Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	838,047	(T)7→6	intergenic (+45/+271)	SAUSA300_RS04050 → / ← SAUSA300_RS04055	sporulation regulator WhiA/tRNA‑Arg

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	838,041	0	T	.	100.0%	13.4 / NA	5	intergenic (+39/+277)	SAUSA300_RS04050/SAUSA300_RS04055	sporulation regulator WhiA/tRNA‑Arg
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (5/0);  total (5/0)

ACTGAATGATTTAGCCGATAAGATTAGAAATGGTGAACAAATAGAATTATAAGTAAGAAGGTGTTTTTGGTAGTGAATTATCAAAAACACTTTTTTTATGATTAAAAAGTGTTTAATGAATAATAGTCGACTAACTATTAAATTGAGCTGG  >  NC_007793/837951‑838101                                                                                           |                                                             aCTGAATGATTTAGCCGATAAGACTAGAAATGGTGAACAAATAGAATTATAAGTAAGAAGGTGTTTTTGGTAGTGAATTATCAAAAACACttttttatga                                                     >  1:5637353/1‑96 (MQ=255)                        ttAGAAATGGTGAACAAATAGAATTATAAGTAAGAAGGTGTTTTTGGTAGTGAATTATCAAAAACAC‑TTTTTTATGATTAAAAAGTGTTTAATGaataat                             >  1:4346192/1‑100 (MQ=255)                                  tGAACAAATAGAATTATAAGTAAGAAGGTGTTTTTGGTAGTGAATTATCAAAAACAC‑TTTTTTATGATTAAAAAGTGTTTAATGAATAATAGTCGactaa                   >  1:841277/1‑100 (MQ=255)                                   gAACAAATAGAATTATAAGTAAGAAGGTGTTTTTGGTAGTGAATTATCAAAAACAC‑TTTTTTATGATTAAAAAGTGTTTAATGAATAATAGTCGactaac                  >  1:4643438/1‑100 (MQ=255)                                   gAACAAATAGAATTATAAGTAAGAAGGTGTTTTTGGTAGTGAATTATCAAAAACAC‑TTTTTTATGATTAAAAAGTGTTTAATGAATAATAGTCGactaac                  >  1:5637719/1‑100 (MQ=255)                                                   cagtaagAAGGTGTTTTTGGTAGTGAATTATCAAAAACAC‑TTTTTTATGATTAAAAAGTGTTTAATGAATAATAGTCGACTAACTATTAAATTGAGCTgg  >  1:1254532/2‑100 (MQ=255)                                                                                           |                                                             ACTGAATGATTTAGCCGATAAGATTAGAAATGGTGAACAAATAGAATTATAAGTAAGAAGGTGTTTTTGGTAGTGAATTATCAAAAACACTTTTTTTATGATTAAAAAGTGTTTAATGAATAATAGTCGACTAACTATTAAATTGAGCTGG  >  NC_007793/837951‑838101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑