Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077931,101,3370TA79.4% 793.5 / 182.4 415S74S (TCA→TCT) SAUSA300_RS05410divalent metal cation transporter
Reads supporting (aligned to +/- strand):  ref base T (22/63);  new base A (2/326);  total (24/391)
Fisher's exact test for biased strand distribution p-value = 1.39e-14
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.73e-01

Only 100 of 416 total aligned reads displayed.

GTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCAACAGCGACTAAT  >  NC_007793/1101240‑1101436
                                                                                                 |                                                                                                    
gcttatttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGa                                                                                                    <  1:5240384/93‑1 (MQ=255)
    tGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATa                                                                                               >  1:3614371/1‑100 (MQ=255)
     tttaaaaaaTGACGTGTCATTTGTGCTAAGTCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GAtta                                                                                              <  1:5116906/98‑3 (MQ=255)
     tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GAtta                                                                                              <  1:4755801/98‑3 (MQ=255)
     tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GAtta                                                                                              <  1:1100696/98‑3 (MQ=255)
     tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GAtta                                                                                              <  1:4185788/98‑3 (MQ=255)
     tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GAtta                                                                                              <  1:1547466/98‑3 (MQ=255)
     tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GAtta                                                                                              <  1:2568799/98‑3 (MQ=255)
     tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GAtta                                                                                              <  1:3944312/98‑3 (MQ=255)
     tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GAtta                                                                                              <  1:1662512/98‑3 (MQ=255)
     tttaaaaaaTGACGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GAtta                                                                                              <  1:1716980/98‑3 (MQ=255)
             atGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACg                                                                                      <  1:4598007/100‑1 (MQ=255)
              tgacGTGTCATTTGTGCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACgg                                                                                     <  1:1130824/97‑2 (MQ=255)
                           gtgccaaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGtata                                                                        >  1:6322559/9‑100 (MQ=255)
                             gCTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGc                                                                      <  1:272242/100‑1 (MQ=255)
                              ttAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                     <  1:6370366/99‑1 (MQ=255)
                              cTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGcc                                                                     <  1:928904/100‑1 (MQ=255)
                              cTAAATCCATGCCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                     <  1:2266752/100‑1 (MQ=255)
                              cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGACTAAG‑ATTACGAATAACAAGGTATAGcc                                                                     <  1:4674683/100‑1 (MQ=255)
                              cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACACGGTATAGcc                                                                     <  1:842248/100‑1 (MQ=255)
                              cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                     <  1:4644890/100‑1 (MQ=255)
                              cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                     <  1:5774623/100‑1 (MQ=255)
                              cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                     <  1:4111014/100‑1 (MQ=255)
                              cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                     <  1:1019785/100‑1 (MQ=255)
                              cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                     <  1:5787044/100‑1 (MQ=255)
                              cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                     <  1:3845318/100‑1 (MQ=255)
                              cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                     <  1:6049483/100‑1 (MQ=255)
                              cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                     <  1:4046451/100‑1 (MQ=255)
                              cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                     <  1:3532440/100‑1 (MQ=255)
                              cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                     <  1:300958/100‑1 (MQ=255)
                              cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                     <  1:1884514/100‑1 (MQ=255)
                              cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                     <  1:1627972/100‑1 (MQ=255)
                              cTAAATCCATACCAGTTGCTATTCCTAATCTTACAGACATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGcc                                                                     <  1:5440589/100‑1 (MQ=255)
                               tAAATCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCa                                                                    <  1:3760666/100‑1 (MQ=255)
                                aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCat                                                                   <  1:2240073/97‑1 (MQ=255)
                                aaatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCat                                                                   <  1:5486109/97‑1 (MQ=255)
                                 aatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCata                                                                  <  1:2826383/98‑1 (MQ=255)
                                 aatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCata                                                                  <  1:3190885/98‑1 (MQ=255)
                                 aatCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCata                                                                  <  1:5946143/98‑1 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTTGA‑GGTTAAGATTACGAATAACAAGGTATAGCCatag                                                                 <  1:121663/99‑2 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGG‑GATTAAGATTACGAATAACAAGGTATAGCCatag                                                                 <  1:6112021/99‑2 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                 <  1:1602610/99‑1 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                 <  1:4333802/99‑1 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                 <  1:422715/99‑1 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                 <  1:2490934/99‑1 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                 <  1:6469161/99‑1 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                 <  1:3059950/99‑1 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                 <  1:3166104/99‑1 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                 <  1:1760917/99‑1 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                 <  1:339726/99‑1 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatat                                                                 <  1:2789425/99‑1 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatag                                                                 <  1:6512485/99‑2 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatag                                                                 <  1:5728977/99‑2 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatag                                                                 <  1:5575187/99‑2 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatag                                                                 <  1:5330156/99‑2 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatag                                                                 <  1:700843/99‑2 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatag                                                                 <  1:4394564/99‑2 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatag                                                                 <  1:5020836/99‑2 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatag                                                                 <  1:1049190/99‑2 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCatac                                                                 <  1:5670101/99‑2 (MQ=255)
                                  atCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCataa                                                                 <  1:3798282/99‑2 (MQ=255)
                                   tCCATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATAtt                                                                <  1:1856705/100‑1 (MQ=255)
                                    ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGAGAGTAAG‑ATTACGAATAACAAGGTATAGCCATATTg                                                               <  1:5884760/100‑1 (MQ=255)
                                    ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                               <  1:6082666/100‑1 (MQ=255)
                                    ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                               <  1:3247214/100‑1 (MQ=255)
                                    ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                               <  1:3368674/100‑1 (MQ=255)
                                    ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                               <  1:1261371/100‑1 (MQ=255)
                                    ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                               <  1:5630255/100‑1 (MQ=255)
                                    ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                               <  1:2470656/100‑1 (MQ=255)
                                    ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                               <  1:4063902/100‑1 (MQ=255)
                                    ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                               <  1:5394440/100‑1 (MQ=255)
                                    ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                               <  1:2172047/100‑1 (MQ=255)
                                    ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                               <  1:6136139/100‑1 (MQ=255)
                                    ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                               <  1:5182503/100‑1 (MQ=255)
                                    ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                               <  1:2142727/100‑1 (MQ=255)
                                    ccATACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                               <  1:5978596/100‑1 (MQ=255)
                                    ccATACCAGTTGCTATTCCTAATCTCACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTg                                                               <  1:2397897/100‑1 (MQ=255)
                                      aTACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTgat                                                             <  1:1935148/100‑3 (MQ=255)
                                       tACCAGTTGCTATTCCTAATCTTACAGTCATCCTTTGTAACAGCATAGCAGATAAGCTAGAGAGTAAG‑ATTACGAATAACAAGGTATAGCCATATTGTgc                                                            <  1:6537574/100‑1 (MQ=255)
                                       tACCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTgggt                                                            <  1:4495341/100‑2 (MQ=255)
                                       tACCAGTTGCTATTCCTAATCTTACAGTCATACTTCGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTGTgc                                                            <  1:4147700/100‑1 (MQ=255)
                                        aCCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTGTgct                                                           <  1:2915950/100‑2 (MQ=255)
                                        aCCAGTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCAAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTGTgct                                                           <  1:6257001/100‑2 (MQ=255)
                                         ccagTTGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTgcacac                                                          <  1:3743387/97‑6 (MQ=255)
                                             ttGCTATTCCTAATCTTACAGTCATACTTTGTAACAGCATAGCAGATAAGCTAGA‑GATTAAGATTACGAATAACAAGGTATAGCCATATTGTGCTcctag                                                      <  1:3315288/100‑4 (MQ=255)
                                                     ccTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTg                                              <  1:6202811/100‑1 (MQ=255)
                                                             cACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATc                                      >  1:2872839/1‑100 (MQ=255)
                                                             cACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATc                                      >  1:6008986/1‑100 (MQ=255)
                                                              aCTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATcc                                     <  1:1354062/100‑1 (MQ=255)
                                                                 ggcATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGt                                  <  1:343009/98‑1 (MQ=255)
                                                                        tttGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCggg                           <  1:3140660/100‑1 (MQ=255)
                                                                         ttGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGa                          >  1:499249/1‑100 (MQ=255)
                                                                         ttGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGa                          <  1:5257844/100‑1 (MQ=255)
                                                                            aaGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATcc                       <  1:3488524/100‑1 (MQ=255)
                                                                                    ttGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAAcc               <  1:2075134/100‑1 (MQ=255)
                                                                                    ttGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAAcc               <  1:5837768/100‑1 (MQ=255)
                                                                                      gCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCaa             >  1:4286931/1‑100 (MQ=255)
                                                                                         gATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCAACAg          >  1:2002809/1‑100 (MQ=255)
                                                                                            aaaCTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCAACAGCgg       <  1:4872964/100‑2 (MQ=255)
                                                                                                 tGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCAACAGCGACtaat  >  1:2604931/1‑100 (MQ=255)
                                                                                                 |                                                                                                    
GTCTTGATAAATAATGTCGTGTCATTTGAGCTAAGTCCATACCTGTTGCTATTCCTAATCTCACTGTCATGCTTTGAAGTAACATTGCTGATAAACTTGA‑AATAAGAATTACGAATAGCAAAGTATAGCCATATTGGGCGCCACCTTGCATTGATGTTATCCAGTTTCCGGGATCCATGTAACCAACAGCGACTAAT  >  NC_007793/1101240‑1101436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑