| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 218,784 | (G)6→5 | intergenic (‑265/+11) | SAUSA300_RS00985 ← / ← SAUSA300_RS00990 | branched‑chain amino acid transporter II carrier protein/isochorismatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 218,779 | 0 | G | . | 100.0% | 41.1 / NA | 12 | intergenic (‑260/+16) | SAUSA300_RS00985/SAUSA300_RS00990 | branched‑chain amino acid transporter II carrier protein/isochorismatase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (1/11); total (1/11) | |||||||||||
ATTTAACAGATATAGAATATGTTAAATATAGAAGGTTAGACAACCCGACGTATTAATACTTTGTGAAATAAAGATCCCCCTCAACATGATCGAAGGGGGGAAGTATATGTTTAGTTCAATATATTTAGAAAGTCGTTTGTAGTTATTGTTTGTCCCATCAATGGGAATACATTATCTATTGGAAATTG > NC_007793/218685‑218872 | aTTTAACAGATATAGAATATGTTAAATATAGAAGGTTAGACAACCCGACGTATTAATACTTTGTGAAATAAAGATCCCCCTCAACATGATCGAAggggga < 1:5405696/100‑2 (MQ=255) ataGAATATGTTAAATATAGAAGGTTAGACAACCCGACGTATTAATGCTTTGTGAAATAAAGATCCCCCTCAACATGATCGAA‑GGGGGAAGTATATGttt < 1:173799/100‑1 (MQ=255) ataGAATATGTTAAATATAGAAGGTTAGACAACCCGACGTATTAATACTTTGTGAAATAAAGATCCCCCTCAACATGATCGAA‑GGGGGAAGTATATGttt < 1:2826199/100‑1 (MQ=255) ataGAATATGTTAAATAGAGAAGGTTAGACAACCCGACGTATTAATACTTTGTGAAATAAAGATCCCCCTCAACATGATCGAA‑GGGGGAAGTATATGttt < 1:4167203/100‑1 (MQ=255) taGAATATGTTAAATATAGAAGGTTAGACAACCCGACGTATTAATACTTTGTGAAATAAAGATCCCCCTCAACATGATCGAA‑GGGGGAAGTATATGTTTa < 1:2473700/100‑1 (MQ=255) aTTAATACTTTGTGAAATAAAGATCCCCCTCAACATGATCGAA‑GGGGGAAGTATATGTTTAGTTCAATATATTTAGAAAGTCGTTTGTAGTTAttgtttg < 1:2876185/100‑1 (MQ=255) aCTTTGTGAAATAAAGATCCCCCTCAACATGATCGAA‑GGGGGAAGTATATGTTTAGTTCAATATATTTAGAAAGTCGTTTGTAGTTATTGTTTGTCCCAt < 1:4852125/100‑1 (MQ=255) gtgAAATAAAGATCCCCCTCAACATGATCGAA‑GGGGGAAGTATATGTTTAGTTCAATATATTTAGAAAGTCGTTTGTAGTTATTGTTTGTCCCATCAATg < 1:2263149/100‑1 (MQ=255) tgAAATAAAGATCCCCCTCAACATGATCGAA‑GGGGGAAGTATATGTTTAGTTCAATATATTTAGAAAGTCGTTTGTAGTTATTGTTTGTCCCATCAATgg < 1:4616777/100‑1 (MQ=255) gAAATAAAGATCCCCCTCAACATGATCGAA‑GGGGGAAGTATATGTTTAGTTCAATATATTTAGAAAGTCGTTTGTAGTTATTGTTTGTCCCATCAATggg < 1:3355795/100‑1 (MQ=255) aaTAAAGATCCCCCTCAACATGATCGAA‑GGGGGAAGTATATGTTTAGTTCAATATATTTAGAAAGTCGTTTGTAGTTATTGTTTGTCCCATCAATGGGaa < 1:4615119/100‑1 (MQ=255) cAACATGATCGAA‑GGGGGAAGTATATGTTTAGTTCAATATATTTAGAAAGTCGTTTGTAGTTATTGTTTGTCCCATCAATGGGAATACATTATCTATTgg > 1:4225263/1‑100 (MQ=255) gATCGAA‑GGGGGAAGTATATGTTTAGTTCAATATATTTAGAAAGTCGTTTGTAGTTATTGTTTGTCCCATCAATGGGAATACATTATCTATTGGAAATTg < 1:4994993/100‑1 (MQ=255) | ATTTAACAGATATAGAATATGTTAAATATAGAAGGTTAGACAACCCGACGTATTAATACTTTGTGAAATAAAGATCCCCCTCAACATGATCGAAGGGGGGAAGTATATGTTTAGTTCAATATATTTAGAAAGTCGTTTGTAGTTATTGTTTGTCCCATCAATGGGAATACATTATCTATTGGAAATTG > NC_007793/218685‑218872 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |