D3A :: BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,623,498	0	T	A	76.8%	188.7 / 50.2	113	intergenic (‑4/+1418)	SAUSA300_RS13500/SAUSA300_RS13505	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (3/23); new base A (1/85); total (4/109)
Fisher's exact test for biased strand distribution p-value = 3.84e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.56e-02

Only 100 of 160 total aligned reads displayed.

TGTTTCAAACGGTATCTCTACTGTTTTTGTTTCTGGTGTACCCGTTTTTGGTCCGTGTTTAATCACATCATCCACTGGCTCTTCGATCACTTTTCCTGTGTCTGGATTCTTGATTCCTGGTTTACCTGGTACTTTTTCCGTTTGATCTGTGGGTAAGTTTGGATCAAAGATATCTTTATGACCTTGCGGTAT  >  NC_007793/2623405‑2623596

tGTTTCAAACGGTATCTCTACTGTTTTTGTTTCTGGTGTACCCGTTTTTGGTCCGTGTTTAATCACATCATCCACTGGCTCTTCGATCACTTTTCCtggg                                                                                              <  1:1400849/100‑3 (MQ=255)

  tttCAAACGGTATCTCTACTGTTTTTGTTTCTGGTGTACCCGTTTTTGGTCCGGGTTTAATCACATCATCCACTGGCTCTTCGATCACTTTTCCTGTGTc                                                                                            <  1:5949617/100‑1 (MQ=255)

   ttCAAACGGTATCTCTACTGTTTTTGTTTCTGGTGTACCCGTTTTTGGTCCGTGTTTAATCACATCATCCACTGGCTCTTCGATCACTTTTCCTGTGTCt                                                                                           <  1:1152925/100‑1 (MQ=255)

   ttCAAACGGTATCTCTACTGTTTTTGTTTCTGGTGTACCCGTTTTTGGTCCGTGTTTAATCACATCATCCACTGGCTCTTCGATCACTTTTCCTGTGTCt                                                                                           <  1:1759627/100‑1 (MQ=255)

   ttCAAACGGTATCTCTACTGTATTTGTTTCTGGTGTACCCGTTTTTGGTCCGTGTTTAATCACATCATCCACTGGCTCTTCGATCACTTTTCCTGTGTCt                                                                                           <  1:4293701/100‑1 (MQ=255)

    tCAAACGGTATCTCTACTGTTTTTGTTTCTGGTGTACCCGTTTTTGGTCCGTGTTTAATCACATCATCCACTGGCTCTTCGATCACTTTTCCTGTGTCTg                                                                                          <  1:1758041/100‑1 (MQ=255)

     cAAACGGTATCTCTACTGTTTTTGTTTCTGGTGTACCCGTTTTTGGTCCGTGTTTAATCACATCATCCACTGGCTCTTCGATCACTTTTCCTGTGTCTgg                                                                                         <  1:3603605/100‑1 (MQ=255)

     cAAACGGTATCTCTACTGTTTTTGTTTCTGGTGTACCCGTTTTTGGTCCGTGTTTAATCACATCATCCACTGGCTCTTCGATCACTTTTCCTGTGTCTgg                                                                                         <  1:3640241/100‑1 (MQ=255)

          ccgaTCTCTTCTGTTTTTGTTTCTGGTGTACCCGTTTTTGGTCCGTGTTTAATCACATCATCCACTGGCTCTTCGATCACTTTTCCTGTGTCTGGATTCt                                                                                    <  1:3581414/97‑1 (MQ=255)

                                                  gTCCGTGTTTAATTACATCATCCACTGGCTCTTCGATCGCTTTTCCTGTGTCTGGATTCTTGATTCCTGTGTTACCTGGTACTTTTTCCGTTTGATCtgt                                            <  1:6465526/100‑1 (MQ=255)

                                                      gtgtTTAATCACATCATCCACTGGCTCTTCGATCACTTTTCCTGTGTCTGGATTCTTGATTCCTGGTTTACCTGGTACTTTTTCCGTTTGATCTGTTGGt                                        <  1:4762037/100‑1 (MQ=255)

                                                      gtgtTTAATCACATCATCCACTGGCTCTTCGATCACTTTTCCTGTGTCTGGATTCTTGATTCCTGGTTTACCTGGTACTTTTTCCGTTTGATCTGTTGGt                                        <  1:6578116/100‑1 (MQ=255)

                                                      gtgtTTAATCACATCATCCACTGGCTCTTCGATCACTTTTCCTGTGTCTGGATTCTTGATTCCTGGTTTACCTGGTACTTTTTCCGTTTGATCTGTTGGt                                        <  1:6101237/100‑1 (MQ=255)

                                                       tgtCTAATCACATCATCCACTGGCTCTTCGATCACTTTTCCTGTGTCTGGATTCTTGATTCCTGGTTTACCTGGTACTTTTTCCGTTTGATCTGTTGGTa                                       <  1:3362945/100‑1 (MQ=255)

                                                               cacaTCATCCACTGGCTCTTCGATCACTTTTCCTGTGTCTGGATTCTTGATTCCTGGTTTACCTGGTACTTTTTCCGTTTGATCTGTTGGTAAGTTTGGa                               >  1:3517445/1‑100 (MQ=255)

                                                                   ctttcCACTGGCTCTTCGATCACTTTTCCTGTGTCTGGATTCTTGATTCCTGGTTTACCTGGTACTTTTTCCGTTTGATCTGTTGGTAAGTTTGGATCaa                           <  1:6186290/97‑1 (MQ=255)

                                                                     atcCACTGGCTCTTCGATCACTTTTCCTGTGTCTGGATTCTTGATTCCTGGTTTACCTGGTACTTTTTCCGTTTGATCTGTCGGTAAGATCGGaagagca                         >  1:2735537/1‑94 (MQ=38)

                                                                             gaggtgttaccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAGGTTTGGATCGAACTCATCttt                 <  1:2752051/90‑1 (MQ=255)

                                                                             ccgatcttaccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCttt                 <  1:4715695/90‑1 (MQ=255)

                                                                               ctcttccgatcTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTTCCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTAt               <  1:6039482/90‑1 (MQ=255)

                                                                                    taccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCt          >  1:4271044/4‑100 (MQ=255)

                                                                                     accACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCtt         <  1:5989675/98‑1 (MQ=255)

                                                                                     accACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCta         <  1:2611826/98‑2 (MQ=255)

                                                                                     accACTTTACCTGTCTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCtg         <  1:4903698/98‑2 (MQ=255)

                                                                                      gatcTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCtat        <  1:2304712/97‑3 (MQ=255)

                                                                                      gatcTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTg        <  1:5689088/97‑1 (MQ=255)

                                                                                      ctaCTTCTCCTGTGTCTGGATTCTTGATTCCTGGTTTACCTGGTACTTTTTCCGTTTGATCTGTTGGTAAGTTTGGATCAAAGATATCTTTATGACCTTg        <  1:5199806/98‑1 (MQ=255)

                                                                                      ccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCttt        <  1:5429747/99‑2 (MQ=255)

                                                                                      ccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCtta        <  1:3925010/99‑2 (MQ=255)

                                                                                      ccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTg        <  1:3260592/99‑1 (MQ=255)

                                                                                      ccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTg        <  1:2393108/99‑1 (MQ=255)

                                                                                      ccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTg        <  1:4519626/99‑1 (MQ=255)

                                                                                      ccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTg        <  1:4527681/99‑1 (MQ=255)

                                                                                      ccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTg        <  1:2195439/99‑1 (MQ=255)

                                                                                      ccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTg        <  1:3884680/99‑1 (MQ=255)

                                                                                      ccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTg        <  1:2740895/99‑1 (MQ=255)

                                                                                      ccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTg        <  1:5380516/99‑1 (MQ=255)

                                                                                      ccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTg        <  1:2932927/99‑1 (MQ=255)

                                                                                      ccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTg        <  1:3570072/99‑1 (MQ=255)

                                                                                      ccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTg        <  1:1675512/99‑1 (MQ=255)

                                                                                      ccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTg        <  1:5734373/99‑1 (MQ=255)

                                                                                      ccACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTg        <  1:342459/99‑1 (MQ=255)

                                                                                      ccACTTTACCTGTTTCTGGGTTCTTAAGGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTg        <  1:637339/99‑1 (MQ=255)

                                                                                      ccACTTTACCTGTTCCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTg        <  1:4854211/99‑1 (MQ=255)

                                                                                       cACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGGCCTTgt       <  1:1973132/100‑2 (MQ=255)

                                                                                       cACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTgt       <  1:5913714/100‑2 (MQ=255)

                                                                                       cACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTgt       <  1:478521/100‑2 (MQ=255)

                                                                                       cACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTgt       <  1:3363631/100‑2 (MQ=255)

                                                                                       cACTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTgg       <  1:6238428/100‑2 (MQ=255)

                                                                                        ctctttCCTGTGTCTGGATTCTTGATTCCTGGTTTACCTGGTACTTTTTCCGTTTGATCTGTTGGTAAGTTTGGATCAAAGATATCTTTATGACCTTgtc      <  1:3145676/97‑3 (MQ=255)

                                                                                        ccTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTgtt      <  1:5227127/99‑3 (MQ=255)

                                                                                        aCTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTgtg      <  1:5107141/100‑3 (MQ=255)

                                                                                        aCTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTgtg      <  1:1086701/100‑3 (MQ=255)

                                                                                        aCTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTgtg      <  1:1795072/100‑3 (MQ=255)

                                                                                        aCTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTgtg      <  1:4326793/100‑3 (MQ=255)

                                                                                        aCTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTgtg      <  1:4671697/100‑3 (MQ=255)

                                                                                        aCTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTgaa      <  1:6479725/100‑3 (MQ=255)

                                                                                         gatctCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCCTTATGACCTTGTgg     <  1:552145/96‑1 (MQ=2)

                                                                                         cTTTCCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTAAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTgg     <  1:1198294/100‑1 (MQ=255)

                                                                                         cTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTGCTTCTTCTGTACCATCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTgg     <  1:6201759/100‑1 (MQ=255)

                                                                                         cTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTgtgc     <  1:4875083/100‑4 (MQ=255)

                                                                                         cTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTgtgc     <  1:4145529/100‑4 (MQ=255)

                                                                                         cTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTgtga     <  1:2499999/100‑4 (MQ=255)

                                                                                         cTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTgg     <  1:4276150/100‑1 (MQ=255)

                                                                                         cTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTgg     <  1:4943824/100‑1 (MQ=255)

                                                                                         cTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTgg     <  1:3593524/100‑1 (MQ=255)

                                                                                         cTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTgg     <  1:4476266/100‑1 (MQ=255)

                                                                                         cTTTACCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTgg     <  1:1323775/100‑1 (MQ=255)

                                                                                          ttttCCTGTGTCTGGATTCTTGATTCCTGGTTTACCTGGTACTTTTTCCGTTTGATCTGTTGGTAAGTTTGGATCAAAGATATCTTTATGACCTTGCGGt    <  1:765838/100‑1 (MQ=255)

                                                                                          ttttCCTGTGTCTGGATTCTTGATTCCTGGTTTACCTGGTACTTTTTCCGTTTGATCTGTTGGTAAGTTTGGATCAAAGATATCTTTATGACCTTGCGGt    <  1:83047/100‑1 (MQ=255)

                                                                                          ttttCCTGTGTCTGGATTCTTGATTCCTGGTTTACCTGGTACTTTTTCCGTTTGATCTGTTGGTAAGTTTGGATCAAAGATATCTTTATGACCTTGCGGt    <  1:5332459/100‑1 (MQ=255)

                                                                                          ttttCCTGTGTCTGGATTCTTGATTCCTGGTTTACCTGGTACTTTTTCCGTTTGATCTGTTGGTAAGTTTGGATCAAAGATATCTTTATGACCTTGCGGt    <  1:584544/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTTCTTCTTCTGTGCCGACAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTgtagt    <  1:6241628/100‑5 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCtaggtca    <  1:4799663/100‑7 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTggg    <  1:4942412/100‑2 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTggc    <  1:6274229/100‑2 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:6053864/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:6430940/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:819346/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:770907/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:6646614/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:921912/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:328120/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:111291/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:1227337/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:143996/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:1549523/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:223667/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:2876621/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:3142463/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:3265030/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:5705017/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:3457512/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:414051/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:423390/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:4993633/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:506255/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:5514649/100‑1 (MQ=255)

                                                                                          tttaCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:5562002/100‑1 (MQ=255)

                                                                                          ctctCCTGTTTCTGGGTTCTTAATGCCTGGTTTACCTGGTACTTCTTCTGTACCGTCAATTGGTAAGTTTGGATCGAACTCATCTTTATGACCTTGTGGt    <  1:5315225/97‑1 (MQ=255)

TGTTTCAAACGGTATCTCTACTGTTTTTGTTTCTGGTGTACCCGTTTTTGGTCCGTGTTTAATCACATCATCCACTGGCTCTTCGATCACTTTTCCTGTGTCTGGATTCTTGATTCCTGGTTTACCTGGTACTTTTTCCGTTTGATCTGTGGGTAAGTTTGGATCAAAGATATCTTTATGACCTTGCGGTAT  >  NC_007793/2623405‑2623596

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`