Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1591889	1591901	13	1 [0]	[0] 1	SAUSA300_RS07855	integrase

AGAACTAACTCAAAAACTCGAAAACATTCCAAGTTAGCTTAAATCCGCCCTTTTTTTGCCCTTATATTTTTTACAAGCTTTATAAAACGCTTGAGAACAC  >  NC_007793/1591902‑1592001 |                                                                                                    agaACTAACTCAAAAACTCGAAAACATTCCAAGTTAGCTTAAATCCGCCCTTTTTTTGCCCTTATATTTTTTACAAGCTTTATAAAACGCTTGAGAacac  <  1:3516427/100‑1 (MQ=255) |                                                                                                    AGAACTAACTCAAAAACTCGAAAACATTCCAAGTTAGCTTAAATCCGCCCTTTTTTTGCCCTTATATTTTTTACAAGCTTTATAAAACGCTTGAGAACAC  >  NC_007793/1591902‑1592001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑