Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	2088197	2088245	49	1 [0]	[0] 1	SAUSA300_RS10535/SAUSA300_RS10540	peptidoglycan hydrolase/staphylokinase

CAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAGCCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGA  >  NC_007793/2088097‑2088196                                                                                                    | cgaGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAGCAAAAAACTAGCCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCTTTGa  <  1:2948823/98‑1 (MQ=255)                                                                                                    | CAAGGATAGATGTAAATAGTTGATGCATGTGTAACACATCATAACAAAAAACTAGCCCGAAAGCTAGCTATAACATACAATCTAAAAAGACGTCCCTTGA  >  NC_007793/2088097‑2088196

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑