| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 1420800 = | 53 (0.590) | 3 (0.040) | 3/404 | 8.3 | 6.1% | intergenic (+88182/+166333) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| ? | 1 | = 1420794 | 45 (0.570) | intergenic (+88176/+166339) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTCATTTCGTAAAATTCACGGCTGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAGGCAAGGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/1421073‑1420800‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcaaggcaaggcaaggcaaggcaagCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGCCTCACCCAATAATTTCAATTCGCGATTTCTCACTTGTTTTTTCAGAATGTCTAAAAATTCTTCCACGGTGAAGG < 1/1420794‑1420554 TTCATTTCGTAAAATTCACGGCTGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGC < 1:797517/251‑1TTCATTTCGTAAAATTCACGGCTGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGC < 1:697679/251‑1 TTCGTAAAATTCACGGCTGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGC < 1:44961/251‑1 TTCGTAAAATTCACGGCTGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGC < 1:103098/251‑1 AAATTCACGGCTGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCA < 1:116406/251‑1 ATTCACGGCTGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAG > 1:566949/1‑251 TCACGGCTGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAGGC < 1:574410/251‑1 CACGGCTGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAGGCA < 1:55476/251‑1 CACGGCTGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAGGCA < 1:765653/251‑1 GCTGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAGGCAAGG > 1:290893/1‑250 TGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAGGCAAGGCAA > 1:468684/1‑251 ATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAGGC > 1:692201/1‑242 ATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTT < 1:319732/251‑1 CATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAAT > 1:70170/1‑251 AAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAGGCAAGGC > 1:579502/1‑161 GTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATAT > 1:746455/1‑205 AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGCCTCACCCAATAATTTCAATTCGCGATTTCTCACTTGTTTTTTCAGAATGTCTAAAAA > 1:216479/1‑251 AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGCCTCACCCAATAATTTCAATTCGCGATTTCTCACTTG > 1:117294/1‑230 AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGCCTCACCCAATAATTTC > 1:292908/1‑210 GCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGCCTCACCCAATAATTTCAATTCGCGATTTCTCACTTGTTTTTTCAGAATGTCTAAAAATTCTTCCACGG < 1:808966/250‑1 GGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGCCTCACCCAATAATTTCAATTCGCGATTTCTCACTTGTTTTTTCAGAATGTCTAAAAATTCTTCCACGGTGAAG > 1:512890/1‑251 GGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGCGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGCCTCACCCAATAATTTCAATTCGCGATTTCTCACTTGTTTTTTCAGAATGTCTAAAAATTCTTCCACGGTGAAG > 1:645561/1‑251 GCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGCCTCACCCAATAATTTCAATTCGCGATTTCTCACTTGTTTTTTCAGAATGTCTAAAAATTCTTCCACGGTGAAGG > 1:476279/1‑251 TTCATTTCGTAAAATTCACGGCTGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAGGCAAGGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/1421073‑1420800‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcaaggcaaggcaaggcaaggcaagCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGCCTCACCCAATAATTTCAATTCGCGATTTCTCACTTGTTTTTTCAGAATGTCTAAAAATTCTTCCACGGTGAAGG < 1/1420794‑1420554 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |