| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 1971222 | 70 (0.780) | 6 (0.070) | 5/442 | 7.7 | 8.2% | intergenic (+136781/‑13803) | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| ? | 1 | = 1971246 | 67 (0.770) | intergenic (+136805/‑13779) | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTCCACCATCAGCAGCGAAACCCTGCAGATTCAAATGCACGCGCAAGGCATGACCATTTCCGACAACAAAGGGCGCCAACGCTCCGCCGCCGACGCAAAAATGCTGCTACGTGAAATTATCGGCATGGATTTCCCGTTGGAACAATTCGCTTTCTGGCTGAAAGGTCAACCGGAAGATAACGCCGATTATCAAGTGGGAGAAAACCATTTGTTAGCCACCTTCAGTCGCACTATCGACGGTAAACCCTGGACGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1970967‑1971222‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggacggcgATTGACATGGTATGACAAATAGTCCGCCGTCCAGGGTTTACCGTCGATAGTGCGACTGAAGGTGGCTAACAAATGGTTTTCTCCCACTTGATAATCGGCGTTATCTTCCGGTTGACCTTTCAGCCAGAAAGCGAATTGTTCCAACGGGAAATCCATGCCGATAATTTCACGTAGCAGCATTTTTGCGTCGGCGGCGGAGCGTTGGCGCCCTTTGTTGTCGGAAATGGTCATGCCTTGCGCGTGCATTT < 1/1971246‑1970999 TTCCACCATCAGCAGCGAAACCCTGCAGATTCAAATGCACGCGCAAGGCATGACCATTTCCGACAACAAAGGGCGCCAACGCTCCGCCGCCGACGCAAAAATGCTGCTACGTGAAATTATCGGCATGGATTTCCCGTTGGAACAATTCGCTTTCTGGCTGAAAGGTCAACCGGAAGATAACGCCGATTATCAAGTGGGAGAAAACCATTTGTTAGCCACCTTCAGTCGCACTATCGACGGTAAACCCTGGA > 1:447323/1‑251 TCCACCATCAGCAGCGAAACCCTGCAGATTCAAATGCACGCGCAAGGCATGACCATTTCCGACAACAAAGGGCGCCAACGCTCCGCCGCCGACGCAAAAATGCTGCTACGTGAAATTATCGGCATGGATTTCCCGTTGGAACAATTCGCTTTCTGGCTGAAAGGTCAACCGGAAGATAACGCCGATTATCAAGTGGGAGAAAACCATTTGTTAGCCACCTTCAGTCGCACTATCGACGGTAAACCCTGGAC < 1:667046/251‑1 TCCACCATCAGCAGCGAAACCCTGCAGATTCAAATGCACGCGCAAGGCATGACCATTTCCGACAACAAAGGGCGCCAACGCTCCGCCGCCGACGCAAAAATGCTGCTACGTGAAATTATCGGCATGGATTTCCCGTTGGAACAATTCGCTTTCTGGCTGAAAGGTCAACCGGAAGATAACGCCGATTATCAAGTGGGAGAAAACCATTTGTTAGCCACCTTCAGTCGCACTATCGACGGTAAACCCTGGAC < 1:728420/251‑1 CCACCATCAGCAGCGAAACCCTGCAGATTCAAATGCACGCGCAAGGCATGACCATTTCCGACAACAAAGGGCGCCAACGCTCCGCCGCCGACGCAAAAATGCTGCTACGTGAAATTATCGGCATGGATTTCCCGTTGGAACAATTCGCTTTCTGGCTGAAAGGTCAACCGGAAGATAACGCCGATTATCAAGTGGGAGAAAACCATTTGTTAGCCACCTTCAGTCGCACTATCGACGGTAAACCCTGGAC < 1:446252/250‑1 AGGCATGACCATTTCCGACAACAAAGGGCGCCAACGCTCCGCCGCCGACGCAAAAATGCTGCTACGTGAAATTATCGGCATGGATTTCCCGTTGGAACAATTCGCTTTCTGGCTGAAAGGTCAACCGGAAGATAACGCCGATTATCAAGTGGGAGAAAACCATTTGTTAGCCACCTTCAGTCGCACTATCGACGGTAAACCCTGGAC < 1:495631/207‑1 CTTTCTGGCTGAAAGGTCAACCGGAAGATAACGCCGATTATCAAGTGGGAGAAAACCATTTGTTAGCCACCTTCAGTCGCACTATCGACGGTAAACCCTGGACGGCGATTGACATGGTATGACAAATAGTCCGCCGTCCAGGGTTTACCGTCGATAGTGCGACTGAAGGTGGCTAACAAATGGTTTTCTCCCACTTGATAATCGGCGTTATCTTCCGGTTGACCTTTCAGCCAGAAAGCGAATTGTTCCAA > 1:516104/1‑251 AGTGGGAGAAAACCATTTGTTAGCCACCTTCAGTCGCACTATCGACGGTAAACCCTGGACGGCGATTGACATGGTATGACAAATAGTCCGCCGTCCAGGGTTTACCGTCGATAGTGCGACTGAAGGTGGCTAACAAATGGTTTTCTCCCACTTGATAATCGGCGTTATCTTCCGGTTGACCTTTCAGCCAGAAAGCGAATTGTTCCAACGGGAAATCCATGCCGATAATTTCACGTAGCAGCATTTTTGCG > 1:567942/1‑251 TTTGTTAGCCACCTTCAGTCGCACTATCGACGGTAAACCCTGGACGGCGATTGACATGGTATGACAAATAGTCCGCCGTCCAGGGTTTACCGTCGATAGTGCGACTGAAGGTGGCTAACAAATGGTTTTCTCCCACTTGATAATCGGCGTTATCTTCCGGTTGACCTTTCAGCCAGAAAGCGAATTGTTCCAACGGGAAATCCATGCCGATAATTTCACGTAGCAGCATTTTTGCGTCGGCGGCGGAGCGT > 1:37276/1‑251 ATCGACGGTAAACCCTGGACGGCGATTGACATGGTATGACAAATAGTCCGCCGTCCAGGGTTTACCGTCGATAGTGCGACTGAAGGTGGCTAACAAATGGTTTTCTCCCACTTGATAATCGGCGTTATCTTCCGGTTGACCTTTCAGCCAGAAAGCGAATTGTTCCAACGGGAAATCCATGCCGATAATTTCACGTAGCAGCATTTTTGCGTCGGCGGCGGAGCGTTGGCGCCCTTTGTTGTCGGAAATGG > 1:317550/1‑251 ATCGACGGTAAACCCTGGACGGCGATTGACATGGTATGACAAATAGTCCGCCGTCCAGGGTTTACCGTCGATAGTGCGACTGAAGGTGGCTAACAAATGGTTTTCTCCCACTTGATAATCGGCGTTATCTTCCGGTTGACCTTTCAGCCAGAAAGCGAATTGTTCCAACGGGAAATCCATGCCGATAATTTCACGTAGCAGCATTTTTGCGTCGGCGGCGGAGCGTTGGCGCCCTTTGTTGTCGGAAATGG > 1:363073/1‑251 ACCCTGGACGGCGATTGACATGGTATGACAAATAGTCCGCCGTCCAGGGTTTACCGTCGATAGTGCGACTGAAGGTGGCTAACAAATGGTTTTCTCCCACTTGATAATCGGCGTTATCTTCCGGTTGACCTTTCAGCCAGAAAGCGAATTGTTCCAACGGGAAATCCATGCCGATAATTTCACGTAGCAGCATTTTTGCGTCGGCGGCGGAGCGTTGGCGCCCTTTGTTGTCGGAAATGGTCATGCCTTG > 1:587952/1‑250 GCGATTGACATGGTATGACAAATAGTCCGCCGTCCAGGGTTTACCGTCGATAGTGCGACTGAAGGTGGCTAACAAATGGTTTTCTCCCACTTGATAATCGGCGTTATCTTCCGGTTGACCTTTCAGCCAGAAAGCGAATTGTTCCAACGGGAAATCCATGCCGATAATTTCACGTAGCAGCATTTTTGCGTCGGCGGCGGAGCGTTGGCGCCCTTTGTTGTCGGAAATGGTCATGCCTTGCGCGTGCATTT > 1:663664/1‑251 GCGATTGACATGGTATGACAAATAGTCCGCCGTCCAGGGTTTACCGTCGATAGTGCGACTGAAGGTGGCTAACAAATGGTTTTCTCCCACTTGATAATCGGCGTTATCTTCCGGTTGACCTTTCAGCCAGAAAGCGAATTGTTCCAACGGGAAATCCATGCCGATAATTTCACGTAGCAGCATTTTTGCGTCGGCGGCGGAGCGTTGGCGCCCTTTGTTGTCGGAAATGGTCATGCC > 1:118874/1‑237 TTCCACCATCAGCAGCGAAACCCTGCAGATTCAAATGCACGCGCAAGGCATGACCATTTCCGACAACAAAGGGCGCCAACGCTCCGCCGCCGACGCAAAAATGCTGCTACGTGAAATTATCGGCATGGATTTCCCGTTGGAACAATTCGCTTTCTGGCTGAAAGGTCAACCGGAAGATAACGCCGATTATCAAGTGGGAGAAAACCATTTGTTAGCCACCTTCAGTCGCACTATCGACGGTAAACCCTGGACGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1970967‑1971222‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggacggcgATTGACATGGTATGACAAATAGTCCGCCGTCCAGGGTTTACCGTCGATAGTGCGACTGAAGGTGGCTAACAAATGGTTTTCTCCCACTTGATAATCGGCGTTATCTTCCGGTTGACCTTTCAGCCAGAAAGCGAATTGTTCCAACGGGAAATCCATGCCGATAATTTCACGTAGCAGCATTTTTGCGTCGGCGGCGGAGCGTTGGCGCCCTTTGTTGTCGGAAATGGTCATGCCTTGCGCGTGCATTT < 1/1971246‑1970999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |