Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	2197579	2197586	8	1 [0]	[0] 1	SAUSA300_RS11200	histidine kinase

TTTAATTGTGAAGAATATTATGATATTGCTATCGAGGTGAAGGTTATGTCAAACACTGAATCGCTAAACATAGGAAAAAAGCGTGGATCTTTAACAATTT  >  NC_007793/2197479‑2197578                                                                                                    | tttAATTGTGAAGAATATTATGATAGTGCTATCGAGGTGAAGGTTATGTCAAACACTGAATCGCTAAACATAGGAAAAAAGCGTGGATCTTTAACAAttt  <  1:464112/100‑1 (MQ=255)                                                                                                    | TTTAATTGTGAAGAATATTATGATATTGCTATCGAGGTGAAGGTTATGTCAAACACTGAATCGCTAAACATAGGAAAAAAGCGTGGATCTTTAACAATTT  >  NC_007793/2197479‑2197578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑