| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 903,326 | 2 bp→GT | intergenic (+33/‑156) | SAUSA300_RS04430 → / → SAUSA300_RS04435 | Fe‑S cluster assembly protein SufB/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 903,326 | 0 | T | G | 100.0% | 44.9 / NA | 17 | intergenic (+33/‑157) | SAUSA300_RS04430/SAUSA300_RS04435 | Fe‑S cluster assembly protein SufB/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (17/0); total (17/0) | |||||||||||
| * | NC_007793 | 903,327 | 0 | C | T | 100.0% | 48.9 / NA | 17 | intergenic (+34/‑156) | SAUSA300_RS04430/SAUSA300_RS04435 | Fe‑S cluster assembly protein SufB/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (17/0); total (17/0) | |||||||||||
TACGCGGTCGAAATGAACCGTTTAATCAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATAT > NC_007793/903237‑903364 || tACGCGGTCGAAATGAACCGTTTAATCAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATTCTTAACTGTCGAAAACgg > 1:1439434/1‑100 (MQ=255)tACGCGGTCGAAATGAACCGTTTAATCAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATTCTTAACTGTCGAAAACgg > 1:5041639/1‑100 (MQ=255)tACGCGGTCGAAATGAACCGTTTAATCAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATCCTTAACTGTCGAAAACgg > 1:4588079/1‑100 (MQ=255) cgGTCGAAATGAACCGTTTAATCAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATTCTTAACTGTCGAAAACGGTTAt > 1:4975881/1‑100 (MQ=255) gAACCGTTTAATCAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATTCTTAACTGTCGAAAACGGTTATTGATACCAtt > 1:4082568/1‑100 (MQ=255) agaCCGTTTAATCAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATTCTTAACTGTCGAAAACGGTTATTGATACCAtt > 1:3174432/3‑100 (MQ=255) tgggTTTAATCAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATTCTTAACTGTCGAAAACGGTTATTGATACCAtttt > 1:3556371/4‑100 (MQ=255) tAATCAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATTCTTAACTGTCGAAAACGGTTATTGATACCATTTTGATAcc > 1:1218264/1‑99 (MQ=255) tgcAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATTCTTAACTGTCGAAAACGGTTATTGATACCATTTTGATAccat > 1:1443175/3‑97 (MQ=255) aTCAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATTCTTAACTGTCGAAAACGGTTATTGATACCATTTTGATAccat > 1:1724857/1‑97 (MQ=255) acAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATTCTTAACTGTCGAAAACGGTTATTGATACCATTTTGATAccatt > 1:399621/2‑96 (MQ=255) cAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATTCTTAACTGTCGAAAACGGTTATTGATACCATTTTGATAccattt > 1:5878064/1‑95 (MQ=255) cAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATTCTTAACTGTCGAAAACGGTTATTGATACCATTTTGATAccattt > 1:38147/1‑95 (MQ=255) cAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATTCTTAACTGTCGAAAACGGTTATTGATACCATTTTGATAccattt > 1:3761859/1‑95 (MQ=255) caGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATTCTTAACTGTCGAAAACGGTTATTGATACCATTTTGATAccattta > 1:1486312/2‑94 (MQ=255) aGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATTCTTAACTGTCGAAAACGGTTATTGATACCATTTTGATAccatttac > 1:1585063/1‑93 (MQ=255) aGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCTATTCTTAACTGTCGAAAACGGTTATTGATACCATTTTGATAccatttac > 1:5115941/1‑93 (MQ=255) || TACGCGGTCGAAATGAACCGTTTAATCAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATAT > NC_007793/903237‑903364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |