Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007790	378	509	132	27 [2]	[9] 11	SAUSA300_RS14705	replication protein

TTGTTGGATTTATGCGTTCAACAGAAGTTACCGTTAATAAAAATGACGGTAGTTATAATCAGCACATGCATGTTTTGTTATGTGTTGAAAATGCATATTTTAGAAAAAAAGAGAATTATATAACTCAAGAAGAATGGGTTAATTTA  >  NC_007790/467‑612                                            |                                                                                                       taattgGCTTTATGCATTCAACTGAAGTAACAGTTAATAAAAATGACGGTAGTTATAATCAACATATGCACGTTTTGTTGTGTGTTGAAAATGCGTAttg                                                <  1:2669878/97‑2 (MQ=255)  atctgGCTTTATGCATTCAACTGAAGTAACAGTTAATAAAAATGACGGTAGTTATAATCAACATATGCACGTTTTGTTGTGTGTTGAAAATGCGTAtttt                                               >  1:117719/4‑100 (MQ=255)   attgGCTTTATGCATTCAACTGAAGTAACAGTTAATAAAAATGACGGTAGTTATAATCAACATATGCACGTTTTGTTGTGTGTTGAAAATGCGTATTTTa                                              >  1:3714068/2‑100 (MQ=255)     tgGCTTTATGCATTCAACTGAAGTAACAGTTAATAAATATGACGGTAGTTATAATCAACATATGCACGTTTTGTTGTGTGTTGAAAATGCGTATTTTAGa                                            >  1:2329207/1‑100 (MQ=255)     tgGCTTTATGCATTCAACTGAAGTAACAGTTAATAAAAATGACGGTAGTTATAATCAACATATGCACGTTTTGTTGTGTGTTGAAAATGCGTATTTTAGa                                            >  1:2796635/1‑100 (MQ=255)      ggctttATGCATTCAACTGAAGTAACAGTTAATAAAAATGACGGTAGTTATAATCAACATATGCACGTTTTGTTGTGTGTTGAAAATGCGTATTTTAGaa                                           >  1:3346175/4‑100 (MQ=255)        ctttATGCATTCAACTGAAGTAACAGTTAATAAAAATGACGGTAGTTATAATCAACATATGCACGTTTTGTTGTGTGTTGAAAATGCGTATTTTAGaaag                                         <  1:3057607/99‑2 (MQ=255)           tATGCATTCAACTGAAGTAACAGTTAATAAAAATGACGGTAGTTATAATCAACATATGCACGTTTTGTTGTGTGTTGAAAATGCGTATTTTAgaaagaaa                                      >  1:670059/1‑100 (MQ=255)                                           ctGACGGTAGTTATAATCAACATATGCACGTTTTGTTGTGTGTTGAAAATGCGTATTTTAGAAAGAAA‑‑‑AAATATATTACACAAACAGAATTGGTTGAttt   >  1:3522059/2‑100 (MQ=255)                                           aTGACGGTAGTTATAATCAACATATGCACGTTTTGTTGTGTGTTGAAAATGCGTATTTTAGAAAGAAA‑‑‑AAATATATTACACAAACAGAATTGGTTGAttt   >  1:6019266/1‑100 (MQ=255)                                            tGACGGTAGTTATAATCAACATATGCACGTTTTGTTGTGTGTTGAAAATGCGTATTTTAGAAAGAAA‑‑‑AAATATATTACACAAACAGAATTGGTTGATTTa  >  1:5942142/1‑100 (MQ=255)                                            |                                                                                                       TTGTTGGATTTATGCGTTCAACAGAAGTTACCGTTAATAAAAATGACGGTAGTTATAATCAGCACATGCATGTTTTGTTATGTGTTGAAAATGCATATTTTAGAAAAAAAGAGAATTATATAACTCAAGAAGAATGGGTTAATTTA  >  NC_007790/467‑612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑