| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 243,830 | (T)8→7 | coding (346/774 nt) | SAUSA300_RS01080 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 243,823 | 0 | T | . | 100.0% | 45.5 / NA | 13 | coding (353/774 nt) | SAUSA300_RS01080 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (2/11); total (2/11) | |||||||||||
CAGCGCGGGATCTTTTACGTCTTTTGTGAAAACGATTTTATTATTAACTACTTTTACTGGATAACTTTTGTATGTCGAGTCAGTAGCATTTTTTTTATCGTTTGTAGTTGTGTCATATTCACCAGTTATTTTATGTGTGTTCTTATCTACCTTTAACAACATACGGTCTTCTTTTAAAAGC > NC_007793/243735‑243915 | acgcgcGGGATCTTTTACGTCTTTTGTGAAAACGATTTTATTATTAACTACTTTTACTGGATAACTTTTGTATGTCGAGTCAGTAGCA‑TTTTTTTATCGt > 1:478708/3‑100 (MQ=255) ttttACGTCTTTTGTGAAAACGATTTTATTATTAACTACTTTTACTGGATAACTTTTGTATGTCGAGTCAGTAGCA‑TTTTTTTATCGTTTGTAGTtgtgc < 1:3579912/100‑2 (MQ=255) tgcGTCTTTTGTGAAAACGATTTTATTATTAACTACTTTTACTGGATAACTTTTGTATGTCGAGTCAGTAGCA‑TTTTTTTATCGTTTGTAGTTGTGTCat < 1:4553309/98‑1 (MQ=255) tACGTCTTTTGTGAAAACGATTTTATTATTAACTGCTTTTACTGGATAACTTTTGTATGTCGAGTCAGTAGCA‑TTTTTTTATCGTTTGTAGTTGTGTCat < 1:3200227/100‑1 (MQ=255) tACGTCTTTTGTGAAAACGATTTTATTATTAACTACTTTTACTGGATAACTTTTGTATGTCGAGTCAGTAGCA‑TTTTTTTATCGTTTGTAGTTGTGTCat < 1:1211083/100‑1 (MQ=255) tgAAAACGATTTTATTATTAACTACTTTTACTGGATAACTTTTGTATGTCGAGTCAGTAGCA‑TTTTTTTATCGTTTGTAGTTGTGTCATATTCACCAGtt < 1:3431056/100‑1 (MQ=255) tgAAAACGATTTTATTATTAACTACTTTTACTGGATAACTTTTGTATGTCGAGTCAGTAGCA‑TTTTTTTATCGTTTGTAGTTGTGTCATATTCACCAGtt < 1:4511681/100‑1 (MQ=255) tgAAAACGATTTTATTATTAACTACTTTTACTGGATAACTTTTGTATGTCGAGTCAGTAGCA‑TTTTTTTATCGTTTGTAGTTGTGTCATATTCACCAGtt < 1:5712277/100‑1 (MQ=255) gAAAACGATTTTATTATTAACTACTTTTACTGGATAACTTTTGTATGTCGAGTCAGTAGCA‑TTTTTTTATCGTTTGTAGTTGTGTCATATTCACCAGTTa < 1:3117385/100‑1 (MQ=255) ttattattaACTACTTTTACTGGATAACTTTTGTATGTCGAGTCAGTAGCA‑TTTTTTTATCGTTTGTAGTTGTGTCATATTCACCAGTTATTTTAtgtgt < 1:840498/100‑1 (MQ=255) attattaACTACTTTTACTGGATAACTTTTGTATGTCGAGTCAGTAGCA‑TTTTTTTATCGTTTGTAGTTGTGTCATATTCACCAGTTATTTTATgtgtgt < 1:973878/100‑1 (MQ=255) ttattaACTACTTTTACTGGATAACTTTTGTATGTCGAGTCAGTAGCA‑TTTTTTTATCGTTTGTAGTTGTGTCATATTCACCAGTTATTTTAtgtgagga < 1:6478194/100‑5 (MQ=255) cAGTAGCA‑TTTTTTTATCGTTTGTAGTTGTGTCATATTCACCAGTTATTTTATGTGTGTTCTTATCTACCTTCAACAACATACGGTCTTCTTTTAAAAGc > 1:1795482/1‑100 (MQ=255) | CAGCGCGGGATCTTTTACGTCTTTTGTGAAAACGATTTTATTATTAACTACTTTTACTGGATAACTTTTGTATGTCGAGTCAGTAGCATTTTTTTTATCGTTTGTAGTTGTGTCATATTCACCAGTTATTTTATGTGTGTTCTTATCTACCTTTAACAACATACGGTCTTCTTTTAAAAGC > NC_007793/243735‑243915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |