| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 1989511 = | 100 (1.110) | 4 (0.050) | 4/436 | 8.1 | 4.1% | intergenic (+4311/+52278) | unknown/unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| ? | 1 | 1989610 = | 93 (1.090) | intergenic (+4410/+52179) | unknown/unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAATGGAACGCACGGAGGTTGTCCCTACCGCAATCACCCGTTTACCGGCTTTTTGGGTCGCCAAAATGGCATCACACACTTCTTGCGGCACTTCCACATATTCCGCGTGCATCACGTGATCTTCAATATTTTCCACGCGAACCGGCTGAAATGTTCCCGCCCCAACGTGTAGCGTAACAAAGGTAAAATTTACCCCTTTGGCTTTGAGTTTCGTCAACAATTCATCGTCAAAATGTAGCCCTGCCGTTGGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/1989765‑1989511‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttggggcggGAACATTTCAGCCGGTTCGCGTGGAAAATATTGAAGATCACGTGATGCACGCGGAATATGTGGAAGTGCCGCAAGAAGTGTGTGATGCCATTTTGGCGACCCAAAAAGCCGGTAAACGGGTGATTGCGGTAGGGACAACCTCCGTGCGTTCCATTGAAAGT > 1/1989610‑1989770 caagGGAACGCACGGAGGTTGTCCCTCCCGCAATCCCCCGTTTCCCGGCTTTTTGGGTCGCCAAAATGGCATCACACCCTTCTTGCGGCACTTCCACATATCCCGCGTGCATCACGTGATCTTCAATATTTTCCACGCGACCCGGCTGAAATGTTCCCGCCCCAACGTGTAGCGTAACAAAGGTAAAATTTACCCCTTTGGCTTTGAGTTTCGTCAACAATTCATCGTCAAAATGTAGCCCTGCCGTTGGG < 1:204553/247‑1CAATGGAACGCACGGAGGTTGTCCCTACCGCAATCACCCGTTTACCGGCTTTTTGGGTCGCCAAAATGGCATCACACACTTCTTGCGGCACTTCCACATATTCCGCGTGCATCACGTGATCTTCAATATTTTCCACGCGAACCGGCTGAAATGTTCCCGCCCCAACGTGTAGCGTAACAAAGGTAAAATTTACCCCTTTGGCTTTGAGTTTCGTCAACAATTCATCGTCAAAATGTAGCCCTGCCGTTGGG > 1:307638/1‑251 aagGGAACGCACGGAGGTTGTCCCTACCGCAATCCCCCGTTTACCGGCTTTTTGGGTCGCCAAAATGGCATCACCCACTTCTTGCGGCACTTCCCCATATTCCGCGTGCATCACGTGATCTTCAATATTTTCCACGCGAACCGGCTGAAATGTTCCCGCCCCAACGTGTAGCGTAACAAAGGTAAAATTTACCCCTTTGGCTTTGAGTTTCGTCAACAATTCATCGTCAAAATGTAGCCCTGCCGTTGGGG < 1:431029/248‑1 AATGGACCGCACGGAGGTTGCCCCTACCGCAATCACCCGTTTACCGGCTTTTTGGGTCGCCAAAATGGCATCACACACTTCTTGCGGCACTTCCACATATTCCGCGTGCATCACGTGATCTTCAATATTTTCCACGCGAACCGGCTGAAATGTTCCCGCCCCAACGTGTAGCGTAACAAAGGTAAAATTTACCCCTTTGGCTTTGAGTTTCGTCAACAATTCATCGTCAAAATGTAGCCCTGCCGTTGGGG < 1:54496/251‑1 GTTGTCCCTACCGCAATCCCCCTTTTACCGGCTTTTTGGGTCGCCAAAATGGCATCACACACTTCTTGCGGCACTTCCACATATTCCGCGTGCATCACGTGATCTTCAATATTTTCCACGCGAACCGGCTGAAATGTTCCCGCCCCAACGTGTAGCGTAACAAAGGTAAAATTTACCCCTTTGGCTTTGAGTTTCGTCAACAATTCATCGTCAAAATGTAGCCCTGCCGTTGGGGCGGGAACATTTCAGC < 1:94534/250‑1 tttcCCGGCTTTTTGGGTCGCCAAAATGGCATCACACACTTCTTGCGGCCCTCCCACATATTCCGCGTGCATCACGTGATCTTCAATATTTTCCACGCAAACCGGCTGAAATGTTCCCGCCCCAACGTGTAGCGTAACAAAGGTAAAATTTACCCCTTTGGCTTTGAGTTTCTTCAACAATTCATCGTCAAAATGTAGCCCTGCCGTTGGGGCGGGAACATTTCAGCCGGTTCGCGTGGAAAATATTGAAG < 1:825961/247‑1 GCATCCCACCCTTCTTGCGGCACTTCCCCATA‑TCCGCGTGCATCACGTGATCTTCAATATTTTCCACGCGAACCGGCTGAAATGTTCCCGCCCCAACGTGTAGCGTAACAAAGGTAAAATTTACCCCTTTGGCTTTGAGTTTCGTCAACAATTCATCGTCAAAATGTAGCCCTGCCGTTGGGGCGGGAACATTTCAGCCGGTTCGCGTGGAAAATATTGAAGATCACGTGATGCACGCGGAATATGTGGA < 1:388612/250‑1 CGTGTAGCGTAACAAAGGTAAAATTTACCCCTTTGGCTTTGAGTTTCGTCAACAATTCATCGTCAAAATGTAGCCCTGCCGTTGGGGCGGGAACATTTCAGCCGGTTCGCGTGGAAAATATTGAAGATCACGTGATGCACGCGGAATATGTGGAAGTGCCGCAAGAAGGGTGTGATGCCATTTTGGCGACCCAAAAAGCCGGTAAACGGGGGATTGCGGTAGGGACAACCTCCGTGCGTTCCATTGAAAGg > 1:727458/1‑250 GGCGGGAACATTTCAGCCGGTTCGCGTGGAAAATATTGAAGATCACGTGATGCACGCGGAATATGTGGAAGTGCCGCAAGAAGTGTGTGATGCCATTTTGGCGACCCAAAAAGCCGGTAAACGGG > 1:110610/1‑125 CAATGGAACGCACGGAGGTTGTCCCTACCGCAATCACCCGTTTACCGGCTTTTTGGGTCGCCAAAATGGCATCACACACTTCTTGCGGCACTTCCACATATTCCGCGTGCATCACGTGATCTTCAATATTTTCCACGCGAACCGGCTGAAATGTTCCCGCCCCAACGTGTAGCGTAACAAAGGTAAAATTTACCCCTTTGGCTTTGAGTTTCGTCAACAATTCATCGTCAAAATGTAGCCCTGCCGTTGGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/1989765‑1989511‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttggggcggGAACATTTCAGCCGGTTCGCGTGGAAAATATTGAAGATCACGTGATGCACGCGGAATATGTGGAAGTGCCGCAAGAAGTGTGTGATGCCATTTTGGCGACCCAAAAAGCCGGTAAACGGGTGATTGCGGTAGGGACAACCTCCGTGCGTTCCATTGAAAGT > 1/1989610‑1989770 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |