Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1978201	1978202	2	1 [0]	[0] 1	SAUSA300_RS09820/SAUSA300_RS09825	hypothetical protein/hypothetical protein

ATGATTACTCTACTAGATTTGCTCGGCAGTAATGACCAATTAGAAACTAAATGTCAAAACTATCATTGCACTTAATACGCCAAACATTTTCAGGCCGTTC  >  NC_007793/1978103‑1978202                                                                                                  |   aTGATTACTCTACTAGATTTGCTCGGCAGTAATGACCAATTAGAAACTAAATGTCAAAACTATCATTGCACTTAATACGCCAAACATTTTCAGGCCGtat  <  1:5550866/100‑3 (MQ=255)                                                                                                  |   ATGATTACTCTACTAGATTTGCTCGGCAGTAATGACCAATTAGAAACTAAATGTCAAAACTATCATTGCACTTAATACGCCAAACATTTTCAGGCCGTTC  >  NC_007793/1978103‑1978202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑