCAAGTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGAAAATCCTGCTACtt                        <  1:4056677/100‑1 (MQ=255)
                                                             tACCATCGCCACCAAGTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGAAAATCCTGCTACTTTCATTTCAACTGCta         <  1:5603318/100‑2 (MQ=255)
                                                                    gCCACCAAGTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGAAAATCCTGCTACTTTCATTTCAACTGCTTTATACtt  <  1:2358190/100‑1 (MQ=255)
                                                                            |                                                                                           
ATAACCGTAGGTATATTGTTTACCAACATGTTGTGAAAATCTATAACTTTCCCCATTTCGATACCATCGCCACCAATTTTTCACTTGTGTTCTATTTCTAATATTTAATTCTTTCATAATTTCTTTTGTTGGAAATCCTGCTGCTTTCATTTCAACTGCTTTATACTT  >  NC_007793/62391‑62558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑