D15 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,961,241	G→C	noncoding (27/76 nt)	SAUSA300_RS09730 ←	tRNA‑Asp

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,961,241	0	G	C	99.9%	2154.3 / NA	715	noncoding (27/76 nt)	SAUSA300_RS09730	tRNA‑Asp
Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (17/697); total (17/698)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 727 total aligned reads displayed.

ATCCATTGCTCTACCAACTGAGCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACG  >  NC_007793/1961144‑1961337

aTCCATTGCTCTACCAACTGAGCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCg                                                                                                <  1:1830405/100‑1 (MQ=255)

       gCTCTACCAACTGAGCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCggcaagaa                                                                                         <  1:1486220/100‑8 (MQ=255)

            aCCAACTGAGCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTa                                                                                    <  1:4031379/100‑1 (MQ=255)

                aCTGAGCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACt                                                                                <  1:19080/100‑1 (MQ=255)

                   tccgatcTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:1000906/94‑1 (MQ=255)

                   gtgcaaCTGAACCGTAATGGTAATAGTAATGGCGGTCTCGACGGGAATCGAACCTGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:5792045/95‑1 (MQ=17)

                   gggCTATTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:3781386/98‑1 (MQ=255)

                   gggCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:4211835/98‑1 (MQ=255)

                   gcgctgctGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:3390785/98‑1 (MQ=255)

                   gagtcaCTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:1093703/95‑1 (MQ=255)

                   gAGCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:1044289/100‑1 (MQ=255)

                   gAGCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:367719/100‑1 (MQ=255)

                   gAGCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:4001715/100‑1 (MQ=255)

                   gAGCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:4466726/100‑1 (MQ=255)

                   gAGCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:4793827/100‑1 (MQ=255)

                   gAGCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:1259409/100‑1 (MQ=255)

                   gAGCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:5931336/100‑1 (MQ=255)

                   gAGCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:5878254/100‑1 (MQ=255)

                   gAGCGACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:1956953/100‑1 (MQ=255)

                   gAGCCACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:3062614/100‑1 (MQ=255)

                   gAGCAACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:5279303/100‑1 (MQ=255)

                   cggCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:256160/98‑1 (MQ=255)

                   atgCTACTGAACCGTAATGGTAATAATAATGGCGGTTTCGACGGGAACCGAACCCGCGGTCTCCTGCGGGACAGGCAGCCGTGTTAACCGCCACACTACg                                                                             >  1:5359195/3‑100 (MQ=255)

                   aggCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACg                                                                             <  1:615189/98‑1 (MQ=255)

                        aCTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGAcc                                                                        <  1:555100/100‑1 (MQ=255)

                         cTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCt                                                                       <  1:2384054/100‑1 (MQ=255)

                         cTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCt                                                                       <  1:5492971/100‑1 (MQ=255)

                         cTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCt                                                                       <  1:5088716/100‑1 (MQ=255)

                          tGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGTTCTCCTGCGTGACAGGCAGCCGCGTTAACCGCTACAATACGGGAccca                                                                      >  1:5224347/1‑98 (MQ=17)

                           gatccGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTat                                                                     <  1:1149337/97‑1 (MQ=255)

                           gAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCtga                                                                     <  1:3479998/100‑3 (MQ=255)

                           gAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTat                                                                     <  1:2152400/100‑1 (MQ=255)

                           gAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTat                                                                     >  1:2125024/1‑100 (MQ=255)

                           gAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTag                                                                     <  1:91805/100‑2 (MQ=255)

                           gAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTag                                                                     <  1:2711156/100‑2 (MQ=255)

                           gAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTaa                                                                     <  1:2082831/100‑2 (MQ=255)

                            aaCCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTatt                                                                    <  1:664437/100‑1 (MQ=255)

                             aCCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTatta                                                                   <  1:1710214/100‑1 (MQ=255)

                             aCCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTatta                                                                   <  1:263304/100‑1 (MQ=255)

                               cGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTattagg                                                                 <  1:1199752/100‑3 (MQ=255)

                                        aataataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACt                                                        <  1:497081/100‑1 (MQ=255)

                                        aataataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACGACGAGACCTATTAAATTAAAAACt                                                        >  1:2676150/1‑100 (MQ=255)

                                           aataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATg                                                     <  1:490083/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAGTCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:4875852/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAGCCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:1593861/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATgc                                                    <  1:5600852/100‑2 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:1558415/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:3243671/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:5021457/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:3192097/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:3566524/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:1853157/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:3122920/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:5422533/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:5627548/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:5698187/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:5741760/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:5165263/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:1421577/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:13621/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:5962474/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:603735/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:1309562/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:6179470/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:6222469/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:2872521/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:814164/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:847643/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:3005769/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:2919952/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:2735085/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:3831885/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:3891605/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:2511015/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:4096248/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:4162515/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:4280868/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:4326444/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:4424068/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:234141/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:4527064/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:3294458/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:4661097/100‑1 (MQ=255)

                                            ataatGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGt                                                    <  1:4736253/100‑1 (MQ=255)

                                               atGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTagg                                                 <  1:3912398/100‑3 (MQ=255)

                                                 ggCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGc                                               <  1:1663380/100‑1 (MQ=255)

                                                   cGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGCgt                                             <  1:644735/100‑2 (MQ=255)

                                                   cGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGCgg                                             <  1:3739748/100‑1 (MQ=255)

                                                     gTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGCGGGa                                           <  1:3528852/100‑1 (MQ=255)

                                                        tcGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGcagactaa                                        <  1:3619003/100‑8 (MQ=255)

                                                                   cGAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGCGGGAGGCGGATTTGAacc                             <  1:4606560/100‑1 (MQ=255)

                                                                    gAACCCGCGATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGCGGGGGGCGGATTTGAacca                            >  1:2783907/1‑100 (MQ=255)

                                                                        ttcacgcctcCTGCATGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGCGGGAGGCGGATTTGAACCACCGa                        >  1:750518/8‑100 (MQ=25)

                                                                            gATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGCGGGAGGCGGATTTGAACCACCGACCtt                    <  1:610884/100‑1 (MQ=255)

                                                                            gATCTCCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGCGGGAGGCGGATTTGAACCACCGACCta                    <  1:2412905/100‑2 (MQ=255)

                                                                              tctcCTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGCGGGAGGCGGATTTGAACCACCGACCTTCg                  <  1:5657616/100‑1 (MQ=255)

                                                                                  cTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGtt              <  1:3966449/100‑1 (MQ=255)

                                                                                  cTGCGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGtg              <  1:890774/100‑2 (MQ=255)

                                                                                     cGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATg           <  1:2248711/100‑1 (MQ=255)

                                                                                     cGTGACAGGCAGCCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATg           <  1:175581/100‑1 (MQ=255)

ATCCATTGCTCTACCAACTGAGCTACTGAACCGTAATGGTAATAATAATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATTAAATTAAAAACTATGTATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACG  >  NC_007793/1961144‑1961337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`