| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 1903137 = | 91 (1.010) | 7 (0.120) | 7/306 | 5.0 | 9.3% | intergenic (+68696/‑81888) | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| ? | 1 | = 1903132 | 76 (1.270) | intergenic (+68691/‑81893) | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCTTTTGGGCGACTGGACAACTGACGATTGGCATCCGCAACAAGTGGCTGACAGCCTCGCGCAAAATGTGGATAAAATTCGTCTGCGCATTGAGGTACAGCCGGGCATTAGCCGCAACGCGCTGGCATTTAGGGATATTACAATTCGGGTGGGACATAAGTGATTTTCAAAACGCCGTAAAAATCCACTGCATTTTTATAATCAAAATTTGACAATAAAAAAGGACATATACAATGCAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/1903448‑1903137‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaaAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTCTTCCTAAGTTCGCATAAAATTAGAAATTCCTCTTCTAAATTTAACTGGTTAAATTTCTAAACTCGCGTGGTCGGCTACAACGGATATTCTTTATTTGAGCCGATAAACTCGCGATCTTCTTTGTAAATACGCACCGTCGGATCTGATACCACATTCGGATGAAGCGGATTCG < 1/1903132‑1902884 GCTTTTGGGCGACTGGACAACTGACGATTGGCATCCGCAACAAGTGGCTGACAGCCTCGCGCAAAATGTGGATAAAATTCGTCTGCGCATTGAGGTACAGCCGGGCATTAGCCGCAACGCGCTGGCATTTAGGGATATTACAATTCGGGTGGGACATAAGTGATTTTCAAAACGCCGTAAAAATCCACTGCATTTTTATAATCAAAATTTGACAATAAAAAAGGACATATACAATGCAAACAAACAAACAA > 1:152827/1‑251 GGACAACTGACGATTGGCATCCGCAACAAGTGGCTGACAGCCTCGCGCAAAATGTGGATAAAATTCGTCTGCGCATTGAGGTACAGCCGGGCATTAGCCGCAACGCGCTGGCATTTAGGGATATTACAATTCGGGTGGGACATAAGTGATTTTCAAAACGCCGTAAAAATCCACTGCATTTTTATAATCAAAATTTGACAATAAAAAAGGACATATACAATGCAAACAAACAAACAAACAAACAAACAAA > 1:620845/1‑250 AGTGGCTGACAGCCTCGCGCAAAATGTGGATAAAATTCGTCTGCGCATTGAGGTACAGCCGGGCATTAGCCGCAACGCGCTGGCATTTAGGGATATTACAATTCGGGTGGGACATAAGTGATTTTCAAAACGCCGTAAAAATCCACTGCATTTTTATAATCAAAATTTGACAATAAAAAAGGACATATACAATGCAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAA > 1:852525/1‑250 GGCTGACAGCCTCGCGCAAAATGTGGATAAAATTCGTCTGCGCATTGAGGTACAGCCGGGCATTAGCCGCAACGCGCTGGCATTTAGGGATATTACAATTCGGGTGGGACATAAGTGATTTTCAAAACGCCGTAAAAATCCACTGCATTTTTATAATCAAAATTTGACAATAAAAAAGGACATATACAATGCAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAA > 1:773129/1‑251 GACAGCCTCGCGCAAAATGTGGATAAAATTCGTCTGCGCATTGAGGTACAGCCGGGCATTAGCCGCAACGCGCTGGCATTTAGGGATATTACAATTCGGGTGGGACATAAGTGATTTTCAAAACGCCGTAAAAATCCACTGCATTTTTATAATCAAAATTTGACAATAAAAAAGGACATATACAATGCAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAA > 1:584664/1‑251 CCTCGCGCAAAATGTGGATAAAATTCGTCTGCGCATTGAGGTACAGCCGGGCATTAGCCGCAACGCGCTGGCATTTAGGGATATTACAATTCGGGTGGGACATAAGTGATTTTCAAAACGCCGTAAAAATCCACTGCATTTTTATAATCAAAATTTGACAATAAAAAAGGACATATACAATGCAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAC < 1:578902/251‑1 CCTCGCGCAAAATGTGGATAAAATTCGTCTGCGCATTGAGGTACAGCCGGGCATTAGCCGCAACGCGCTGGCATTTAGGGATATTACAATTCGGGTGGGACATAAGTGATTTTCAAAACGCCGTAAAAATCCACTGCATTTTTATAATCAAAATTTGACAATAAAAAAGGACATATACAATGCAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAC < 1:335666/247‑1 CGCAAAATGTGGATAAAATTCGTCTGCGCATTGAGGTACAGCCGGGCATTAGCCGCAACGCGCTGGCATTTAGGGATATTACAATTCGGGTGGGACATAAGTGATTTTCAAAACGCCGTAAAAATCCACTGCATTTTTATAATCAAAATTTGACAATAAAAAAGGACATATACAATGCAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACA > 1:845050/1‑251 CGCAAAATGTGGATAAAATTCGTCTGCGCATTGAGGTACAGCCGGGCATTAGCCGCAACGCGCTGGCATTTAGGGATATTACAATTCGGGTGGGACATAAGTGATTTTCAAAACGCCGTAAAAATCCACTGCATTTTTATAATCAAAATTTGACAATAAAAAAGGACATATACAATGCAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAC < 1:475084/250‑1 CATTAGCCGCAACGCGCTGGCATTTAGGGATATTACAATTCGGGTGGGACATAAGTGATTTTCAAAACGCCGTAAAAATCCACTGCATTTTTATAATCAAAATTTGACAATAAAAAAGGACATATACAATG‑‑‑‑‑‑‑‑‑‑‑‑CAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAA > 1:65908/1‑251 CGCAACGCGCTGGCATTTAGGGATATTACAATTCGGGTGGGACATAAGTGATTTTCAAAACGCCGTAAAAATCCACTGCATTTTTATAATCAAAATTTGACAATAAAAAAGGACATATACAATGCAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATA < 1:468218/251‑1 GGATATTACAATTCGGGTGGGACATAAGTGATTTTCAAAACGCCGTAAAAATCCACTGCATTTTTATAATCAAAATTTGACAATAAAAAAGGACATATACAATGCAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGT < 1:411542/250‑1 GCATTTTTATAATCAAAATTTGACAATAAAAAAGGACATATACAATGCAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAATAAACAAACAAACAAAAGG < 1:30490/126‑1 AAAAAAGGACATATACAATGCAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTCTTCCTAAGTTCGCATAAAATTAGAAATTCCTCTTCTAAATTTAACTGGTTAAATTTCTAAACTCGCGTGGTCGGCTAC < 1:525244/251‑1 CATATACAATGCAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATT > 1:820081/1‑124 ATACAATGCAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTC > 1:689548/1‑161 atacaatgCAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATA > 1:791092/9‑131 AACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTCTTCCTAAGTTCGCATAAAATTAGAAATTCCTCTTCTAAATTTAACTGGTTAAATTTCTAAACTCGCGTGGTCGGCTACAACGGATATTCTTTATTTGAGCCGATAAA > 1:383038/1‑250 CAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTG > 1:519977/1‑135 CAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTCTTCCTAAGTTCGCATAAAATTAGAAATTCCTCTTCTAAATTTAACTGGTTAAATTTCTAAACTCGCGTGGTCGGCTACAACGGATATTCTTTATTTGAGCCGATAAACTCGCGATCTTCTTTGTAA > 1:607646/1‑251 CAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTCTTCCTAAGTTCGCATAAAATTAGAAATTCCTCTTCTAAATTTAACTGGTTAAATTTCTAAACTCGCGTGGTCGGCTACAACGGATATTCTTTATTTGAGCCGATAAACTCGCGATCTTCTTTGTAAATACGCAC < 1:841117/251‑1 CAAACAAACAAACAAACAAACAAACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTCTTCCTAAGTTCGCATAAAATTAGAAATTCCTCTTCTAAATTTAACTGGTTAAATTTCTAAACTCGCGTGGTCGGCTACAACGGATATTCTTTATTTGAGCCGATAAACTCGCGATCTTCTTTGTAAATACGCACCGT > 1:170129/1‑250 CAAACAAACAAACAAACAAACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTCTTCCTAAGTTCGCATAAAATTAGAAATTCCTCTTCTAAATTTAACTGGTTAAATTTCTAAACTCGCGTGGTCGGCTACAACGGATATTCTTTATTTGAGCCGATAAACTCGCGATCTTCTTTGTAAATACGCACCGTCGGAT > 1:187702/1‑251 CAAACAAACAAACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTCTTCCTAAGTTCGCATAAAATTAGAAATTCCTCTTCTAAATTTAACTGGTTAAATTTCTAAACTCGCGTGGTCGGCTACAACGGATATTCTTTATTTGAGCCGATAAACTCGCGATCTTCTTTGTAAATACGCACCGTCGGATCTGATAC > 1:635738/1‑250 CAAACAAACAAACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACC < 1:311613/58‑1 CAAACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCAT < 1:691845/52‑1 AACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTCTTCCTAAGTTCGCATAAAATTAGAAATTCCTCTTCTAAATTTAACTGGTTAAATTTCTAAACTCGCGTGGTCGGCTACAACGGATATTCTTTATTTGAGCCGATAAACTCGCGATCTTCTTTGTAAATACGCACCGTCGGATCTGATACCACATTCGGAT < 1:542562/251‑1 AACAAACAAACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTCTTCCTAAGTTCGCATAAAATTAGAAATTCCTCTTCTAAATTTAACTGGTTAAATTTCTAAACTCGCGTGGTCGGCTACAACGGATATTCTTTATTTGAGCCGATAAACTCGCGATCTTCTTTGTAAATACGCACCGTCGGATCTGATACCACATTCGGAT < 1:35714/251‑1 AACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTCTTCCTAAGTTCGCATAAAATTAGAAATTCCTCTTCTAAATTTAACTGGTTAAATTTCTAAACTCGCGTGGTCGGCTACAACGGATATTCTTTATTTG > 1:561977/1‑180 ACAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTCTTCCTAAGTTCGCATAAAATTAGAAATTCCTCTTCTAAATTTAAC > 1:15670/1‑127 CAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTCTTCCTAAGTTCGCATAAAATTAGAAATTCCTCTTCTAAATTTAACTGGTTAAATTTCTAAACTCGCGTGGTCGGCTACAACGGATATTCTTTATTTGAGCCGATAAACTCGCGATCTTCTTTGTAAATACGCACCGTCGGATCTGATACCACATTCGGAT < 1:218565/241‑1 CAAAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTCTTCCTAAGTTCGCATAAAATTAGAAATTCCTCTTCTAAATTTAACTGGTTAAATTTCTAAACTCGCGTGGTCGGCTACAACGGATATTCTTTATTTGAGCCGATAAACTCGCGATCTTCTTTGT > 1:621005/1‑205 AAAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTCTTCCTAAGTTCGCATAAAATTAGAAATTCCTCTTCTAAATTTAACTGGTTAAATTTCTAAACTCGCGTGGTCGGCTACAACGGATATTCTTTATTTGAGCCGATAAACTCGCGATCTTCTTTGTAAATACGCACCGTCGGATCTGATACCACATTCGGATGAAGCGGATTCG > 1:204121/1‑251 GCTTTTGGGCGACTGGACAACTGACGATTGGCATCCGCAACAAGTGGCTGACAGCCTCGCGCAAAATGTGGATAAAATTCGTCTGCGCATTGAGGTACAGCCGGGCATTAGCCGCAACGCGCTGGCATTTAGGGATATTACAATTCGGGTGGGACATAAGTGATTTTCAAAACGCCGTAAAAATCCACTGCATTTTTATAATCAAAATTTGACAATAAAAAAGGACATATACAATGCAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/1903448‑1903137‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaaAGGAGCGTGCTATGTTTAAACAAGCACCCCTACCATTAGTCGGTGTTGATAGGTAAAATTGGTGTAGCGTTATTGTCTTCCTAAGTTCGCATAAAATTAGAAATTCCTCTTCTAAATTTAACTGGTTAAATTTCTAAACTCGCGTGGTCGGCTACAACGGATATTCTTTATTTGAGCCGATAAACTCGCGATCTTCTTTGTAAATACGCACCGTCGGATCTGATACCACATTCGGATGAAGCGGATTCG < 1/1903132‑1902884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |