Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,887,849	(T)7→6	coding (1165/1182 nt)	SAUSA300_RS09310 ←	multidrug MFS transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,887,843	0	T	.	100.0%	80.6 / NA	22	coding (1171/1182 nt)	SAUSA300_RS09310	multidrug MFS transporter
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (1/21);  total (1/21)

GCTCCAAACGAAATTAAATTATACAAATTAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTATTTTTTTAGGTTGCGTATTATTCTCCTTGAAAACCATTAATAATATTAATGCAAATACAAGTAGTAGCATCATACCGATAAACATCATG  >  NC_007793/1887746‑1887931                                                                                                  |                                                                                         gCTCCGAACGAAATTAAATTATACAAATTAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTAttt                                                                                        >  1:262016/1‑100 (MQ=255)    ccAAACGAAATTAAATTATACAAATTAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTAtttttt                                                                                     <  1:3434718/100‑1 (MQ=255)    ccAAACGAAATTAAATTATACAAATTAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTAtttttt                                                                                     <  1:65917/100‑1 (MQ=255)    ccAAACGAAATTAAATTATACAAATTAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTAtttttt                                                                                     <  1:5997623/100‑1 (MQ=255)        aCGAAATTAAATTATACAAATTAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTAttttttaggt                                                                                 <  1:2297976/100‑5 (MQ=255)         cGAAATTAAATTATACAAATTAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGtt                                                                               <  1:868620/100‑1 (MQ=255)          gAAATTAAATTATACAAATTAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTg                                                                              <  1:1665533/100‑1 (MQ=255)             attaaattaTACAAATTAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGGGt                                                                           <  1:220228/100‑1 (MQ=255)             attaaattaTACAAATTAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGt                                                                           <  1:298597/100‑1 (MQ=255)                    tataCAAATTAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGTATTATtc                                                                    <  1:434054/100‑1 (MQ=255)                          aaTTAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGTATTATTCTCCtgt                                                              <  1:6423434/100‑3 (MQ=255)                          aaTTAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGTATTATTCTCCTTg                                                              <  1:4603523/100‑1 (MQ=255)                          aaTTAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGTATTATTCTCCTTg                                                              <  1:3271885/100‑1 (MQ=255)                           aTTAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGTATTATTCTCCTTgg                                                             <  1:3908017/100‑2 (MQ=255)                            ttAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGTATTATTCTCCTTGaa                                                            <  1:5046910/100‑1 (MQ=255)                                   tatGTTATAACGACATTTATTTCAAGTCTATAACGTTAGTTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGTATTATTCTCCTTGAAAACCaag                                                     <  1:1469672/100‑3 (MQ=255)                                   tatGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGTATTATTCTCCTTGAAAACCAtt                                                     <  1:3018446/100‑1 (MQ=255)                                   tatGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGTATTATTCTCCTTGAAAACCAtt                                                     <  1:2519121/100‑1 (MQ=255)                                   tatGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGTATTATTCTCCTTGAAAACCAtg                                                     <  1:1451980/100‑2 (MQ=255)                                       ttATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGTATTATTCTCCTTGAAAACCATtaata                                                 <  1:3428883/100‑1 (MQ=255)                                                       ttCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGTATTATACTCCTTGAAAACCATTAATAATATTAATGCAAATAc                                 <  1:3413526/100‑1 (MQ=255)                                                              cTATAACGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGTATTATTCTCCTTGAAAACCATTAATAATATTAATGCAAATACAagtagt                          <  1:6033886/100‑1 (MQ=255)                                                                  aaCGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGTATTATTCTCCTTGAAAACCATTAATAATATTAATGCAAATACAAGTAGTAGct                      <  1:4652283/100‑2 (MQ=255)                                                                   aCGTTAATTCTATTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGTATTATTCTCCTTGAAAACCATTAATAATATTAATGCAAATACAAGTAGTAGcct                     <  1:936299/100‑3 (MQ=255)                                                                              aTTTACTCATTATGCATCTA‑TTTTTTAGGTTGCGTATTATTCTCCTTGAAAACCATTAATAATATTAATGCAAATACAAGTAGTAGCATCATACCGATaa          >  1:5136713/1‑100 (MQ=255)                                                                                     cATTATGCATCTA‑TTTTTTAGGTTGCGTATTATTCTCCTTGAAAACCATTAATAATATTAATGCAAATACAAGTAGTAGCATCATACCGATAAAcatcat   <  1:1351694/100‑1 (MQ=255)                                                                                      aTTATGCATCTA‑TTTTTTAGGTTGCGTATTATTCTCCTTGAAAACCATTAATAATATTAATGCAAATACAAGTAGTAGCATCATACCGATAAAcatcagc  <  1:2533573/100‑3 (MQ=255)                                                                                                  |                                                                                         GCTCCAAACGAAATTAAATTATACAAATTAATATTATGTTATAACGACATTTATTTCAAGTCTATAACGTTAATTCTATTTACTCATTATGCATCTATTTTTTTAGGTTGCGTATTATTCTCCTTGAAAACCATTAATAATATTAATGCAAATACAAGTAGTAGCATCATACCGATAAACATCATG  >  NC_007793/1887746‑1887931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑