Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	48587	48587	1	1 [0]	[0] 1	SAUSA300_RS00205	recombinase RecA

GACTTGTTCTCCAATGTTATCCGATTCAAGTTCGGCTAAACTGATGAAGATATTAAGCTTGAGTCGGTCGAAAGCTTGATCCATATCAAAGTAACCATCA  >  NC_007793/48487‑48586                                                                                                    | gACTTGTTCTCCAATGTTATCCGATTCAAGTTCGGCTAAACTGATGAAGATATTAAGCTTGAGTCGGTCGAAAGCTTGATCCATATCAAAGTAACcatca  >  1:4624321/1‑100 (MQ=255)                                                                                                    | GACTTGTTCTCCAATGTTATCCGATTCAAGTTCGGCTAAACTGATGAAGATATTAAGCTTGAGTCGGTCGAAAGCTTGATCCATATCAAAGTAACCATCA  >  NC_007793/48487‑48586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑