D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,000,985	(C)_5→6	noncoding (1/76 nt)	SAUSA300_RS10045 ←	tRNA‑Ala

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,000,980	1	.	C	84.9%	233.8 / 61.8	127	noncoding (6/76 nt)	SAUSA300_RS10045	tRNA‑Ala
Reads supporting (aligned to +/- strand): ref base . (2/17); new base C (0/107); total (2/125)
Fisher's exact test for biased strand distribution p-value = 2.17e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.85e-02

Only 100 of 136 total aligned reads displayed.

TATCTAGTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑CCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGAGCTA  >  NC_007793/2000885‑2001073

 aTCTAGTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑ccc‑cc                                                                                          <  1:5526429/100‑1 (MQ=255)

 aTCTAGTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑ccc‑cc                                                                                          <  1:1311497/100‑1 (MQ=255)

 aTCTAGTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑ccc‑cc                                                                                          <  1:5950051/100‑1 (MQ=255)

 aTCTAGTTCCCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑ccc‑cc                                                                                          <  1:4875424/100‑1 (MQ=255)

  tCTAGTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑CCC‑CCa                                                                                         <  1:6151006/100‑1 (MQ=255)

    tAGTTTTCAATGTACAAATAATGGTGGAGACTAGTGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑CCC‑CCatg                                                                                       <  1:4389488/100‑3 (MQ=255)

    tAGTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑cccgccag                                                                                        <  1:296233/100‑6 (MQ=255)

    tAGTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑CCC‑CCcaa                                                                                       >  1:6368565/1‑100 (MQ=255)

    tAGTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑CCC‑CCata                                                                                       <  1:1753858/100‑3 (MQ=255)

    tAGTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑CCC‑CCagc                                                                                       <  1:4024677/100‑3 (MQ=255)

    tAGTTTCCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑ccc‑cctga                                                                                       <  1:2025673/100‑4 (MQ=255)

    gaGTTTTCAAGGTACAGATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑CCC‑CCtaa                                                                                       <  1:6546840/99‑1 (MQ=255)

     aGTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑CCC‑CCAGAt                                                                                      >  1:4748888/1‑100 (MQ=255)

      gTTTTCAATGTACAAATAATGGTGGAGTCTAGCGGGATCAAACCGATGACCTCTTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑CCC‑CCcaaat                                                                                     <  1:556173/100‑3 (MQ=17)

      gTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑ccc‑ccgcaca                                                                                     <  1:3800075/100‑6 (MQ=255)

      gTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑CCC‑CCcaaat                                                                                     <  1:2116084/100‑3 (MQ=255)

      gTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑CCC‑CCcaaat                                                                                     <  1:3549291/100‑3 (MQ=255)

      gTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑CCC‑CCcaaag                                                                                     <  1:4509744/100‑3 (MQ=255)

        tttCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑ccc‑cctggccta                                                                                   <  1:2156864/100‑8 (MQ=255)

         ttCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑CCC‑CCcaaatcat                                                                                  <  1:4215514/100‑6 (MQ=255)

          tCAATGTACAAATAATGGTGGAGGCTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGt                                                                                  <  1:2973524/100‑1 (MQ=255)

          tCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGTCCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAggc                                                                                  <  1:6031764/100‑2 (MQ=255)

          tCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGt                                                                                  <  1:900797/100‑1 (MQ=255)

          tCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGt                                                                                  <  1:2630193/100‑1 (MQ=255)

          tCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGt                                                                                  <  1:5868843/100‑1 (MQ=255)

          tCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGt                                                                                  <  1:5793908/100‑1 (MQ=255)

           cAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCCTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTa                                                                                 <  1:2808023/100‑1 (MQ=255)

           cAATGTACAAATAAGGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTa                                                                                 <  1:4896910/100‑1 (MQ=255)

           cAATGTACAAATAAGGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTa                                                                                 <  1:4943467/100‑1 (MQ=255)

            aaTGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTat                                                                                <  1:2192893/100‑1 (MQ=255)

             aTGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTCA‑GCCCC‑CCAAATAGGTatt                                                                               <  1:3857858/100‑1 (MQ=255)

             aTGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTatt                                                                               <  1:890602/100‑1 (MQ=255)

             aTGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTatt                                                                               <  1:2421511/100‑1 (MQ=255)

             aTGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTatt                                                                               <  1:2311641/100‑1 (MQ=255)

              tGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTattt                                                                              <  1:1977340/100‑2 (MQ=255)

              tGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTatta                                                                              <  1:4218607/100‑1 (MQ=255)

              tGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTatta                                                                              <  1:350892/100‑1 (MQ=255)

              tGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTatta                                                                              <  1:6471849/100‑1 (MQ=255)

               gTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTatta                                                                              <  1:4235690/100‑1 (MQ=17)

               gTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTattag                                                                             <  1:5034489/100‑2 (MQ=255)

                   aaaTAATGGTGGAGACTAGCGGGATCGAACAGCTGGCCACCTGCGTGC‑AAAGCAGGCGATCTCCCAGATGAGCTAA‑GCCCC‑CCAAATAGGTattaaatta                                                                         <  1:3487488/100‑1 (MQ=17)

                         tggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtg                                                                   <  1:3076759/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAGCCGCTGACCTCCTGCGTGC‑AAAGCAGGTGCGCTCCCATCTGAGCTAAGG‑CCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:3439578/100‑1 (MQ=17)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTTTCCCAGCTGAGCTAA‑GAGCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:6469265/100‑1 (MQ=17)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgt                                                                  <  1:398343/100‑2 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgt                                                                  <  1:6611509/100‑2 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgt                                                                  <  1:1957243/100‑2 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:5170165/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:912541/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:851639/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:6461901/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:6140970/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:5094619/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:60375/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:5736281/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:5237922/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:6027488/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:4221987/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:5826719/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:5284367/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:5791236/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:2059200/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:2304528/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:2322583/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:1934715/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:1464825/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:1017074/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:2511831/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:2669891/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:3902718/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:3643136/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:1478487/100‑1 (MQ=255)

                          ggtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgc                                                                  <  1:5071068/100‑2 (MQ=255)

                          ggtggAGACTAGCGGAATCGAACCGCTGACCTCCGGCGTGC‑AAAGCAGGCGATCTCCCAGCTGAGCTAA‑G‑CCCGCCAAATAGGTATTAAATTAAtggtgg                                                                  <  1:1608718/100‑1 (MQ=17)

                           gtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtggc                                                                 <  1:1022710/100‑2 (MQ=255)

                           gtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtggc                                                                 <  1:3194533/100‑2 (MQ=255)

                           gtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgga                                                                 <  1:1616067/100‑2 (MQ=255)

                           gtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgga                                                                 <  1:6342999/100‑2 (MQ=255)

                           gtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgag                                                                 <  1:2497057/100‑3 (MQ=255)

                           gtggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCCCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtgga                                                                 <  1:2586813/100‑2 (MQ=255)

                            tggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCCCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAAtggtggtc                                                                <  1:3985531/100‑3 (MQ=17)

                              gagaCTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCt                                                              <  1:1026009/100‑1 (MQ=255)

                                    aGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTgg                                                        <  1:337887/100‑1 (MQ=255)

                                       gggATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACt                                                     <  1:5446841/100‑1 (MQ=255)

                                         gATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCg                                                   <  1:5742671/100‑1 (MQ=255)

                                                        ctcctGCGTGC‑AATGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCAc                                    <  1:6559011/100‑1 (MQ=255)

                                                               gTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATc                             <  1:2756703/100‑1 (MQ=255)

                                                               gTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATc                             <  1:434097/100‑1 (MQ=255)

                                                                 gC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAg                           <  1:3356759/100‑1 (MQ=255)

                                                                    aaaGCAGGCGCTCTCCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAggg                         <  1:4490408/100‑2 (MQ=255)

                                                                                 tcCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAAcc            <  1:5983184/100‑1 (MQ=255)

                                                                                 tcCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAAcc            <  1:3099886/100‑1 (MQ=255)

                                                                                 tcCCAGCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAAcc            <  1:3626911/100‑1 (MQ=255)

                                                                                 gcccAGCGGAGCTAA‑GCCCC‑CCAAAGAGGTATTAAATTAAGGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAAcc            <  1:4551960/99‑1 (MQ=18)

                                                                                     atcTGTGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCt        <  1:4227612/98‑1 (MQ=17)

                                                                                      tcTGAGCGAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTg       <  1:893325/99‑1 (MQ=255)

                                                                                      gCTGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTg       <  1:621515/100‑1 (MQ=255)

                                                                                      atctggCTGA‑G‑CCCTCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTg       <  1:4872253/95‑1 (MQ=17)

                                                                                        tGAGCTAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGAg     <  1:4395590/100‑1 (MQ=255)

                                                                                           gCTAA‑GCCCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGAGCta  <  1:3507830/100‑1 (MQ=255)

TATCTAGTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGC‑AAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑CCC‑CCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGAGCTA  >  NC_007793/2000885‑2001073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`