D15 :: BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	895,012	0	C	A	73.8%	568.0 / 235.6	302	E40* (GAG→TAG)	SAUSA300_RS04395	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (4/75); new base A (1/222); total (5/297)
Fisher's exact test for biased strand distribution p-value = 1.77e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 303 total aligned reads displayed.

AAGTCACTTTGACATTTTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTAAAACTAAAGCACTTGCTATCA  >  NC_007793/894913‑895101

       tttGACATTTTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCtttg                                                                                    <  1:507774/100‑2 (MQ=255)

         tGACATTTTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGc                                                                                  <  1:3823953/100‑1 (MQ=255)

         tGACATTTTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGc                                                                                  <  1:4418807/100‑1 (MQ=255)

          gACATTTTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCa                                                                                 <  1:6150814/100‑1 (MQ=255)

          gACATTTTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCa                                                                                 <  1:4263633/100‑1 (MQ=255)

           aCATTTTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCag                                                                                <  1:1788354/100‑2 (MQ=255)

             gctcttccgaTCTGTTTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAAca                                                                              <  1:5771379/91‑2 (MQ=255)

               tttCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGtt                                                                            <  1:1983345/100‑1 (MQ=255)

               tcttccgaTCTGTTTTGTCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGtt                                                                            <  1:2401851/93‑1 (MQ=255)

               ccttccgaTCTGTTTTCTCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGtt                                                                            <  1:1358603/93‑1 (MQ=255)

                ttCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGtta                                                                           <  1:3596407/100‑1 (MQ=255)

                 ttccgaTCTG‑TTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGttatt                                                                         <  1:3446088/95‑1 (MQ=255)

                 tctttgttcgTTTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGttat                                                                          <  1:3333486/91‑1 (MQ=255)

                 tctttgtCTGTTTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGttat                                                                          <  1:4519993/94‑1 (MQ=255)

                  cATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGttatg                                                                         <  1:2230750/100‑2 (MQ=255)

                        cTGTTTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATAcc                                                                   <  1:5884469/100‑1 (MQ=255)

                        cTGTTTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATAcc                                                                   <  1:5321175/100‑1 (MQ=255)

                        cTGTTTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATAcc                                                                   <  1:5677061/100‑1 (MQ=255)

                        cTGTTTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATAcc                                                                   <  1:2325046/100‑1 (MQ=255)

                          gTTTTGTCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCAt                                                                 <  1:1619878/100‑1 (MQ=255)

                          gTTTTGTCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCAt                                                                 <  1:1809785/100‑1 (MQ=255)

                          gTTTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCaa                                                                 <  1:1555787/100‑2 (MQ=255)

                          gTTTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCAt                                                                 <  1:4292474/100‑1 (MQ=255)

                           ttttATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCAtt                                                                <  1:2868411/100‑1 (MQ=255)

                           ttttATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCAtt                                                                <  1:4105362/100‑1 (MQ=255)

                            tttATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCAtca                                                               <  1:3361930/100‑3 (MQ=255)

                              tATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATtata                                                             <  1:3688078/100‑1 (MQ=255)

                                   atgatatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTg                                                        <  1:1701262/97‑1 (MQ=255)

                                   ataataTTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTg                                                        <  1:3169623/100‑1 (MQ=255)

                                    tgatatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTga                                                       <  1:2486900/98‑1 (MQ=255)

                                    tgatatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTga                                                       <  1:3528395/98‑1 (MQ=255)

                                    tgatatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTga                                                       <  1:1740585/98‑1 (MQ=255)

                                    tgatatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTga                                                       <  1:165227/98‑1 (MQ=255)

                                    tgatatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTga                                                       <  1:5469823/98‑1 (MQ=255)

                                    tgatatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTga                                                       <  1:6225780/98‑1 (MQ=255)

                                    tccgatctgCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTga                                                       <  1:5548605/92‑1 (MQ=255)

                                    taataTTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTga                                                       <  1:1171746/100‑1 (MQ=255)

                                      atatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTgaag                                                     <  1:3050842/100‑1 (MQ=255)

                                      atatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTgaag                                                     <  1:916842/100‑1 (MQ=255)

                                       tatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTgaaga                                                    <  1:4922317/100‑1 (MQ=255)

                                       tatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTgaaga                                                    <  1:1579445/100‑1 (MQ=255)

                                       tatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAACTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTgaaga                                                    <  1:3234563/100‑1 (MQ=255)

                                             cgtcttTTAAAGCGTCTCTTACATTGTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAAtc                                              <  1:3484887/98‑2 (MQ=255)

                                               tcttTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGaa                                            <  1:420160/100‑1 (MQ=255)

                                                    tAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCt                                       <  1:4760335/100‑1 (MQ=255)

                                                     aaaTCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTg                                      <  1:5949247/100‑1 (MQ=255)

                                                     aaaGCGTCTCTTACATTTTTCCACAATTCGCTTTCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTg                                      <  1:2106235/100‑1 (MQ=255)

                                                     aaaGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTg                                      <  1:3123905/100‑1 (MQ=255)

                                                     aaaGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTg                                      <  1:5237500/100‑1 (MQ=255)

                                                     aaaGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTg                                      <  1:357215/100‑1 (MQ=255)

                                                      aaGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTgc                                     <  1:1290045/100‑2 (MQ=255)

                                                      aaGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGa                                     <  1:3254556/100‑1 (MQ=255)

                                                      aaGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGa                                     <  1:1513688/100‑1 (MQ=255)

                                                      aaGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGa                                     <  1:6077348/100‑1 (MQ=255)

                                                       ccgatctcTTACTTTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGag                                    <  1:2042430/96‑2 (MQ=255)

                                                          gTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCt                                 <  1:4068662/100‑1 (MQ=255)

                                                          gTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCt                                 <  1:4678643/100‑1 (MQ=255)

                                                           tctcTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTa                                <  1:5809253/100‑1 (MQ=255)

                                                           tctcTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTa                                <  1:1604888/100‑1 (MQ=255)

                                                           tctcTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTa                                <  1:3459889/100‑1 (MQ=255)

                                                           tctcTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTa                                <  1:6179976/100‑1 (MQ=255)

                                                            ctctTATATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATTCCATTATAATTTGAAGAAGAATGAAAACCTGAACCTAc                               <  1:2657321/100‑1 (MQ=255)

                                                            ctctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTag                               <  1:5662000/100‑2 (MQ=255)

                                                            ctctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTAc                               <  1:1445047/100‑1 (MQ=255)

                                                            ctctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTAc                               <  1:3013434/100‑1 (MQ=255)

                                                             ttccgatcttttCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACt                              <  1:1122880/92‑1 (MQ=255)

                                                             tctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAGCCTACt                              <  1:5864917/100‑1 (MQ=255)

                                                             tctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACt                              <  1:734836/100‑1 (MQ=255)

                                                             tctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACt                              <  1:6007007/100‑1 (MQ=255)

                                                              ctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtg                             <  1:944438/100‑1 (MQ=255)

                                                              ctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtg                             <  1:5361545/100‑1 (MQ=255)

                                                              ctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtg                             <  1:2123589/100‑1 (MQ=255)

                                                              ctTACATTTTTCCACAATTCGCTACCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACta                             <  1:648388/100‑2 (MQ=255)

                                                               ttACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgt                            <  1:5972539/100‑1 (MQ=255)

                                                               ttACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgt                            <  1:5637885/100‑1 (MQ=255)

                                                               ttACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgc                            <  1:4828156/100‑2 (MQ=255)

                                                               ttACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATCATAATTTGAAGAAGAATGAAAACCTGAACCTACtgt                            <  1:3915459/100‑1 (MQ=255)

                                                               ttACATTTTT‑CACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgtg                           <  1:1002435/100‑2 (MQ=255)

                                                               cttccgatctCCACATTTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgt                            <  1:4159133/91‑1 (MQ=255)

                                                                tACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgtc                           <  1:2751623/100‑2 (MQ=255)

                                                                tACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgta                           <  1:863455/100‑2 (MQ=255)

                                                                 gatcttttCCGCAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTagcagtt                          <  1:5255635/96‑7 (MQ=255)

                                                                 atctttttCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgttt                          <  1:6046587/97‑2 (MQ=255)

                                                                 aCATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgttg                          <  1:1234682/100‑1 (MQ=255)

                                                                  cATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgttaa                         <  1:802346/100‑3 (MQ=255)

                                                                   gatcttCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTgttgtt                        <  1:4332874/96‑1 (MQ=255)

                                                                   atctttctgcaATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTgttgtt                        <  1:309860/91‑1 (MQ=255)

                                                                   atctggccACAATTCGTTATCTGTCGTTTGCTCATCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTgttgtt                        <  1:4013494/94‑1 (MQ=255)

                                                                    tttttCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTa                       <  1:1326327/100‑1 (MQ=255)

                                                                    tttttCCACAATTCGCTATCTGTTATTTCAGAAGTTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTa                       <  1:4465528/100‑1 (MQ=255)

                                                                    tttttCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTa                       <  1:3967077/100‑1 (MQ=255)

                                                                    tttttCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTa                       <  1:5036282/100‑1 (MQ=255)

                                                                    tttttCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCACTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgttgcgt                       <  1:2797057/100‑4 (MQ=255)

                                                                    gatctCCACAGTTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTa                       <  1:1048229/96‑1 (MQ=255)

                                                                    cttttCCGCAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTa                       <  1:2556543/99‑1 (MQ=255)

                                                                         ccACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTAAAACt                  >  1:3416727/1‑100 (MQ=255)

                                                                                    gaTCTGTCGTCTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTAAAACTAAAGCACTTgt       <  1:2924191/99‑2 (MQ=255)

                                                                                     aTCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTAAAACTAAAGCACTTGCt      <  1:2670115/100‑1 (MQ=255)

                                                                                        tGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTAAAACTAAAGCACTTGCTATc   <  1:4868529/100‑1 (MQ=255)

                                                                                         gTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTAAAACTAAAGCACTTGCTATCa  <  1:220670/100‑1 (MQ=255)

AAGTCACTTTGACATTTTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTAAAACTAAAGCACTTGCTATCA  >  NC_007793/894913‑895101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`