Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1972590	1972613	24	1 [0]	[0] 1	SAUSA300_RS09800/SAUSA300_RS09805	foldase/3'‑5' exoribonuclease

CAAGGCGGACAATCCGGCATGAGCCAATAACACAAAACCGAGCGACCGTGGTTCAAAAATCATACCACGGCCGCTCGGTTTTTTCGCATTAAAAATCGGA  >  NC_007793/1972490‑1972589                                                                                                    | caAGGCGGACAATCCGGCATGAGCCAATAACACAAAACCGAGCGACCGTGGTTCAAAAATCATACCACGGCCGCTCGGTTTTTTCGCATTAAAAAACGGa  >  1:3218382/1‑100 (MQ=255)                                                                                                    | CAAGGCGGACAATCCGGCATGAGCCAATAACACAAAACCGAGCGACCGTGGTTCAAAAATCATACCACGGCCGCTCGGTTTTTTCGCATTAAAAATCGGA  >  NC_007793/1972490‑1972589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑