Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1413180	1413233	54	1 [0]	[0] 2	SAUSA300_RS14935/SAUSA300_RS06980	transposase/virulence factor B

GTACATTATAAAATACATATC‑AAAAAAGCTGATTTCCATCAAATAATTAATAGAAATCAGCTTTTTTACATTGCCTAAGAACTTAATGTCCCAGCCTAT  >  NC_007793/1413081‑1413179                                                                                                    | gTACATTATAAAATACATATCAAAAAAAGCTGATTTCCATCAAATAATTAATAGAAATCAGCTTTTTTACATTGCCTAAGAACTTAATGTCCCAGCCTAt  <  1:6647328/100‑1 (MQ=255)                                                                                                    | GTACATTATAAAATACATATC‑AAAAAAGCTGATTTCCATCAAATAATTAATAGAAATCAGCTTTTTTACATTGCCTAAGAACTTAATGTCCCAGCCTAT  >  NC_007793/1413081‑1413179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑