Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 1,533,312 A→T intergenic (‑165/+92) SAUSA300_RS07445 ← / ← SAUSA300_RS07450 30S ribosomal protein S1/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077931,533,3120AT100.0% 495.1 / NA 161intergenic (‑165/+92)SAUSA300_RS07445/SAUSA300_RS0745030S ribosomal protein S1/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (1/160);  total (1/160)

Only 100 of 162 total aligned reads displayed.

CCTCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTATGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGTCATTTCAT  >  NC_007793/1533218‑1533407
                                                                                              |                                                                                               
 cTCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATc                                                                                           <  1:4866036/100‑1 (MQ=255)
 cTCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATc                                                                                           <  1:1360970/100‑1 (MQ=255)
 cTCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATc                                                                                           <  1:2376612/100‑1 (MQ=255)
 cTCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATc                                                                                           <  1:1673973/100‑1 (MQ=255)
  tCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCa                                                                                          <  1:1138554/100‑1 (MQ=255)
  tCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCa                                                                                          <  1:390556/100‑1 (MQ=255)
   cGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCaa                                                                                         <  1:5259672/100‑1 (MQ=255)
           ttttGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATAc                                                                                 <  1:597300/100‑1 (MQ=255)
           ttttGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATAc                                                                                 <  1:5678184/100‑1 (MQ=255)
           ttttGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATAc                                                                                 <  1:1597661/100‑1 (MQ=255)
                cGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGttt                                                                            <  1:1091096/100‑1 (MQ=255)
                 gAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGtttc                                                                           <  1:4943029/100‑2 (MQ=255)
                  aaaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGc                                                                          <  1:3926431/100‑1 (MQ=255)
                   aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTgag                                                                         <  1:2005438/100‑3 (MQ=255)
                   aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt                                                                         <  1:4023473/100‑1 (MQ=255)
                   aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt                                                                         <  1:4101045/100‑1 (MQ=255)
                   aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt                                                                         <  1:4368439/100‑1 (MQ=255)
                   aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt                                                                         <  1:2950538/100‑1 (MQ=255)
                   aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt                                                                         <  1:4374692/100‑1 (MQ=255)
                   aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt                                                                         <  1:4460107/100‑1 (MQ=255)
                   aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt                                                                         <  1:4658200/100‑1 (MQ=255)
                   aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt                                                                         <  1:5359994/100‑1 (MQ=255)
                   aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt                                                                         <  1:5775311/100‑1 (MQ=255)
                   aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt                                                                         <  1:5830125/100‑1 (MQ=255)
                   aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt                                                                         <  1:2298220/100‑1 (MQ=255)
                   aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt                                                                         <  1:6094454/100‑1 (MQ=255)
                   aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt                                                                         <  1:207727/100‑1 (MQ=255)
                   aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCt                                                                         <  1:3394992/100‑1 (MQ=255)
                     tAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTag                                                                       <  1:794581/100‑2 (MQ=255)
                      aGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATg                                                                      <  1:6164007/100‑1 (MQ=255)
                      aGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATCTTTGTATCAAAGTAATACAGTTTGCTATg                                                                      <  1:3537190/100‑1 (MQ=255)
                       gTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGt                                                                     <  1:5322676/100‑1 (MQ=255)
                       gTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGt                                                                     <  1:3372073/100‑1 (MQ=255)
                       gTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGt                                                                     <  1:2571209/100‑1 (MQ=255)
                         cATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGttt                                                                   <  1:467897/100‑1 (MQ=255)
                         cATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGttt                                                                   <  1:1225467/100‑1 (MQ=255)
                          atatatatAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTta                                                                  <  1:3251027/100‑1 (MQ=255)
                          atatACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGtggg                                                                  <  1:2980384/100‑4 (MQ=255)
                          atatACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTta                                                                  <  1:3871498/100‑1 (MQ=255)
                           tataCATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTtat                                                                 <  1:950007/100‑1 (MQ=255)
                            ataCATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTtagg                                                                <  1:4198670/100‑3 (MQ=255)
                             taCATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATAc                                                               <  1:4238879/100‑1 (MQ=255)
                                          cACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGtaa                                                  <  1:2428129/100‑2 (MQ=255)
                                                                        tAAATATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGtttg                    <  1:1886510/100‑2 (MQ=255)
                                                                          aaTATTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTtat                  <  1:1060958/100‑1 (MQ=255)
                                                                           atatTTATTACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTtata                 <  1:5195186/100‑1 (MQ=255)
                                                                             atttattACAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAg               <  1:3768407/100‑1 (MQ=255)
                                                                                tattaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTca            <  1:4229467/100‑2 (MQ=255)
                                                                                tattaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCt            <  1:4865154/100‑1 (MQ=255)
                                                                                tattaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCt            <  1:1488080/100‑1 (MQ=255)
                                                                                tattaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCt            <  1:4201138/100‑1 (MQ=255)
                                                                                 attaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTg           <  1:3615252/100‑1 (MQ=255)
                                                                                 attaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTg           <  1:2245757/100‑1 (MQ=255)
                                                                                 attaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTg           <  1:324412/100‑1 (MQ=255)
                                                                                 attaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTg           <  1:4890372/100‑1 (MQ=255)
                                                                                 attaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTg           <  1:53571/100‑1 (MQ=255)
                                                                                 attaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATA‑TTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGt          <  1:4003954/100‑1 (MQ=255)
                                                                                  ttaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTgg          <  1:3185337/100‑2 (MQ=255)
                                                                                  ttaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTgg          <  1:2564143/100‑2 (MQ=255)
                                                                                  ttaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTgc          <  1:3730533/100‑2 (MQ=255)
                                                                                  ttaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGt          <  1:3607460/100‑1 (MQ=255)
                                                                                  ttaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGt          <  1:1134371/100‑1 (MQ=255)
                                                                                  ttaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGt          <  1:4476782/100‑1 (MQ=255)
                                                                                  ttaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGt          <  1:3016881/100‑1 (MQ=255)
                                                                                  ttaCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGt          <  1:1783948/100‑1 (MQ=255)
                                                                                   taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTggt         <  1:2795911/100‑3 (MQ=255)
                                                                                   taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTggt         <  1:6234066/100‑3 (MQ=255)
                                                                                   taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtt         <  1:4427264/100‑2 (MQ=255)
                                                                                   taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtt         <  1:2640700/100‑2 (MQ=255)
                                                                                   taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc         <  1:5951327/100‑1 (MQ=255)
                                                                                   taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc         <  1:239406/100‑1 (MQ=255)
                                                                                   taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc         <  1:6051627/100‑1 (MQ=255)
                                                                                   taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc         <  1:2098837/100‑1 (MQ=255)
                                                                                   taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc         <  1:3055408/100‑1 (MQ=255)
                                                                                   taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc         <  1:5260732/100‑1 (MQ=255)
                                                                                   taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc         <  1:1155337/100‑1 (MQ=255)
                                                                                   taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc         <  1:695471/100‑1 (MQ=255)
                                                                                   taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc         <  1:1929444/100‑1 (MQ=255)
                                                                                   taCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc         <  1:4572181/100‑1 (MQ=255)
                                                                                   taCAACCATTTTTGTACCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc         <  1:756428/100‑1 (MQ=255)
                                                                                    aCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtca        <  1:5087134/100‑1 (MQ=255)
                                                                                    aCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtca        <  1:2523056/100‑1 (MQ=255)
                                                                                    aCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtca        <  1:2650605/100‑1 (MQ=255)
                                                                                    aCAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtca        >  1:576203/1‑100 (MQ=255)
                                                                                     cAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcat       <  1:5426438/100‑1 (MQ=255)
                                                                                     cAACCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcat       <  1:1268440/100‑1 (MQ=255)
                                                                                      aaCCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatt      <  1:6131988/100‑1 (MQ=255)
                                                                                      aaCCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatt      <  1:2753476/100‑1 (MQ=255)
                                                                                      aaCCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatt      <  1:3848107/100‑1 (MQ=255)
                                                                                      aaCCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatt      <  1:3265139/100‑1 (MQ=255)
                                                                                      aaCCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatg      <  1:5531653/100‑2 (MQ=255)
                                                                                      aaCCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatg      <  1:435213/100‑2 (MQ=255)
                                                                                       aCCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcattg     <  1:3723146/100‑2 (MQ=255)
                                                                                       aCCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcattg     <  1:3112563/100‑2 (MQ=255)
                                                                                       aCCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcattg     <  1:4898210/100‑2 (MQ=255)
                                                                                       aCCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcattg     <  1:4829355/100‑2 (MQ=255)
                                                                                       aCCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcattg     <  1:4710495/100‑2 (MQ=255)
                                                                                       aCCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcattc     <  1:451489/100‑2 (MQ=255)
                                                                                       aCCATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatta     <  1:2428057/100‑2 (MQ=255)
                                                                                         cATTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatttca   <  1:3864725/100‑1 (MQ=255)
                                                                                              |                                                                                               
CCTCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCATTTATGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGTCATTTCAT  >  NC_007793/1533218‑1533407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑