D15 :: BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	895,009	0	G	C	73.4%	580.9 / 254.8	304	Q41E (CAA→GAA)	SAUSA300_RS04395	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (4/77); new base C (1/222); total (5/299)
Fisher's exact test for biased strand distribution p-value = 1.89e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 305 total aligned reads displayed.

TATAAGTCACTTTGACATTTTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTAAAACTAAAGCACTTGCTATCA  >  NC_007793/894910‑895101

tcttccgatcTTTGACCTTCTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTg                                                                                              <  1:5304721/91‑1 (MQ=255)

        aCTTTGACATTTTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCtt                                                                                      <  1:4483651/100‑1 (MQ=255)

           ttGACATTTTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCttttt                                                                                   <  1:4723779/100‑2 (MQ=255)

            taatcgtttCTTTGTCTGTTTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGc                                                                                  <  1:2430022/94‑1 (MQ=255)

            taatcgtttCTTTGTCTGTTTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGc                                                                                  <  1:3433405/94‑1 (MQ=255)

            tGACATTTTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGc                                                                                  <  1:5359192/100‑1 (MQ=255)

             gACATTTTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCa                                                                                 <  1:6150814/100‑1 (MQ=255)

             gACATTTTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCa                                                                                 <  1:2533971/100‑1 (MQ=255)

              aCATTTTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCag                                                                                <  1:1788354/100‑2 (MQ=255)

                gctcttccgaTCTGTTTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAAca                                                                              <  1:5771379/91‑2 (MQ=255)

                  tttCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGtt                                                                            <  1:1983345/100‑1 (MQ=255)

                  tcttccgaTCTGTTTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGtt                                                                            <  1:4961461/93‑1 (MQ=255)

                  ccttccgaTCTGTTTTCTCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGtt                                                                            <  1:1358603/93‑1 (MQ=255)

                      ccgaTCTGTAATATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGttatta                                                                        <  1:5119327/97‑1 (MQ=255)

                           cTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATAcc                                                                   >  1:4619292/1‑100 (MQ=255)

                           cTGTTTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATAcc                                                                   <  1:5677061/100‑1 (MQ=255)

                           cTGTTTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATAcc                                                                   <  1:5884469/100‑1 (MQ=255)

                             gTTTTGTCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCAt                                                                 <  1:1809785/100‑1 (MQ=255)

                             gTTTTGTCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCAt                                                                 <  1:4856741/100‑1 (MQ=255)

                             gTTTTGTCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCAt                                                                 <  1:1619878/100‑1 (MQ=255)

                             gTTTTATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCaa                                                                 <  1:1555787/100‑2 (MQ=255)

                              ttttATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCagt                                                                <  1:346570/100‑3 (MQ=255)

                              ttttATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCAtt                                                                <  1:2051271/100‑1 (MQ=255)

                               tttATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCAtga                                                               <  1:4076999/100‑3 (MQ=255)

                                 tATCAATGATATTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATtata                                                             <  1:4797582/100‑1 (MQ=255)

                                      atgatatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGGAACGTTATTAATACCATTATAATTTg                                                        <  1:5472164/97‑1 (MQ=255)

                                      atgatatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTg                                                        <  1:1701262/97‑1 (MQ=255)

                                      ataataTTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTg                                                        <  1:3169623/100‑1 (MQ=255)

                                       tgatatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTga                                                       <  1:3924177/98‑1 (MQ=255)

                                       tgatatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTga                                                       <  1:165227/98‑1 (MQ=255)

                                       tgatatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTga                                                       <  1:4282831/98‑1 (MQ=255)

                                       tgatatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTga                                                       <  1:1740585/98‑1 (MQ=255)

                                       tgatatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTga                                                       <  1:6225780/98‑1 (MQ=255)

                                       tgatatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTga                                                       <  1:3398578/98‑1 (MQ=255)

                                       taataTTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTga                                                       <  1:1171746/100‑1 (MQ=255)

                                         atatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTgaag                                                     <  1:916842/100‑1 (MQ=255)

                                         atatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTgaag                                                     <  1:3050842/100‑1 (MQ=255)

                                         atatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTgaag                                                     <  1:2215507/100‑1 (MQ=255)

                                         atatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATCTgaag                                                     <  1:2263551/100‑1 (MQ=255)

                                          tatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTgaaga                                                    <  1:5617838/100‑1 (MQ=255)

                                          tatTTGCGTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTgaaga                                                    <  1:1579445/100‑1 (MQ=255)

                                                        aaaTCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTg                                      <  1:5949247/100‑1 (MQ=255)

                                                        aaaGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTg                                      <  1:487905/100‑1 (MQ=255)

                                                        aaaGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTg                                      <  1:3123905/100‑1 (MQ=255)

                                                        aaaGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTg                                      <  1:4189406/100‑1 (MQ=255)

                                                        aaaGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTg                                      <  1:5237500/100‑1 (MQ=255)

                                                         aaGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTgc                                     <  1:1290045/100‑2 (MQ=255)

                                                         aaGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGa                                     <  1:2886036/100‑1 (MQ=255)

                                                         aaGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGa                                     <  1:1513688/100‑1 (MQ=255)

                                                         aaGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGa                                     <  1:3653309/100‑1 (MQ=255)

                                                         aaGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGa                                     <  1:6077348/100‑1 (MQ=255)

                                                          aGCGTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGag                                    <  1:5427377/100‑2 (MQ=255)

                                                             gTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCt                                 <  1:3340090/100‑1 (MQ=255)

                                                             gTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCt                                 <  1:2108732/100‑1 (MQ=255)

                                                             gTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCt                                 <  1:4039925/100‑1 (MQ=255)

                                                             gTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCt                                 <  1:3846411/100‑1 (MQ=255)

                                                             gTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCt                                 <  1:37307/100‑1 (MQ=255)

                                                             gTCTCTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCt                                 <  1:2657489/100‑1 (MQ=255)

                                                             atctcTTGCGTTTTTTCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCt                                 <  1:4204502/99‑1 (MQ=255)

                                                             atctcTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCt                                 <  1:344618/99‑1 (MQ=255)

                                                              tctcTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAAccgg                                <  1:3971391/100‑3 (MQ=255)

                                                              tctcTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTa                                <  1:1604888/100‑1 (MQ=255)

                                                              tctcTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTa                                <  1:5809253/100‑1 (MQ=255)

                                                              tctcTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTa                                <  1:6179976/100‑1 (MQ=255)

                                                              tctcTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTa                                <  1:4296445/100‑1 (MQ=255)

                                                              tctcTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTa                                <  1:413009/100‑1 (MQ=255)

                                                              tctcTTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTa                                <  1:3304931/100‑1 (MQ=255)

                                                               ctctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTag                               <  1:5662000/100‑2 (MQ=255)

                                                               ctctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTAc                               <  1:1445047/100‑1 (MQ=255)

                                                               ctctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTAc                               <  1:3013434/100‑1 (MQ=255)

                                                                ttccgatcttttCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACt                              <  1:1122880/92‑1 (MQ=255)

                                                                tctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAGCCTACt                              <  1:5864917/100‑1 (MQ=255)

                                                                tctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACt                              <  1:3533559/100‑1 (MQ=255)

                                                                tctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACt                              <  1:6007007/100‑1 (MQ=255)

                                                                tctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACt                              <  1:734836/100‑1 (MQ=255)

                                                                 ctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtg                             <  1:944438/100‑1 (MQ=255)

                                                                 ctTACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtg                             <  1:4374331/100‑1 (MQ=255)

                                                                 ctTACATTTTTCCACAATTCGCTACCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACta                             <  1:648388/100‑2 (MQ=255)

                                                                  ttACCTTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgt                            <  1:2150457/100‑1 (MQ=255)

                                                                  ttACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgt                            <  1:4454471/100‑1 (MQ=255)

                                                                  ttACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgt                            <  1:2760499/100‑1 (MQ=255)

                                                                  ttACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgt                            <  1:5972539/100‑1 (MQ=255)

                                                                  ttACATTTTT‑CACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgtg                           <  1:1002435/100‑2 (MQ=255)

                                                                   tACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgtt                           <  1:3485864/100‑1 (MQ=255)

                                                                   tACATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgta                           <  1:863455/100‑2 (MQ=255)

                                                                    gatcttttCCGCAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTagcagtt                          <  1:5255635/96‑7 (MQ=255)

                                                                    atctttttCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgttt                          <  1:6046587/97‑2 (MQ=255)

                                                                    aCATTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgttg                          <  1:1234682/100‑1 (MQ=255)

                                                                     cATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACtgttaa                         <  1:802346/100‑3 (MQ=255)

                                                                      atctttctgcaATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTgttgtt                        <  1:309860/91‑1 (MQ=255)

                                                                      aTTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTgttgtt                        <  1:2672485/100‑1 (MQ=255)

                                                                      aTTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTgttgtt                        <  1:2563732/100‑1 (MQ=255)

                                                                      aTTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTgttgtt                        <  1:3580091/100‑1 (MQ=255)

                                                                      aTTTTTCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTgttgtt                        <  1:50649/100‑1 (MQ=255)

                                                                       tttttCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTa                       <  1:1326327/100‑1 (MQ=255)

                                                                       tttttCCACAATTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTgttgttt                       <  1:3237042/100‑2 (MQ=255)

                                                                       gatctCCACAGTTCGCTATCTGTTATTTCAGAAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTa                       <  1:1048229/96‑1 (MQ=255)

                                                                                       gaTCTGTCGTCTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTAAAACTAAAGCACTTgt       <  1:2924191/99‑2 (MQ=255)

                                                                                         tCTGTCGTATGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTAAAACTAAAGCACTTGCTa     <  1:2802394/100‑1 (MQ=255)

                                                                                          cTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTAAAACTAAAGCACTTGCTag    <  1:2331431/100‑2 (MQ=255)

TATAAGTCACTTTGACATTTTCATTATCTGTTTTATCGATAATATTCGCTTCTTTTAAAGCGTCTCTTACATTTTTCCACAATTCGTTATCTGTCGTTTGCTCAGCTTTTGCAACGTTATTAATACCATTATAATTTGAAGAAGAATGAAAACCTGAACCTACTGTTGTTAAAACTAAAGCACTTGCTATCA  >  NC_007793/894910‑895101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`