| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,555,360 | 0 | A | C | 45.1% | 140.7 / 29.6 | 82 | intergenic (‑39238/‑10704) | unknown/unknown | tRNA‑Arg‑CCG/tRNA‑Asn‑GTT |
| Reads supporting (aligned to +/- strand): ref base A (40/5); new base C (0/37); total (40/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.98e-18 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ATGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAAC‑GGGG‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAAT > 1/1555119‑1555604 | aTGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAAC‑GGGG‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAAccccgccgc < 1:157698/251‑1 (MQ=255) tGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAAC‑GGGG‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAAccccgccgcc < 1:970500/251‑1 (MQ=255) tGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAAC‑GGGG‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACAGATGATCGGCACATTTACGGTCGGGCGCCCGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAAccccgcccc > 1:878222/1‑248 (MQ=255) aaGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAAC‑GGGG‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAAccccgccgccccg > 1:459001/1‑250 (MQ=255) ccATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAAC‑GGGG‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAAccccgccgcc < 1:103489/239‑1 (MQ=255) tttCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAAC‑GGGG‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGaa > 1:371488/1‑251 (MQ=255) ttCAAGAATTTTTTTAACCGCACTTAAAATCCCTCCCGGGCGCGGGCGACGAGTCCCATCCACGGCGATATTGTCCGCTCCGGCGTGCGCCAAGTCTTCAATTTCCTGTAAAAAG‑GGGG‑TGATACGTACCGGGCTGTCGGG‑AAGACCCCGTTTGACGATACCGATGATCGGCACTTTTACGGTCGGGCGCGGGGTTTTTAATTTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAg < 1:318162/251‑1 (MQ=255) acccGCCCTTTCACTCCCTCCCGGGCGCGGGCGACGAGTGCCACCCCGGGCGATAATGCCCGCTCCGGCGTGCGCCAAGTCTAAAATGTCCTG‑AAAAACGGGGG‑TGATACGTCCGGGGCTGTCGGG‑AAGACCCCGTTTGACGATCCCGATGACCGGCACATTTACGGTCGGGCGCACGGTTTTTAAATTGCCCCCCCC‑TTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATagcag < 1:49070/249‑1 (MQ=255) tcaacccctcccGGGCGCGGGCGAGGAGTGCCACCCACGGCGATAATGCCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGAAAAACC‑GGGG‑TGATACGTACGGGGCTGTCGGG‑AAGATCCCTTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCCCGGTTTTTAAATTGTCCCCCCC‑TTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTc < 1:914669/241‑1 (MQ=255) tctctcCCGGGCGGGGGCGACGAGTGCCACCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAAC‑GGGG‑TGATCCGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGTTTTAAAATTGTCCACCCC‑TTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATag < 1:278269/234‑1 (MQ=255) tctcTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAAC‑GGGG‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGt > 1:172904/1‑251 (MQ=255) ctcccGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGCCCGCTCGGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAAC‑GGGG‑TGATACGTACGGGGCTGTGGGG‑AAGACCCCGTTTGACGATCCCGATGATCGGCACTTTTCGGGTGGGGCGCACGGTTTTTAAATTGTCCACCCC‑TTCAATGCGCACCCCCCCCGCCCCGCCGATAACGGAAGCCTGCGCCATagc < 1:1075370/229‑1 (MQ=255) aCCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAAC‑GGGG‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTAt > 1:119886/1‑250 (MQ=255) ccGGCCGCGGGCTACGAGTCCCACCCCCGGCAATAATGCCCCCCCCGGCGCGCGCAAAGTTTTCAATTCCCTGAAAAACC‑GGGT‑TAATCCGTCCCGGGTTGTCGGA‑AAGCCCCCTTTTGCCGATCCCAATACCCGGCACTTTTACGGCCGGGCCCCCTTC‑TTTAAATTTCCCCCCCCTTTCAATGCCCACCCCCCCCCCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATcc < 1:173030/251‑1 (MQ=255) cgacgaGTGCCACCCCCGGCAATAAGGTCCCCCCGGGCGGGCGCAAAGTCTTCATTGTCCTGAAAAAAG‑GGGG‑TGATACGTCCCGGGTTGGCGGG‑AAGACCCCGTTTGACAATCCCGATGACCGGCCCATTTCCGGTCGGGCGCAGGGTTTTTAAATTGCCCACCCC‑TTAAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACcat < 1:1006149/250‑1 (MQ=255) cgaGTCCCACCCCCGGCGATAATGCCCGCCCGGGCGTGCCCAAAGTCTTAATTGTCCTGAAAAACC‑GGGG‑TGATCCGTCCGGGGCTGTGGGG‑AAGACCCCTTTTGACAATCCCGATGACCGCCAATTTTCCGGTCGGGCGCCCGGTTTTTAATTTGCCCACCCC‑TTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCatcatc < 1:523392/251‑1 (MQ=255) ggTGCCCTCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGAAAAAAC‑GGGG‑TGATCCGTCCCGGGCTGTCGGG‑AAGACCCCTTTTGACGATCCCGATGATCGCCACATTTACGGTGGGGCGCACGGCTTTTAAATTGCCCACCCC‑TTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATcc < 1:1076945/249‑1 (MQ=255) aGTGCCACCCACGGCGATAATGCCCGCTCCGGCGTGCGCCAGGTCTTCAATGTCCTGTAAAAAC‑GGGG‑TGATACGTACCGGGCTGTGGGG‑AAGATCCCGTTTGACGATCCCGATGACCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGCCCACCCC‑TTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATcc < 1:173699/250‑1 (MQ=255) cacccACGGCAATAATGCCCGCCCCGGCGGGCCCCAAGTCTTCAATGTCCTGTAAAAAC‑GGGG‑TGATCCGTCCCGGGCTGTGGGG‑AAGACCCCTTTTGACGATCCCGATGACCGGCACTTTTACGGTGGGGCGCCCGGTTTTTAATTTGTCCACCCC‑TTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGc < 1:129256/248‑1 (MQ=255) gTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAAC‑GGGG‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTa > 1:79039/1‑251 (MQ=255) cgccccGGCGTGCGCCAAGTCTTCAATGTCCTG‑AAAAACGGGGG‑TGATACGTCCCGGGCTGGGGGG‑AAGACCCCGTTTGACGATCCCGATGATCGGCACATTTACGGGCGGGCGCAGGGTTTTAAAATTGTCCACCCC‑TCAAATGCGCACCCCCCCCCCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATc < 1:132490/247‑1 (MQ=255) cccccGGCGTGCCCAAAGTCTTCAATGCCCTGAAAAAAC‑GGGG‑TAAACCGTCCCGGGCTGTGGGG‑AAGACCCCGTTTGACAATACCGATGATCGGCACATTGCCGGTCGGGCCCCCGGTTTTAAAATTCCCCCCCCC‑TACAATGCCCACCCCCCCCGCCCCGCCGATAACTGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATcc < 1:348676/248‑1 (MQ=255) ccccccAAGTCTCCAATTTCCTG‑AAAAAC‑GGGGTTAATCCGTCCGGGGCTG‑CGGGAAAGACCCCTTTGGACGATCCCGATGACCGCCCCTTTTACGGCGGGGCCCACGGTTTTAAAATTGCCCCCCCC‑TTCAAGGCCCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAg < 1:595524/247‑1 (MQ=255) gTCTTCAATGTCCTGTAAAAAC‑GGGG‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGa > 1:531934/1‑251 (MQ=255) tCTTCAATGCCCTGAAAAAAC‑GGGG‑TGATACGTCCCGGGCGGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGTTTTTTAATTTGCCCACCCC‑TTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCg < 1:464182/249‑1 (MQ=255) tCAATGTCCTGTAAAAAC‑GGGG‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGaaaa > 1:574203/1‑250 (MQ=255) ccAATGTCCTGAAAAAAC‑GGGG‑TGATCCGTCCCGGGCTGGGGGG‑AAGACCCCTTTTGACGATCCCGATGCTCGGCACATTTCCGGTCGGGCGCCCGGTTTTAAAATTGCCCACCCC‑TCCAATGCGCACCCCCCCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAAc < 1:1025332/250‑1 (MQ=255) gTCCTGTAAAAAC‑GGGG‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAg > 1:54658/1‑234 (MQ=255) cTGTAAAAAC‑GGGG‑TAAAACGTCCCGGGCTGTCGGA‑AAGACCCCTTTTGACGTTCCCGATGATCGGCACATTTCCGGGCGGGCGCACGGTTTTTAAATTGTCCACCCC‑TCCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTc < 1:894234/226‑1 (MQ=255) aaC‑GGGG‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAAc > 1:803036/1‑236 (MQ=255) ggg‑TGATCCGTCCCGGGCTGTCGGG‑AAGACCCCGTTTGACGATCCCGATGATCGGCACATTTACGGTCGGGCGCCCGGTTTTTAAATTGTCCACCCC‑TTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACa < 1:1038195/155‑1 (MQ=255) ggg‑TGATCCGTACCGGGCTGTGGGG‑AAGATCCCTTTTGACGATCCCGATGATCGGCACATTTACGGTCGGGCCCCCGGTTTTTAATTTCCCCACCCC‑TTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGc < 1:235079/191‑1 (MQ=255) ggg‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAAtttt > 1:1031591/1‑251 (MQ=255) gg‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAAttttt > 1:54495/1‑251 (MQ=255) g‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATcc > 1:997173/1‑168 (MQ=255) gATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTgag > 1:1040243/1‑251 (MQ=255) aTACGTACCGGGCTGGCGGG‑AAGACCCCTTTGGCCAATACCGATGACCGGCACATTACCGGTGGGGCGCCCGGCTTTAAATTTGCCCACACC‑TTCAAGGCCCACCCCCCCCCCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTgag < 1:1048517/250‑1 (MQ=255) cGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAg > 1:341748/1‑251 (MQ=255) gtcccGGGCTGTCGGG‑AAGACCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCCCGGTTTTTAAATTGTCCCCCCC‑TTAAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTgcgc < 1:115761/130‑1 (MQ=255) gTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAg > 1:729500/1‑250 (MQ=255) gTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAg > 1:714372/1‑250 (MQ=255) gTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAg > 1:623800/1‑250 (MQ=255) gTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGCTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAg > 1:1048866/1‑250 (MQ=255) gTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCCGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAGAACGGCTTGATGAGATAATTTTTGAGATAg > 1:740761/1‑250 (MQ=255) gCTGTGGGG‑AAGACCCCGTTGGACAATCCGGATGACCGCCACATTTCCGGCGGGGCGCACGGTTTTTAATTTGTCCACCCC‑TTCGTTGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGAc < 1:622309/250‑1 (MQ=255) gCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAATTTGTCCACCCC‑TCAAATGCGCACCCCCCCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGAc < 1:875294/250‑1 (MQ=255) gcggcgggaaaGACCCCGTTTGCCGATACCGATGATCGCCCCTTTTCCGGTGGGGCGCACGGTTTTTAAATTGCCCACCCC‑TTCAAGGCCCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGAc < 1:317021/241‑1 (MQ=255) gTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAAc < 1:521041/91‑1 (MQ=255) gTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAag > 1:1036587/1‑179 (MQ=255) gTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAg > 1:763966/1‑251 (MQ=255) gTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAg > 1:968473/1‑251 (MQ=255) ccGTTTGCCGATACCGATGACCGCCCCATTTCCGGCGGGGCGCCCGCCTTTAAATTTGCCCCCCCC‑TCCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCttt < 1:395776/251‑1 (MQ=255) ccGTTTGACGATACCGATGACCGGCACATTTACGGTGGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAAGGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCttt < 1:880182/251‑1 (MQ=255) aTACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCatcatc > 1:1052634/1‑143 (MQ=255) aCCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCa > 1:752527/1‑251 (MQ=255) aCCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCa > 1:196726/1‑251 (MQ=255) ccGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCAt > 1:337747/1‑251 (MQ=255) atCGGCACATTTCCGGTCGGGCGCCCGGTTTTTAAATTGCCCACCCC‑TCCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGATACTCCTCTTTTTTGCGGCTGCATTTGGc < 1:1076195/250‑1 (MQ=255) gCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCa > 1:1041662/1‑251 (MQ=255) caTTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCAtt > 1:76975/1‑250 (MQ=255) ttgcGGTGGGGCGCACGGTTTTTAATTTGCCCACCCC‑TTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAg < 1:143110/248‑1 (MQ=255) ccggccGGGCGCAGGGTTTTTAAATTGCCCACCCC‑TTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTc < 1:1038762/246‑1 (MQ=255) ccGGTGGGGCGCCCGGTTTTTAATTTGCCCCCTCC‑TTAAATGCCCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTc < 1:443317/250‑1 (MQ=255) ccGGTCGGGCGCACGGCTTTTAAATTGTCCACCCC‑TCCAATCCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTc < 1:233866/250‑1 (MQ=255) gggTCGGCCGCACGGTTTTTAATTTTCCCACCTC‑TTCACTGCCCACCCCCCCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTc < 1:899128/249‑1 (MQ=255) ggTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGc > 1:223081/1‑236 (MQ=255) gggCCCACGGCTTTTAAATTGCCCCCCCC‑TTAAAGGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTgg < 1:1060077/250‑1 (MQ=255) ggCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTTCTTCTAGTCAGTGgag > 1:604306/1‑251 (MQ=255) ccccggtttttAAATTGCCCCCCCC‑TTCAACCCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACa < 1:135624/244‑1 (MQ=255) ccacgtttttaaaattgcccccccc‑TTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACa < 1:111567/228‑1 (MQ=255) gCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTcta > 1:584369/1‑251 (MQ=255) ttttaaattccccccccctcaaaTGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTctact < 1:919439/230‑1 (MQ=255) gcccccccc‑TTCAATGCCCACCCCCGCCCCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTTGTCAGTGGAGACAt < 1:1010637/229‑1 (MQ=255) gTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACa > 1:458651/1‑235 (MQ=255) gTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACtaaaataaaa > 1:756291/1‑251 (MQ=255) ccACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAag > 1:779599/1‑108 (MQ=255) cacC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCa > 1:524842/1‑251 (MQ=255) cc‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAg > 1:282222/1‑125 (MQ=255) cc‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTctact > 1:76382/1‑235 (MQ=255) cc‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCAtt > 1:518192/1‑251 (MQ=255) cc‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCAtt > 1:169511/1‑251 (MQ=255) tGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAat < 1:116040/251‑1 (MQ=255) | ATGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAAC‑GGGG‑TGATACGTACCGGGCTGTCGGG‑AAGATCCCGTTTGACGATACCGATGATCGGCACATTTACGGTCGGGCGCACGGCTTTTAAATTGTCCACACC‑TTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATCATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATTTCATTTTAAAAT > 1/1555119‑1555604 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |