| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 944,692 | A→T | intergenic (‑46/‑305) | SAUSA300_RS04665 ← / → SAUSA300_RS04670 | argininosuccinate synthase/glucose‑6‑phosphate isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 944,692 | 0 | A | T | 100.0% | 29.2 / NA | 11 | intergenic (‑46/‑305) | SAUSA300_RS04665/SAUSA300_RS04670 | argininosuccinate synthase/glucose‑6‑phosphate isomerase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (7/4); total (7/4) | |||||||||||
TTGTATCTAGTCCTCCTGAATATGCTAAAACAATTTTCTCTTTCATAAAATTCACCTCATTGTAGTTATCTGAATATTTCGTATGAACACAAGATAGCAAACTTTTAATGAAAATAAAACCATTATTTTACATATTTATTCATAAAATGCGATAGAGATAGTTAGAGTTGTAAGTGTAAATGCTTA > NC_007793/944601‑944786 | taacctCTAGTCCTCCTGAATATGCTAAAACAATTTTCTCTTTCATAAAATTCACCTCATTGTAGTTATCTGAATATTTCGTATGAACACATGATAGCaa > 1:903587/6‑100 (MQ=255) cctGAATATGCTAAAACAATTTTCTCTTTCATAAAATTCACCTCATTGTAGTTATCTGAATATTTCGTACGAACACATGATAGCAAACTTTTAATGaaaa > 1:3853148/1‑100 (MQ=255) cATAAAATTCACCTCATTGTAGTTATCTGAATATTTCGTATGAACACATGATAGCAAACTTTTAATGAAAATAAAACCATTATTTTACATATTTATTCAt > 1:4045131/1‑100 (MQ=255) aCCTCATTGTAGTTATCTGAATATTTCGTATGAACACATGATAGCAAACTTTTAATGAAAATAAAACCATTATTTTACATATTTATTCATAAAATGCGaa > 1:345357/1‑99 (MQ=255) aCCTCATTGTAGTTATCTGAATATTTCGTATGAACACATGATAGCAAACTTTTAATGAAAATAAAACCATTATTTTACATATTTATTCATAAAATGCGaa > 1:3671323/1‑99 (MQ=255) aCCTCATTGTAGTTATCTGAATATTTCGTATGAACACATGATAGCAAACTTTTAATGAAAATAAAACCATTATTTTACATATTTATTCATAAAATGCGAt < 1:4876899/100‑1 (MQ=255) aCCTCATTGTAGTTATCTGAATATTTCGTATGAACACATGATAGCAAACTTTTAATGAAAATAAAACCATTATTTTACATATTTATTCATAAAATGCGAt > 1:6055755/1‑100 (MQ=255) cTCATTGTAGTTATCTGAATATTTCGTATGAACACATGATAGCAAACTTTTAATGAAAATAAAACCATTATTTTACATATTTATTCATAAAATGCGGTag < 1:6166713/100‑1 (MQ=255) cTCATTGTAGTTATCTGAATATTTCGTATGAACACATGATAGCAAACTTTTAATGAAAATAAAACCATTATTTTACATATTTATTCATAAAATGCGATag < 1:4357658/100‑1 (MQ=255) cATTGTAGTTATCTGAATATTTCGTATGAACACATGATAGCAAACTTTTAATGAAAATAAAACCATTATTTTACATATTTATCCATAAAATGCGATagag > 1:5120586/1‑100 (MQ=255) acacATGATAGCAAACTTTTAATGAAAATAAAACCATTATTTTACATATTTATTCATAAAATGCGATAGAGATAGTTAGAGTTGTAAGTGTAAATGCttg < 1:5240773/100‑2 (MQ=255) | TTGTATCTAGTCCTCCTGAATATGCTAAAACAATTTTCTCTTTCATAAAATTCACCTCATTGTAGTTATCTGAATATTTCGTATGAACACAAGATAGCAAACTTTTAATGAAAATAAAACCATTATTTTACATATTTATTCATAAAATGCGATAGAGATAGTTAGAGTTGTAAGTGTAAATGCTTA > NC_007793/944601‑944786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |