Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	2495993	2496037	45	2 [0]	[0] 3	SAUSA300_RS12830/SAUSA300_RS12835	phage infection protein/TetR family transcriptional regulator

AAGTGGGAATAAACAATACACAATGTTCATCAATACGTTCATTAATAGACAAATACACCCACATTGTTCAATAACACAAGGAGGTTGATTTATTTTTGAAA  >  NC_007793/2496037‑2496137  |                                                                                                    caGTGGGAATAAACAATACACAATGTTCATCAATACGTTCATTAATAGACAAATACACCCACATTGTTCAATAACACAAGGAGGTTGATTTATTTTTGaa   >  1:3749968/2‑100 (MQ=255) caGTGGGAATAAACAATACACAATGTTCATCAATACGTTCATTAATAGACAAATACACCCACATTGTTCAATAACACAAGGAGGTTGATTTATTTTTGaa   >  1:537579/2‑100 (MQ=255)  aGTGGGAATAAACAATACACAATGGTCATCAATACGGTCATTAATAGACAAATACACCCACATTGTTCAATAACACAAGGAGGTTGATTTATTTTTGaaa  >  1:5007079/1‑100 (MQ=255)  |                                                                                                    AAGTGGGAATAAACAATACACAATGTTCATCAATACGTTCATTAATAGACAAATACACCCACATTGTTCAATAACACAAGGAGGTTGATTTATTTTTGAAA  >  NC_007793/2496037‑2496137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑