Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 593,859 Δ1 bp coding (27/472 nt) SAUSA300_RS02840 → 30S ribosomal protein S7

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_007793593,8590T.99.8% 16676.3 / 18.9 4211coding (27/472 nt)SAUSA300_RS0284030S ribosomal protein S7
Reads supporting (aligned to +/- strand):  ref base T (7/0);  major base . (4147/43);  minor base C (10/0);  total (4168/43)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 4214 total aligned reads displayed.

CTAAGAATTTAGTTTTTAATTAAATCTTAAACTTAAAATATTTAATATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAATAAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGCACAA  >  NC_007793/593764‑593953
                                                                                               |                                                                                              
          aGTTTTTAATTAAATCTTAAACTTAAAATATTTAATATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTAcc                                                                                 <  1:6004378/100‑1 (MQ=255)
                           tagacttaaaATATTTAATATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAAct                                                                >  1:2317725/4‑100 (MQ=255)
                           taaacttaaactATTTAATATAAGGAAGGGAGGATTTACATTATGCCTCGTATAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAAct                                                                >  1:2579357/1‑100 (MQ=255)
                           taaacttaaaATATTTAATATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAAct                                                                >  1:4712931/1‑100 (MQ=255)
                           taaacttaaaATATTTAATATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAAct                                                                >  1:298158/1‑100 (MQ=255)
                                        gttAATATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAAc                                                   >  1:2050621/2‑100 (MQ=255)
                                          tAATATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTa                                                 >  1:6267164/1‑100 (MQ=255)
                                           aaTATAAGGAAGGGAGGATTTACATTATGCCTCGTACAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTaa                                                >  1:3744856/1‑100 (MQ=255)
                                           aaTATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTaa                                                >  1:6513873/1‑100 (MQ=255)
                                            atatAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTaaa                                               >  1:1000587/1‑100 (MQ=255)
                                              ttaAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCCGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAATTAGTAACTAaatt                                             >  1:4830644/2‑100 (MQ=255)
                                              ctaAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAATTTAGTAACTAaatt                                             >  1:82817/2‑100 (MQ=255)
                                              ataAGGAAGGGTGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaatt                                             >  1:6379324/1‑100 (MQ=255)
                                              ataAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaatt                                             >  1:3145989/1‑100 (MQ=255)
                                              ataAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaatt                                             >  1:3028970/1‑100 (MQ=255)
                                              ataAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaatt                                             >  1:2244071/1‑100 (MQ=255)
                                               taAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaatta                                            >  1:1695717/1‑100 (MQ=255)
                                               taAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaatta                                            >  1:5890685/1‑100 (MQ=255)
                                               caaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaatta                                            >  1:932742/2‑100 (MQ=255)
                                                aaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                           >  1:5716127/1‑100 (MQ=255)
                                                aaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                           >  1:3087757/1‑100 (MQ=255)
                                                aaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                           >  1:3470383/1‑100 (MQ=255)
                                                aaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                           >  1:357712/1‑100 (MQ=255)
                                                aaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                           >  1:5510037/1‑100 (MQ=255)
                                                aaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                           >  1:4612858/1‑100 (MQ=255)
                                                aaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                           >  1:1150144/1‑100 (MQ=255)
                                                aaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                           >  1:2180804/1‑100 (MQ=255)
                                                aaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                           >  1:1212011/1‑100 (MQ=255)
                                                 ctctaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAGTTCATAACTCTAAGTTAGTAACTAaattaat                                          >  1:6327623/5‑100 (MQ=255)
                                                 aggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaat                                          >  1:6073780/1‑100 (MQ=255)
                                                   gaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAattaatta                                        >  1:5620744/1‑100 (MQ=255)
                                                   caaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAattaatta                                        >  1:567607/2‑100 (MQ=255)
                                                    aaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTACGTTAGTAACTAAAttaattaa                                       >  1:6572443/1‑100 (MQ=255)
                                                    aaggGAGGATTTACATTACGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAAttaattaa                                       >  1:3417808/1‑100 (MQ=255)
                                                             tttACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATTCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTAt                              >  1:620166/1‑100 (MQ=255)
                                                              ttACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATg                             >  1:5441020/1‑100 (MQ=255)
                                                                aCATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGtt                           >  1:704049/1‑100 (MQ=255)
                                                                  tctATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAg                         >  1:4303060/3‑100 (MQ=255)
                                                                   ttATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAgg                        >  1:391614/1‑99 (MQ=255)
                                                                   ttATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGa                        >  1:3525908/1‑100 (MQ=255)
                                                                   ttATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGa                        >  1:1268712/1‑100 (MQ=255)
                                                                   gtATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGa                        >  1:4994921/2‑100 (MQ=255)
                                                                   gcttGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGa                        >  1:5175458/4‑100 (MQ=255)
                                                                   atATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTACGTTAGTAACTAAATTAATTAACAAAATTATGTTAGa                        >  1:3357339/2‑100 (MQ=255)
                                                                   atATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGa                        >  1:1446815/2‑100 (MQ=255)
                                                                    tATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGac                       >  1:5378815/1‑99 (MQ=255)
                                                                    tATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGAt                       >  1:1325353/1‑100 (MQ=255)
                                                                    tATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGAt                       >  1:3693412/1‑100 (MQ=255)
                                                                    tATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGAt                       >  1:1766502/1‑100 (MQ=255)
                                                                    tATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGAt                       >  1:2112817/1‑100 (MQ=255)
                                                                    tATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGAt                       >  1:528526/1‑100 (MQ=255)
                                                                    tATGCCTAGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGAt                       >  1:883283/1‑100 (MQ=255)
                                                                    cctGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATACAATTCATAACTCCAAGTTAGTAACTAAATTAATTAACACAATTATGTTAGAt                       >  1:398458/3‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGGGACGTATTACCAGATCCAATTCATAACTCTAAGCTAGTAACTGAATTAATTAACAAAATTATGTTAGATg                      >  1:283425/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTTAGTTAGTTACTAAATTAATTAACAAAATTATGTGAGATg                      >  1:4659295/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGGTg                      >  1:6440329/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                      >  1:5946553/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                      >  1:1070801/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                      >  1:1518534/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                      >  1:2454814/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                      >  1:2510702/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                      >  1:3195548/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                      >  1:3238551/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                      >  1:364501/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                      >  1:3807437/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAAATg                      >  1:1386904/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAAATg                      >  1:5335625/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTACGTTAGaga                      >  1:2402335/1‑98 (MQ=255)
                                                                      tGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATgg                     >  1:4088802/1‑100 (MQ=255)
                                                                      tGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATATTAGATgg                     >  1:510713/1‑100 (MQ=255)
                                                                      cgCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATgg                     >  1:1930373/2‑100 (MQ=255)
                                                                      agCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATgt                     >  1:4560739/2‑99 (MQ=255)
                                                                       gCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCGGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGAtagg                    >  1:1573435/1‑97 (MQ=255)
                                                                       gCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGt                    >  1:2776762/1‑100 (MQ=255)
                                                                       gCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGACGGt                    >  1:2712356/1‑100 (MQ=255)
                                                                           cGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAAc                >  1:330359/1‑100 (MQ=255)
                                                                           cGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAAc                >  1:4764669/1‑100 (MQ=255)
                                                                           cGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAAc                >  1:5832728/1‑100 (MQ=255)
                                                                             caaaGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGGTGGTaagatc              >  1:768480/2‑96 (MQ=255)
                                                                              aaaGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATAGTtaagatc             >  1:5230728/1‑96 (MQ=255)
                                                                                  cctCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAAc         >  1:4890997/3‑100 (MQ=255)
                                                                                    tCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAg       >  1:4244868/1‑100 (MQ=255)
                                                                                     ctgTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGc      >  1:2647893/3‑100 (MQ=255)
                                                                                     cAGTACCTAA‑AAGAGACGTATTACCAGATCCCATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGc      >  1:4953162/1‑100 (MQ=255)
                                                                                     cAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAAcagatcggaag      >  1:4499771/1‑90 (MQ=255)
                                                                                     cAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGc      >  1:6631261/1‑100 (MQ=255)
                                                                                     cAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGc      >  1:4420237/1‑100 (MQ=255)
                                                                                     cAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGc      >  1:4350996/1‑100 (MQ=255)
                                                                                     cAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGc      >  1:28987/1‑100 (MQ=255)
                                                                                     cAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGc      >  1:5781678/1‑100 (MQ=255)
                                                                                     cAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGc      >  1:5569692/1‑100 (MQ=255)
                                                                                     cAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGc      >  1:3859148/1‑100 (MQ=255)
                                                                                     cAGTACCTAA‑AAGAGACGTACTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGc      >  1:4033455/1‑100 (MQ=255)
                                                                                      tgTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACCAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGca     >  1:1881447/2‑100 (MQ=255)
                                                                                      aGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGca     >  1:5051950/1‑100 (MQ=255)
                                                                                       gTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACGAAATTATGTTAGATGGTAAACGTGGAACAGcac    >  1:6136855/1‑100 (MQ=255)
                                                                                       gTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGcac    >  1:4151934/1‑100 (MQ=255)
                                                                                         aCCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGCACaa  >  1:1640479/1‑100 (MQ=255)
                                                                                         aCCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGCACaa  >  1:1825605/1‑100 (MQ=255)
                                                                                         aCCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGCACaa  >  1:1990369/1‑100 (MQ=255)
                                                                                               |                                                                                              
CTAAGAATTTAGTTTTTAATTAAATCTTAAACTTAAAATATTTAATATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAATAAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGCACAA  >  NC_007793/593764‑593953

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑