| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 2 | 118 | 0 | T | C | 48.1% | 67.1 / 19.4 | 54 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (1/27); new base C (26/0); total (27/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.88e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
‑‑‑‑‑‑‑‑‑‑‑‑GATGCAAGGCATTAATAGATAAAGCCAGATCAACTGCCGACGAAATCATTAGAGACCTAAAAAATTTAAAA‑GATACTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 2/1‑196 | aaaaaagaaaaggatgcaaggaattAATAGAAAAAGCCAGATCAACTGCCGAAGAAATCATAAGAGACCAAAAAAATTAAAAA‑GATCCTATTTTGTCCGTTGATACA‑GAAAAAGCTTTTCTAATAATTTCCCCACAGTGGAAACCGCAGCTACTGGAAAGTTTGCCGCCCCGAAAAGGGGGACTCCCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaacc > 1:770469‑M2/13‑208 (MQ=255)aaaaaagaaaaggatgaaaggaattAATAGATAAAGCCAGATCAACTGCCGACGAAATCATAAGAGACCAAAAAAATTAAAAA‑GATACTATTTGGCCCGTTGATACA‑GACAAAGCTTTTTTAATAATTTCCCCACAGTGGGAACCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGAACTCCCTGCTACCCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaacc > 1:928384‑M2/13‑208 (MQ=255) gaggaaaggaatTAATAAAAAAACCCAGATCATCTGCCGACGAAATCATTAGAGACATAAAAAATTTAAAA‑AATACTATTTTGTCCGTTGATACA‑GACAAAGCTTTTCTAATAATTTCCCCACAGTGGAAACCGCAGCTACTGAAAAGTTTGCCCCCCGGTAAAGCGGGACTACCTCCTCCTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagcc > 1:389194‑M2/6‑196 (MQ=255) gATGCAAGGCATTAATAGATAAAGCCAGATCAACTGCCGACGAAATCATTAGAGACCTAAAAAATTTAAAA‑GATACTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagac < 1:919177‑M2/206‑11 (MQ=255) ggCATTAATAGATAAAGCCAGATCAACTGCCGACGAAATCATTAGAGACCTAAAAAATTTAAAA‑GATACTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagc < 1:3065‑M2/242‑54 (MQ=255) aataaataaaaaaagccagatcaacTGCCGCCGAAATCATTAGAGCCATAAAAAATTTAAAA‑GATACTATTTTGTCCGTTGATACA‑GAAAAAGCGTTTCTAATAATTTCCCCACAGTGGGAACCGCAGCTACTGAAAAGTTTGCCGCCCCGAAAAGCGGGACTCCCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtg > 1:388126‑M2/12‑187 (MQ=255) aTTAATAAAAAAAGCCAGATCACCTCCCGACAAAATAATTAGAGACAAAAAAAATTAAAAA‑GATATTATTTTGTCCGTTGATAAA‑GAAAAAGCGTTTCTAATAATTTCCCCACAGGGGGAACCGCAGCTACTGGAAAGTTTGCCCCCCCGAAAAGCGGGACTCCCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgag > 1:622878‑M2/1‑186 (MQ=255) aTTAATAAAAAAAGCCAGATCAACTGCCGACAAAATCATTAGAGCCCAAAAAAATTAAAAA‑GATACTATTTTGTCCGTTGATACA‑GACAAAGCTTTTCTAATAATTTCCCCACAGTGGGAATCGCAGCTACTGAAAATTTTGCCGCCCCGTAAAGCGGGACTCCCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgag > 1:545698‑M2/1‑186 (MQ=255) taaataGATAAAGCCAGATCAACTGCCGACAAAATCATTAGAGACCAAAAAAATTTAAAA‑GATACTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTCCCCACAGGGGAAACCGCAGCTACTGGAAAGTTTGCCCCCCCGTAAAGCGGGACTCCCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagg > 1:494321‑M2/3‑185 (MQ=255) aaGCCAGATCAACTGCCGACAAAATCATTAGAGACATAAAAAATTTAAAA‑GATACTATTTTGTCCGTTGATACA‑GACAAAGCTTTTCTAATATTTTCCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGAAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttat > 1:299609‑M2/1‑175 (MQ=255) aaGCCAAATCAACTGCCGACAAAATCTTTAGAGACCTAAAAAATTAAAAA‑GATTCTATTTTGTCCGTTGATACA‑GACAAGGCGTTTCTAATAATTTCCCCACAGGGGGAACCGCAGCTACTGGAAAGTTGGCCCCCCGGTAAGGCGGACCTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttat > 1:239617‑M2/1‑175 (MQ=255) aGCCAGATCACCTGCCGACGAAATCATAAGAGACCAAAAAAATTAAAAA‑GATCCTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTCCCCACAGGGGGAATCGCAGCTACGGAAAAGTTTGCCGCCCCGTAAAGGGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaacca > 1:1039353‑M2/1‑174 (MQ=255) cccaGATCACCTGCCGACAAAATCATAAGAGACA‑AAAAAATTTAAAAAGATACTATTTTGTCGGTTGATACA‑GACAAAGCTTTTCAAATATTTTCCCCACAGTGGAAACCGCAGCTACTGAAAAGTTTGCCCCCCCGTAAAGCGGGACTACCTGCTCCTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttat > 1:520745‑M2/2‑173 (MQ=255) aaTCATAAGAGACCAAAAAAATTTAAAA‑GATCCTATTTTGTCCGTTGATACA‑GACAAAGCTTTTCTAATATTTTCCCCACAGTGGGAACCGCAGCTACTGGAAAGTTTGCCCCCCCGAAAAGCGGGACTCCCTGCTCCTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttat > 1:502875‑M2/1‑153 (MQ=255) ataattaGAGACCAAAAAAATTAAAAA‑GATCCTATTTTGTCCGTTGATACA‑GAAAAGGCGTTTCTAATATTTTCCCCACAGGGGAAACCGCAGCTACGGAAAAGTTTGCCCCCCCGTAAAGCGGGACTCCCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagc > 1:420817‑M2/4‑152 (MQ=255) aTCATTAGAGACCTAAAAAATTTAAAA‑GATACTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCAAATAATTTCCCCACAGTGGGAACCGCAGCTACTGGAAATTTTGCCCCCCCGAAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccc > 1:417251‑M2/1‑152 (MQ=255) tCATTAGAGACCTAAAAAATTTAAAA‑GATACTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatg < 1:643880‑M2/251‑101 (MQ=255) tCATTAGAGACCTAAAAAATTTAAAA‑GATACTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaa < 1:170076‑M2/237‑87 (MQ=255) tCATTAGAGACCTAAAAAATTTAAAA‑GATACTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttat < 1:790988‑M2/227‑77 (MQ=255) cATTAGAGACCTAAAAATTTTAAAA‑GATTTTATTTTGTCCGTTGATACA‑GACAAAGTGTTTCTAATAATTTCCCCACAGTGGGAATCGCAGCTTCTGGAAATTTTGCCGCCCCGTAAAGGGGGACTCCCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgt > 1:423133‑M2/1‑150 (MQ=255) cATTAGAGACCAAAAAAATTAAAAA‑GATACTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATATTTTCCCCACAGGGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGGGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgt > 1:79453‑M2/1‑150 (MQ=255) aataagagaccaAAAAAATTAAAAA‑GATCTTATTTTGCCCGTTAA‑ACAAGACAAAGCGTTTCTAATAATTTCCCCACAGGGGGAACCGCAGCTACTGAAAAGTTTGCCGCCCCGTAAAGGGGGACTCCCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgt > 1:303126‑M2/5‑150 (MQ=255) aatTAGAGACCAAAAAAATTTAAAA‑GATACTATTTTGTCCGTTGATACA‑AAAAAAGCTTTCCTAATAATTTCCCCACAGGGGGAACCGCAGCTACTGAAAAGTTTGCCCCCCCGAAAAGCGGGACTCCCTGCTCCTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgt > 1:257110‑M2/2‑150 (MQ=255) gaagatgtgtaaaagaaaca‑gatcctattttgtccgttaATACA‑GAAAAAGCGTTTCTAATAATTTCCCCACAGTGGGAATCGCAGCTACTGAAAAGTTTCCCCCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaa > 1:897697‑M2/20‑145 (MQ=255) aacCTAAAAAATTAAAAA‑GATCCTATTTTGTCCTTTGATACA‑GAAAAAGCTTTTCTAATAATTTCCCCCCAGGGGGAACCGCAGCTCCTGAAAAGTTTGCCGCCCCGTAAAGCGGAACTCCCTGCTCCTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatga > 1:969394‑M2/2‑143 (MQ=255) aaaaTTAAAAA‑AATACTATTTTGTCCGTTGATACA‑GACAAAGCTTTTCAAATAATTTCCCCACAGGGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGGGGGACTCCCTGCTCCTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatgaacaagaa > 1:547878‑M2/1‑136 (MQ=255) aTTTAAAA‑GATACTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaat < 1:451243‑M2/232‑100 (MQ=255) atatTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATATTTTCCCCACAGTGGGATCCGCAGCAACTGAAAAGTTTCCCGCCCCGAAAAGCGGGACTCCCTCCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatg > 1:903742‑M2/1‑124 (MQ=255) aTACTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttat < 1:85818‑M2/200‑77 (MQ=255) aTACTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcc < 1:546260‑M2/193‑70 (MQ=255) aTACTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtg < 1:370111‑M2/187‑64 (MQ=255) aTACTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtg < 1:279680‑M2/187‑64 (MQ=255) cTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatgaacaagaaaaacacgcgttttta < 1:412338‑M2/251‑131 (MQ=255) tttttgTCCGTTGATACA‑GAAAAAGCGTTTCTAATATTTTCCCCACAGGGGGAATCGCAGCTACTGAAAAGTTTCCCGCCCCGTAAAGCGGGACTCCCTGCTCCTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaacc > 1:902128‑M2/2‑119 (MQ=255) aTTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatgaacaagaaaaacacgcgtttttaaa < 1:753411‑M2/251‑133 (MQ=255) aTTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtg < 1:502030‑M2/182‑64 (MQ=255) aTTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtg < 1:793834‑M2/182‑64 (MQ=255) aTTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccc < 1:810617‑M2/157‑39 (MQ=255) aTTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtat < 1:613462‑M2/123‑5 (MQ=255) ccGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatgaacaagaaaaacacgcgtttttaaatggcaat < 1:705001‑M2/251‑140 (MQ=255) ccGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatgaacaagaaaaacacgcgtttttaaatggcaat < 1:196681‑M2/251‑140 (MQ=255) cGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatgaacaagaaaaacacgcgtttttaaatggcaatt < 1:1064724‑M2/251‑141 (MQ=255) cGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatgaacaagaaaaacacgcgtttttaaatggcaatt < 1:511000‑M2/251‑141 (MQ=255) cGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacg < 1:479763‑M2/172‑62 (MQ=255) gATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatgaacaagaaaaacacgcgtttttaaatggcaattacgg < 1:618366‑M2/251‑145 (MQ=255) gATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatgaacaagaaaaacacgcgtttttaaatggcaattacgg < 1:847246‑M2/251‑145 (MQ=255) gATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatct < 1:713584‑M2/113‑7 (MQ=255) gACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatgaacaagaaaaacacgcgtttttaaatggcaattacggtatga < 1:477176‑M2/250‑150 (MQ=255) aaaaaagctTTTCTAATATTTTCCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAGGCGGGACTCCCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaagg > 1:706067‑M2/4‑101 (MQ=255) aaGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatgaacaagaaaaacacgcgtttttaaatggcaattac < 1:440602‑M2/239‑143 (MQ=255) cGTTTCAAATAATTTCCCCACAGGGGGAATCCCAGCTACTGGAAAGTTTGCCCCCCCGAAAAGCGGGACTCCCTGCTACCCCCGCCGATGTATCgtatctagacaaatacaaggcaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatgaacaagaaaaacacgcgtttttaaatggcaattacggtatgacgcaatcg > 1:369850‑M2/1‑94 (MQ=255) tttaataattTCCCCCCAGGGGGAACCCCACCTACTGAAAATTTTGCCCCCCCGAAAAGCGGACCTACCTCCTCCCCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaacccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatgaacaagaaaaacacgcgtttttaaatggcaattacggtatgacgcaatcggggga > 1:598660‑M2/3‑90 (MQ=255) cTAATAATTTTCCCACAGGGGGAACCGCAGCTACGGGAAAGTTGCCCGCCCCGAAAAGGGGGACTCCCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaat > 1:209824‑M2/1‑89 (MQ=255) ttttccCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCCCCCCGTAAAGGGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatgaacaagaaaaacacgcgtttttaaatggcaattacggtatgacgcaatcgggggataagtg > 1:1015369‑M2/2‑83 (MQ=255) ttttccCCACAGTGGGAACCGCAGCTACTGGAAAGTTTGCCCCCCCGTAAAGCGGGACTACCTGCTCCTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatgaacaagaaaaacacgcgtttttaaatggcaattacggtatgacgcaatcgggggataagtg > 1:604657‑M2/2‑83 (MQ=255) atTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagacaaatacaagccaaagaaataaacaaccctaaccaaccccaagccctccacgtgagggcctttttattactcaaaaaaggacaataaaatgttgaatgaacaagaaaaacacgcgtttttaaatggcaattacggtatgacgcaatcgggggataagtg < 1:474476‑M2/251‑169 (MQ=255) ttCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATCgtatctagac < 1:329015‑M2/90‑11 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑GATGCAAGGCATTAATAGATAAAGCCAGATCAACTGCCGACGAAATCATTAGAGACCTAAAAAATTTAAAA‑GATACTATTTTGTCCGTTGATACA‑GACAAAGCGTTTCTAATAATTTTCCCACAGTGGGAATCGCAGCTACTGGAAAGTTTGCCGCCCCGTAAAGCGGGACTACCTGCTACTCCCGCCGATGTATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 2/1‑196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |