| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,709,179 | 0 | A | C | 39.1% | 89.6 / 12.7 | 46 | L54V (TTG→GTG) | unknown | N‑acetylmannosamine‑6‑phosphate 2‑epimerase (EC 5.1.3.9) |
| Reads supporting (aligned to +/- strand): ref base A (27/1); new base C (0/18); total (27/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCGCCATGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAA‑C‑GGGGTGATA‑CGTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAATGGAGACATTCTACTAAAATAAAA > 1/1708933‑1709409 | ccGCCATGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAA‑C‑GGGGTGATA‑CGTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAAccc > 1:307802/1‑250 (MQ=255) tGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAA‑C‑GGGGTGATA‑CGTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAAccccgccgc > 1:309815/1‑250 (MQ=255) tGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAA‑C‑GGGGTGATA‑CGTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAAccccgccgc > 1:297658/1‑250 (MQ=255) aGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAA‑C‑GGGGTGATA‑CGTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAAccccgccgccccgc > 1:531574/1‑250 (MQ=255) gCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAA‑C‑GGGGTGATA‑CGTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATaa > 1:406630/1‑251 (MQ=255) ttAACCTCATTTTCAACCTCTCCCGGGCGCGGGCGACGAGTCCCTCCCACGGCGATAATGTCCGCCCGGGCGTGCGCAAAGTCTTCAATGTCCTGTAAAAA‑C‑GGGGTGATC‑CGTCCCGGCCTGTGGGGAAGCTCCCGTTTGACGATCCCGATGACCGGCACATTTCCGGTGGGGCGCAGGGTTTTTAAATTGTCCACCCCTTCAATGCCCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATagc < 1:338110/251‑1 (MQ=255) taacccGCACTTTCACTCTCTCCCGGGCGCGGGCGACGAGTCCCATCCACGGCGATAATGCCCGCTCCGGCGTGCGCAAAGTCTTCAATGTCCTGAAAAAA‑C‑GGGGTGATA‑CGTACCGGGCTGTCGGGAAGACCCCGTTTGACGATCCCGATGACCGGCACTTTTCCGGTGGGGCGCACGGTTTTTAAATTGCCCACCCCTTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATagc < 1:127139/247‑1 (MQ=255) ttCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAA‑C‑GGGGTGATA‑CGTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAAttt > 1:163960/1‑251 (MQ=255) ttCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAA‑C‑GGGGTGATA‑CGTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAAttt > 1:114210/1‑251 (MQ=255) tctcTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAA‑C‑GGGGTGATA‑CGTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGACAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGt > 1:132594/1‑251 (MQ=255) cccctcccGGGCGGGGGCGACGAGTCCCACCCACGGCGATAATGTCCGCCCCGGCGGGCGCAAATTCTCCAATGTCCTG‑AAAAA‑CGGGGGTGATA‑CGTCCCGGGCTGGGGGGAAGACCCCGTTTGACGATCCCGATGACCGCCACATTTCCGGTCGGGCGCACGGTTTTAAAATTGTCCCCCCCTTAAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGt < 1:313372/245‑1 (MQ=255) gggcgACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAA‑C‑GGGGTGATA‑CGTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGAc > 1:79716/1‑250 (MQ=255) aggaGTCCCACCCAGGGCGATAATGCCCGCCCGGGCGTGCGCCAAGTTTTCAATGTCCT‑TAAAAA‑CGGGGGTGATA‑CGTACGGGGCTGTCGGGAAGATCCCTTTTGACGATCCCGATGACCGGCACATTTCCGGGCGGGCGCACGGTTTTTAAATTGCCCCCCCCTTAAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACcatca < 1:511414/248‑1 (MQ=255) gTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAA‑C‑GGGGTGATA‑CGTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCa > 1:18533/1‑250 (MQ=255) cgccacccgcgggaaTAATGCCCCCTCCGGCGGGCCCAAAGTCTTCATTTTCCTGTAAAAC‑C‑GGGGTGATA‑CGTCCGGGGCTTGCGGGAAGCTCCCTTTTGACAATCCCGATGCCCGGCACTTTTACGGTGGGGCGCACGGTTTTTAATTTGTCCCCCCCTTCATTGCCCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCAc < 1:594410/236‑1 (MQ=255) gCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAA‑C‑GGGGTGATA‑CGTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAaga > 1:339153/1‑251 (MQ=255) gCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGAAAAAA‑C‑GGGGTGATA‑CGTCCCGGGCTGTGGGGAAGATCCCGTTTGCCGATACCGATGATCGGCACATTTCCGGTCGGGCGCCCGGTTTTTAAATTGCCCACCCCTTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAag < 1:133700/250‑1 (MQ=255) aTAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAA‑C‑GGGGTGATA‑CGTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAgg > 1:466906/1‑250 (MQ=255) cGCTCGGGCGTGCGACAATTCTTCATTGTCCTATAAAAG‑C‑GGGGTGATA‑CGTACCGGGCTTTGGGGAATACCCCGTTTGACGATACCGATGCTCGGCACTTTTCCGGTCGGGCGCGCGGTTTTTAAATTGTCCCCCCCTTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATc < 1:178169/251‑1 (MQ=255) cccccAAGTCTTAAATGTCCT‑TAAAAACC‑GGGGTG‑TACCGTCCGGGGCTGTCGGGAAGATCCCGTTTGCCGATCCCGAGGACCGGCACTTTTACGGTCGGGCGCCCGGTTTTAAAATTGCCCCCCCCTCCAAGGCCCACCCCCGCCCCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAg < 1:79821/247‑1 (MQ=255) gggTGATA‑CGTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAAtttt > 1:501619/1‑251 (MQ=255) gATA‑CGTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTgag > 1:370186/1‑251 (MQ=255) gTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAg > 1:242431/1‑250 (MQ=255) gccGGGAAGACCCCTTTTGACGATCCCGATGATCGGCACATTTCCGGTCGGGCGCCCGGCTTTAAATTTGCCCACCCCTTCAATGCGCACCCCCCCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTtgatg < 1:413444/220‑1 (MQ=255) tCGGGAAGATCCCGTTTGACAATACCGATGATCGGCTCATTTACGGGGGGGCGCAGGCCTTTTAAATTGTCCACCCCTTAAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAg < 1:406742/250‑1 (MQ=255) gATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAActc > 1:140030/1‑249 (MQ=255) cGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAActc > 1:77860/1‑237 (MQ=255) cGATACCGATGACCGGCACATTTGCGGTGGGGCGCCCGGTTTTTAAATTGCCCCCCCCTTCAATGCCCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGc < 1:199503/251‑1 (MQ=255) cttttgcggtggggcgccgggtttttAAATTGTCCACACCTTCAATGCCCACCCCCGCCGTCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTc < 1:549506/229‑1 (MQ=255) caTTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCttttt > 1:518667/1‑227 (MQ=255) caTTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCAtt > 1:520836/1‑250 (MQ=255) aTTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCAtt > 1:153676/1‑249 (MQ=255) cgggTCGGGCGCACGGTTTTAAAATTGCCCCCACCTCCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTc < 1:449847/249‑1 (MQ=255) ccgggcGGGCGCCCGGTTTTTAATTTGCCCCCCCCTTCAATGCCCACCCCCCCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTc < 1:108741/246‑1 (MQ=255) ccGGTGGGGCGCACGGTTTTTAAATGACCCCCCCCTAAAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTc < 1:64573/250‑1 (MQ=255) ccGGTCGGGCGCCCGGCTTTAAAATTGCCCCCCCCTTCAAGGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTc < 1:495702/250‑1 (MQ=255) cGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCa > 1:8781/1‑251 (MQ=255) cGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAATgg > 1:406998/1‑251 (MQ=255) gCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTc > 1:154240/1‑236 (MQ=255) gCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAATGGAGACATTcta > 1:253367/1‑251 (MQ=255) tttttAATTTGTCCACCCCTTAAAGGCCCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAATGGAGACATTctac < 1:354706/250‑1 (MQ=255) ttttAAATTGCCCCCACCTTCAATGCGCACCCCCCCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAATGGAGACATTctact < 1:74599/251‑1 (MQ=255) tttaaaaTTGTCCCCCCCTTCAATGCGCACCCCCCCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAATGGAGACATTctact < 1:537226/247‑1 (MQ=255) tttAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCg > 1:576206/1‑208 (MQ=255) gTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGTACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAATGGAGACATTCTACtaaaataaaa > 1:350386/1‑251 (MQ=255) ccTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTc > 1:340614/1‑213 (MQ=255) | CCGCCATGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAA‑C‑GGGGTGATA‑CGTACCGGGCTGTCGGGAAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAATGGAGACATTCTACTAAAATAAAA > 1/1708933‑1709409 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |