D22 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007790	849	A→G	K190K (AAA→AAG)	SAUSA300_RS14705 →	replication protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007790	849	0	A	G	100.0%	1651.5 / NA	601	K190K (AAA→AAG)	SAUSA300_RS14705	replication protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (571/30); total (571/30)

Only 100 of 607 total aligned reads displayed.

ACTGATGATGATGAAAAAAATCAAGAAATTGTAAGTGATTTAGAAAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTGCTTAAACAAAAACATAAAATTTTAAACTTAGACGATGTCGAAGATGGTAATTTGATTAATGCAAGTGATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTC  >  NC_007790/751‑944

ccTGATGACGACGAAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCa                                                                                               >  1:1061732/2‑100 (MQ=25)

 cTGATGACGACGAAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCAt                                                                                              >  1:3564044/1‑100 (MQ=25)

  tgatgacgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATa                                                                                             >  1:642544/1‑100 (MQ=25)

  cgatgacgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATa                                                                                             >  1:5037094/2‑100 (MQ=21)

  agcacacgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATa                                                                                             >  1:4206172/11‑100 (MQ=21)

   gatgacgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAGAGAAAAGCATaa                                                                                            >  1:3813342/1‑100 (MQ=21)

   gatgacgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATaa                                                                                            >  1:3172333/1‑100 (MQ=21)

   gatgacgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATaa                                                                                            >  1:4812568/1‑100 (MQ=21)

   gatgacgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATaa                                                                                            >  1:4427592/1‑100 (MQ=21)

   gatgacgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATaa                                                                                            >  1:3601228/1‑100 (MQ=21)

   gatgacgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATaa                                                                                            >  1:2756570/1‑100 (MQ=21)

   gatgacgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATaa                                                                                            >  1:2679569/1‑100 (MQ=21)

   gatgacgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATaa                                                                                            >  1:121863/1‑100 (MQ=21)

   gatgacgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATaa                                                                                            >  1:1435661/1‑100 (MQ=21)

    atgacgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATaaa                                                                                           >  1:836444/1‑100 (MQ=21)

     tgacgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATaaaa                                                                                          >  1:1304543/1‑100 (MQ=21)

     cgactacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATaaaa                                                                                          >  1:5187845/8‑100 (MQ=21)

      gacgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAAt                                                                                         >  1:2106151/7‑100 (MQ=21)

       ccgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTGTGGTGGATTACTTAAAGAAAAGCATAAAAtt                                                                                        >  1:5163696/6‑100 (MQ=21)

        cgacgaAAAAAATCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAAttt                                                                                       >  1:1717327/5‑100 (MQ=21)

        cgacgaAAAAAATCAAGAAATTTTAAGTGATCT‑GGAAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAAttt                                                                                       >  1:4970861/5‑100 (MQ=18)

               aaaaaTCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTGAACtt                                                                                <  1:2631061/100‑1 (MQ=25)

                   aTCAAGAAATTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGAc                                                                            >  1:3281807/1‑100 (MQ=21)

                     cAAGAAATTATCAGTGATCTAGAAAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTAGATTGCTTAAACAAAAGCATAAAATTTTAAATTTAGata                                                                           >  1:3431214/1‑98 (MQ=25)

                           aTTTTAAGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATgcgga                                                                    <  1:3019208/100‑5 (MQ=21)

                                caGTGATCTAGAAAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTAGATTGCTTAAACAAAAGCATAAAATTTTAAATTTAGATAATGTTGAAGAt                                                                >  1:4120599/2‑100 (MQ=21)

                                aaGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATg                                                               >  1:4847987/1‑100 (MQ=21)

                                aaGTGATCTAG‑AAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATg                                                               >  1:1763162/1‑100 (MQ=21)

                                     gatctagaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTaa                                                           >  1:3725715/8‑100 (MQ=25)

                                     gatctagaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTaa                                                           >  1:500445/8‑100 (MQ=21)

                                      cctAGAAAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTAGATTGCTTAAACAAAAGCATAAAATTTTAAATTTAGATAATGTTGAAGATGGTAAt                                                          >  1:2230465/3‑100 (MQ=21)

                                         aGAAAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTAGATTGCTTAAACAAAAGCATAAAATTTTAAATTTAGATAATGTTGAAGAtcggaagaca                                                       >  1:3270673/1‑91 (MQ=21)

                                         aGAAAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTAGATTGCTTAAACAAAAGCATAAAATTTTAAATTTAGATAATGTTGAAGATGGTAAttta                                                       >  1:1353266/1‑99 (MQ=25)

                                         aGAAAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTAGATTGCTTAAACAAAAGCATAAAATTTTAAATTTAGATAATGTTGAAGATGGTAAttta                                                       >  1:4596302/1‑99 (MQ=25)

                                          agagaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:4385431/5‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGGAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:4499830/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:1020133/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:1673173/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:4915432/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:3758240/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:489098/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:3910360/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:1104818/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:3943607/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:4668893/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:4630323/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:924673/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:4241407/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:4257461/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:4312660/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:4551604/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:447106/3‑100 (MQ=37)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:2556957/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:1490056/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:2718840/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:2848909/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:158847/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:707471/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:2588590/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:3071391/3‑100 (MQ=37)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:2486377/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:2399412/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:3357916/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:2336708/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:187343/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:879430/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:1654408/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATACCGAAGATGGTAATTTGa                                                      >  1:4186375/3‑100 (MQ=25)

                                          agaaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGGGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGa                                                      >  1:352869/3‑100 (MQ=25)

                                            aaaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGAtt                                                    >  1:3674312/1‑100 (MQ=37)

                                             taaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTa                                                   >  1:2026809/2‑100 (MQ=25)

                                             aaaGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTa                                                   <  1:5240776/100‑1 (MQ=25)

                                                 ccttGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAAtac                                               >  1:4290782/3‑98 (MQ=37)

                                                  tttGTATCGAAAACGTATGTTAAGTTATGGTAGATTGCTTAAACAAAAGCATAAAATTTTAAATTTAGATAATGTTGAAGATGGTAATTTAATTAATACa                                              <  1:2879732/100‑1 (MQ=25)

                                                   ttGTATCGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACag                                             <  1:596133/100‑2 (MQ=37)

                                                         cGAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAgaagat                                       >  1:3104149/1‑95 (MQ=37)

                                                          gAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGtgatga                                      <  1:2919597/100‑1 (MQ=37)

                                                          gAAAACGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATCTGATTAATACAAGtgatga                                      <  1:2284097/100‑1 (MQ=37)

                                                          acccccGTATGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGtgatga                                      >  1:2796479/6‑100 (MQ=255)

                                                           aaaaCGTATGTTAAGTTATGGTAGATTGCTTAAACAAAAGCATAAAATTTTAAATTTAGATAATGTTGAAGATGGTAATTTAATTAATACAAGTGACGaa                                     >  1:78698/1‑100 (MQ=255)

                                                               cGTATGTTAAGTTATGGTAGATTGCTTAAACAAAAGCATAAAATTTTAAATTTAGATAATGTTGAAGATGGTAATTTAATTAATACAAGTGACGAAGATa                                 >  1:5095775/1‑100 (MQ=255)

                                                                  aTGTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATaaga                              >  1:3399164/1‑98 (MQ=255)

                                                                   tatgtggtaaTGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAaac                             >  1:1797639/10‑100 (MQ=255)

                                                                    gTTAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAaaca                            >  1:1390916/1‑100 (MQ=255)

                                                                      tAAGTTATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAgacgac                          <  1:949061/100‑1 (MQ=255)

                                                                           tctggtggATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAATACGACAGatc                     >  1:4351662/3‑98 (MQ=255)

                                                                           tATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAGATGACAGatc                     >  1:1268927/1‑98 (MQ=255)

                                                                           tATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAACACGACAGatc                     >  1:1828131/1‑98 (MQ=255)

                                                                           tATGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAACGAGAGACg                     >  1:2191025/1‑100 (MQ=255)

                                                                           gaTGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAACGACAGACg                     >  1:3224719/2‑100 (MQ=255)

                                                                            aTGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGTTGGTAATTTGATTAATACAAGTGATGAAGATAAAGCGACAGatcg                    >  1:808183/1‑97 (MQ=255)

                                                                            aTGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAATACGACAGatcg                    >  1:195568/1‑97 (MQ=255)

                                                                            aTGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAGACGACAGatcg                    >  1:4737057/1‑97 (MQ=255)

                                                                            aTGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAACGACAgccca                    >  1:3295375/1‑96 (MQ=255)

                                                                            aTGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAACGACAGACga                    >  1:4058479/1‑100 (MQ=255)

                                                                            aTGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAACGACAGACga                    >  1:573722/1‑100 (MQ=255)

                                                                            aTGGTGGATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAACAACAGatcg                    >  1:3471113/1‑97 (MQ=255)

                                                                             tggtggATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAACGACAGACgaa                   >  1:1153999/1‑100 (MQ=255)

                                                                              ggtggATTACTTAAAGAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAGCGACAGatcgga                  >  1:3997897/1‑95 (MQ=255)

                                                                                             ctaaagCATAAAATTTTAAATTTAGATAATGTTGAAGATGGTAATTTAATTAATACAAGTGACGAAGATAAAACAACAGACGAAGAGGAAAAAGCACAtt   >  1:289152/3‑100 (MQ=255)

ACTGATGATGATGAAAAAAATCAAGAAATTGTAAGTGATTTAGAAAAAGGTTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTGCTTAAACAAAAACATAAAATTTTAAACTTAGACGATGTCGAAGATGGTAATTTGATTAATGCAAGTGATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTC  >  NC_007790/751‑944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`