Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077931,101,3400AG78.2% 597.7 / 165.4 409I73I (ATT→ATC) SAUSA300_RS05410divalent metal cation transporter
Reads supporting (aligned to +/- strand):  ref base A (24/65);  new base G (2/317);  total (26/383)
Fisher's exact test for biased strand distribution p-value = 2.01e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.21e-01

Only 100 of 410 total aligned reads displayed.

TGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCAACAGCGACTAATA  >  NC_007793/1101244‑1101437
                                                                                                 |                                                                                                 
tGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATa                                                                                                >  1:3614371/1‑100 (MQ=255)
 tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GAtta                                                                                               <  1:2568799/98‑3 (MQ=255)
 tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GAtta                                                                                               <  1:1100696/98‑3 (MQ=255)
 tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GAtta                                                                                               <  1:3944312/98‑3 (MQ=255)
 tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GAtta                                                                                               <  1:4185788/98‑3 (MQ=255)
 tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GAtta                                                                                               <  1:5738627/98‑3 (MQ=255)
 tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GAtta                                                                                               <  1:1805962/98‑3 (MQ=255)
         atGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACg                                                                                       <  1:4598007/100‑1 (MQ=255)
         atGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACg                                                                                       <  1:4838100/100‑1 (MQ=255)
          tgacGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACgg                                                                                      <  1:1130824/97‑2 (MQ=255)
                         gCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGc                                                                       <  1:272242/100‑1 (MQ=255)
                          cTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGcc                                                                      <  1:928904/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATTCTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:4458517/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTATA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:5861104/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGACTAAG‑ATTACGAATAACAAGGTATAGcc                                                                      <  1:4674683/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑TATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:5180429/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACACGGTATAGcc                                                                      <  1:842248/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:1019785/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:4046451/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:300958/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:3416972/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:3437372/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:3845318/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:6094833/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:4111014/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:4326315/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:4644890/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:4734536/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:1627972/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:1884514/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:2142857/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:2297847/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:2493753/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGATATAGcc                                                                      <  1:2240123/100‑1 (MQ=255)
                          cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTGTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                      <  1:5775965/100‑1 (MQ=255)
                           tAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCa                                                                     <  1:3760666/100‑1 (MQ=255)
                            aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCat                                                                    <  1:5958255/97‑1 (MQ=255)
                            aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCat                                                                    <  1:5673782/97‑1 (MQ=255)
                            aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCat                                                                    <  1:321531/97‑1 (MQ=255)
                             aatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCata                                                                   <  1:2826383/98‑1 (MQ=255)
                             aatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCata                                                                   <  1:5523384/98‑1 (MQ=255)
                             aatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCata                                                                   <  1:1732658/98‑1 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTTGA‑GGTTAAGATTACGAATAACAAGGTATAGCCatag                                                                  <  1:121663/99‑2 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTCGA‑GATTAAGATTACGAATAACAAGGTATCGCCatat                                                                  <  1:6074279/99‑1 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                  <  1:2404184/99‑1 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                  <  1:2789425/99‑1 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                  <  1:2952745/99‑1 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                  <  1:5445037/99‑1 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                  <  1:3059950/99‑1 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                  <  1:3143389/99‑1 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                  <  1:4369581/99‑1 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                  <  1:6531920/99‑1 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                  <  1:422715/99‑1 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatag                                                                  <  1:1673592/99‑2 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatag                                                                  <  1:5575187/99‑2 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatag                                                                  <  1:700843/99‑2 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatag                                                                  <  1:1049190/99‑2 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCataa                                                                  <  1:3798282/99‑2 (MQ=255)
                              atCCATACCAGTTGCTATTCCTAATCGTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                  <  1:5208299/99‑1 (MQ=255)
                               tCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcccggct                                                                 <  1:6296587/100‑6 (MQ=255)
                               tCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATAtt                                                                 <  1:5801158/100‑1 (MQ=255)
                               tCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATAtt                                                                 <  1:1856705/100‑1 (MQ=255)
                                ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                                <  1:4063902/100‑1 (MQ=255)
                                ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                                <  1:1261371/100‑1 (MQ=255)
                                ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                                <  1:2172047/100‑1 (MQ=255)
                                ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                                <  1:5630255/100‑1 (MQ=255)
                                ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                                <  1:6150063/100‑1 (MQ=255)
                                ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                                <  1:3368674/100‑1 (MQ=255)
                                ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                                <  1:1591951/100‑1 (MQ=255)
                                  aTACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTgct                                                              <  1:6253137/100‑3 (MQ=255)
                                  aTACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTgat                                                              <  1:1935148/100‑3 (MQ=255)
                                   tACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatatcgagg                                                             <  1:6119408/100‑6 (MQ=255)
                                   tACCAGTTGCTATTCCTAATCTTACAGTCATACTTCGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTGTgc                                                             <  1:4147700/100‑1 (MQ=255)
                                    aCCAGTTGCTATTCTTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTggggg                                                            <  1:4966324/100‑3 (MQ=255)
                                    aCCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTGTgct                                                            <  1:5020361/100‑2 (MQ=255)
                                    aCCAGTTGCTATTCCTAATCTTACAGCCATACCTTGTAACAGCATAGCAGATCAGCTAGC‑GATTAAGATTACGAATACCAAGGTATAGCCATATTGTgct                                                            <  1:5415181/100‑2 (MQ=255)
                                     ccggTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTGTgctt                                                           <  1:1540256/97‑3 (MQ=255)
                                     ccagTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTgcacac                                                           <  1:3743387/97‑6 (MQ=255)
                                     ccagTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTGTgctt                                                           <  1:6475231/97‑3 (MQ=255)
                                     ccagTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTGTgctc                                                           <  1:2874245/97‑3 (MQ=255)
                                      cagTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTgcggtgt                                                          <  1:2474427/98‑7 (MQ=255)
                                         ttGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTGTGCTcctag                                                       <  1:3315288/100‑4 (MQ=255)
                                                      tctcACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGtt                                          <  1:3266429/100‑1 (MQ=255)
                                                        tcACTGTCATGCTTTGAAGCAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATCGCCATATTGGGCGCCACCTTGCATTGATGTTAt                                        >  1:3491147/1‑100 (MQ=255)
                                                         cACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATc                                       >  1:5351475/1‑100 (MQ=255)
                                                          catGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATcc                                      >  1:3174111/3‑100 (MQ=255)
                                                          aCTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATcc                                      <  1:1354062/100‑1 (MQ=255)
                                                                     ttGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCGCCTTGCATTGATGTTATCCAGTTTCCGGGa                           <  1:5983858/100‑1 (MQ=255)
                                                                     ttGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGa                           <  1:5257844/100‑1 (MQ=255)
                                                                            aaCATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGt                    <  1:6353930/100‑1 (MQ=255)
                                                                                ttGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAAcc                <  1:2075134/100‑1 (MQ=255)
                                                                                  gCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCac              <  1:6403318/100‑2 (MQ=255)
                                                                                  gCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCaa              <  1:5901798/100‑1 (MQ=255)
                                                                                  gCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCaa              >  1:4286931/1‑100 (MQ=255)
                                                                                    tGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCAAct            <  1:5071458/100‑2 (MQ=255)
                                                                                     gATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCAACAg           <  1:6018705/100‑1 (MQ=255)
                                                                                     gATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCAACAg           >  1:2002809/1‑100 (MQ=255)
                                                                                           cTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCAACAGCGACta     <  1:3561397/100‑1 (MQ=255)
                                                                                             tGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCAACAGCGACtaat   >  1:2604931/1‑100 (MQ=255)
                                                                                              gA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCAACAGCGACtaata  >  1:6576692/1‑100 (MQ=255)
                                                                                                 |                                                                                                 
TGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCAACAGCGACTAATA  >  NC_007793/1101244‑1101437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑